RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 BRCA1P38398 1863 aaKnown RBP14.05□□□□□ -0.16
TRIM40-208ENST00000489892 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
TRIM40-208ENST00000489892 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-208ENST00000489892 SGSM2O43147 1006 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 FRAT2O75474 233 aaPredicted RBP14.04□□□□□ -0.16
TRIM40-208ENST00000489892 UFL1O94874 794 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 MCAMP43121 646 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 MAP3K12Q12852 859 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 WASHC4Q2M389 1173 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 ARHGAP27Q6ZUM4 889 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 FBXO33Q7Z6M2 555 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 ZGPATQ8N5A5 531 aaKnown RBP14.04□□□□□ -0.16
TRIM40-208ENST00000489892 HELLSQ9NRZ9 838 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 MED23Q9ULK4 1368 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 ARFGEF1Q9Y6D6 1849 aa14.04□□□□□ -0.16
TRIM40-208ENST00000489892 BCAMP50895 628 aa14.03□□□□□ -0.16
TRIM40-208ENST00000489892 RASGRF1Q13972 1273 aa14.03□□□□□ -0.16
TRIM40-208ENST00000489892 DPP8Q6V1X1 898 aaPredicted RBP14.03□□□□□ -0.16
TRIM40-208ENST00000489892 MPNDQ8N594 471 aa14.03□□□□□ -0.16
TRIM40-208ENST00000489892 SUPT20HQ8NEM7 779 aa14.03□□□□□ -0.16
TRIM40-208ENST00000489892 SNRKQ9NRH2 765 aa14.03□□□□□ -0.16
TRIM40-208ENST00000489892 DLEC1Q9Y238 1755 aa14.02□□□□□ -0.16
TRIM40-208ENST00000489892 COL4A1P02462 1669 aa14.02□□□□□ -0.16
TRIM40-208ENST00000489892 RNF113AO15541 343 aaKnown RBP14.02□□□□□ -0.17
TRIM40-208ENST00000489892 TOMM70O94826 608 aa14.02□□□□□ -0.17
TRIM40-208ENST00000489892 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
TRIM40-208ENST00000489892 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
TRIM40-208ENST00000489892 DPEP1P16444 411 aa14.02□□□□□ -0.17
TRIM40-208ENST00000489892 ZAP70P43403 619 aa14.02□□□□□ -0.17
TRIM40-208ENST00000489892 RBM25P49756 843 aaKnown RBP14.02□□□□□ -0.17
TRIM40-208ENST00000489892 GPSM2P81274 684 aa14.02□□□□□ -0.17
TRIM40-208ENST00000489892 SPTY2D1Q68D10 685 aaPredicted RBP14.02□□□□□ -0.17
TRIM40-208ENST00000489892 PRPF40BQ6NWY9 871 aaKnown RBP14.02□□□□□ -0.17
TRIM40-208ENST00000489892 CWC27Q6UX04 472 aaKnown RBP14.02□□□□□ -0.17
TRIM40-208ENST00000489892 TTLL6Q8N841 843 aa14.02□□□□□ -0.17
TRIM40-208ENST00000489892 FAM84BQ96KN1 310 aaPredicted RBP14.02□□□□□ -0.17
TRIM40-208ENST00000489892 ANO2Q9NQ90 1003 aa14.02□□□□□ -0.17
TRIM40-208ENST00000489892 HMG20BQ9P0W2 317 aa14.02□□□□□ -0.17
TRIM40-208ENST00000489892 C6orf229H3BNL8 230 aa14.01□□□□□ -0.17
TRIM40-208ENST00000489892 SEC24BO95487 1268 aa14.01□□□□□ -0.17
TRIM40-208ENST00000489892 GYG1P46976 350 aa14.01□□□□□ -0.17
TRIM40-208ENST00000489892 UBE3CQ15386 1083 aa14.01□□□□□ -0.17
TRIM40-208ENST00000489892 MCMDC2Q4G0Z9 681 aa14.01□□□□□ -0.17
TRIM40-208ENST00000489892 TBC1D16Q8TBP0 767 aa14.01□□□□□ -0.17
TRIM40-208ENST00000489892 WDR66Q8TBY9 1149 aa14.01□□□□□ -0.17
TRIM40-208ENST00000489892 AKAP11Q9UKA4 1901 aa14.01□□□□□ -0.17
TRIM40-208ENST00000489892 ANAPC15P60006 121 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 NMIQ13287 307 aaPredicted RBP14□□□□□ -0.17
TRIM40-208ENST00000489892 SCARF1Q14162 830 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 NFKBIBQ15653 356 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 RNF20Q5VTR2 975 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 RTKN2Q8IZC4 609 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 TBC1D22AQ8WUA7 517 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 APPBP2Q92624 585 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 ZC3H12CQ9C0D7 883 aaKnown RBP14□□□□□ -0.17
TRIM40-208ENST00000489892 COA1Q9GZY4 146 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 LRP2BPQ9P2M1 347 aa14□□□□□ -0.17
TRIM40-208ENST00000489892 SALL1Q9NSC2 1324 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 G3V3G9 751 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 IDH1O75874 414 aaKnown RBP13.99□□□□□ -0.17
TRIM40-208ENST00000489892 CYP2E1P05181 493 aaPredicted RBP13.99□□□□□ -0.17
TRIM40-208ENST00000489892 CCDC93Q567U6 631 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 ZMYM1Q5SVZ6 1142 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 DCAF8Q5TAQ9 597 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 USP26Q9BXU7 913 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 VPS33BQ9H267 617 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 PIM2Q9P1W9 311 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 MYH7P12883 1935 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 MYH13Q9UKX3 1938 aa13.99□□□□□ -0.17
TRIM40-208ENST00000489892 LTBP1Q14766 1721 aa13.98□□□□□ -0.17
TRIM40-208ENST00000489892 CCDC171Q6TFL3 1326 aa13.98□□□□□ -0.17
TRIM40-208ENST00000489892 IRS2Q9Y4H2 1338 aa13.98□□□□□ -0.17
TRIM40-208ENST00000489892 SNAP23O00161 211 aa13.98□□□□□ -0.17
TRIM40-208ENST00000489892 CHRNA5P30532 468 aa13.98□□□□□ -0.17
TRIM40-208ENST00000489892 DALRD3Q5D0E6 543 aaKnown RBP13.98□□□□□ -0.17
TRIM40-208ENST00000489892 SLC9C2Q5TAH2 1124 aa13.98□□□□□ -0.17
TRIM40-208ENST00000489892 CERS3Q8IU89 383 aa13.98□□□□□ -0.17
TRIM40-208ENST00000489892 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
TRIM40-208ENST00000489892 EDC3Q96F86 508 aaKnown RBP13.98□□□□□ -0.17
TRIM40-208ENST00000489892 DOCK2Q92608 1830 aa13.97□□□□□ -0.17
TRIM40-208ENST00000489892 IL1R1P14778 569 aa13.97□□□□□ -0.17
TRIM40-208ENST00000489892 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-208ENST00000489892 ADD2P35612 726 aa13.97□□□□□ -0.17
TRIM40-208ENST00000489892 C9orf131Q5VYM1 1079 aa13.97□□□□□ -0.17
TRIM40-208ENST00000489892 FAM227BQ96M60 508 aa13.97□□□□□ -0.17
TRIM40-208ENST00000489892 RTFDC1Q9BY42 306 aaPredicted RBP13.97□□□□□ -0.17
TRIM40-208ENST00000489892 ANTXR1Q9H6X2 564 aa13.97□□□□□ -0.17
TRIM40-208ENST00000489892 CD209Q9NNX6 404 aa13.97□□□□□ -0.17
TRIM40-208ENST00000489892 POLLQ9UGP5 575 aa13.97□□□□□ -0.17
TRIM40-208ENST00000489892 A0A0D9SFI3 127 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 PDE6AP16499 860 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 GSTO1P78417 241 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 RABEP1Q15276 862 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 PI16Q6UXB8 463 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 SLF2Q8IX21 1173 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 DSCC1Q9BVC3 393 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 NMRK2Q9NPI5 230 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 PIH1D3Q9NQM4 214 aaKnown RBP13.96□□□□□ -0.17
TRIM40-208ENST00000489892 CTNNA3Q9UI47 895 aa13.96□□□□□ -0.17
TRIM40-208ENST00000489892 SUGT1Q9Y2Z0 365 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms