RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 IL1R1P14778 569 aa19.13■□□□□ 0.65
FAM3D-204ENST00000489857 IFIT5Q13325 482 aaKnown RBP19.13■□□□□ 0.65
FAM3D-204ENST00000489857 MAP3K11Q16584 847 aa19.13■□□□□ 0.65
FAM3D-204ENST00000489857 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
FAM3D-204ENST00000489857 FBXO46Q6PJ61 603 aaPredicted RBP19.13■□□□□ 0.65
FAM3D-204ENST00000489857 CLMNQ96JQ2 1002 aa19.13■□□□□ 0.65
FAM3D-204ENST00000489857 AOX1Q06278 1338 aa19.13■□□□□ 0.65
FAM3D-204ENST00000489857 F6X3S4 739 aa19.12■□□□□ 0.65
FAM3D-204ENST00000489857 F8W031 263 aaPredicted RBP19.12■□□□□ 0.65
FAM3D-204ENST00000489857 CFAP100Q494V2 611 aa19.12■□□□□ 0.65
FAM3D-204ENST00000489857 EPHA10Q5JZY3 1008 aa19.12■□□□□ 0.65
FAM3D-204ENST00000489857 BEND3Q5T5X7 828 aa19.12■□□□□ 0.65
FAM3D-204ENST00000489857 CHMP3Q9Y3E7 222 aa19.12■□□□□ 0.65
FAM3D-204ENST00000489857 PPP2R3BQ9Y5P8 575 aa19.12■□□□□ 0.65
FAM3D-204ENST00000489857 A0A1B0GUL6 1792 aa19.11■□□□□ 0.65
FAM3D-204ENST00000489857 CLRN2A0PK11 232 aa19.11■□□□□ 0.65
FAM3D-204ENST00000489857 SPDYE2BA6NHP3 402 aa19.11■□□□□ 0.65
FAM3D-204ENST00000489857 SPDYE6P0CI01 402 aa19.11■□□□□ 0.65
FAM3D-204ENST00000489857 EXOSC9Q06265 439 aaKnown RBP19.11■□□□□ 0.65
FAM3D-204ENST00000489857 PRPF38BQ5VTL8 546 aaKnown RBP19.11■□□□□ 0.65
FAM3D-204ENST00000489857 ZNF804AQ7Z570 1209 aa19.11■□□□□ 0.65
FAM3D-204ENST00000489857 SLC10A4Q96EP9 437 aa19.11■□□□□ 0.65
FAM3D-204ENST00000489857 PRMT6Q96LA8 375 aaPredicted RBP19.11■□□□□ 0.65
FAM3D-204ENST00000489857 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.11■□□□□ 0.65
FAM3D-204ENST00000489857 JAG2Q9Y219 1238 aa19.11■□□□□ 0.65
FAM3D-204ENST00000489857 MANSC4A6NHS7 340 aaPredicted RBP19.1■□□□□ 0.65
FAM3D-204ENST00000489857 ALDH1A1P00352 501 aa19.1■□□□□ 0.65
FAM3D-204ENST00000489857 FKBP1AP62942 108 aaKnown RBP19.1■□□□□ 0.65
FAM3D-204ENST00000489857 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
FAM3D-204ENST00000489857 IFNL1Q8IU54 200 aa19.1■□□□□ 0.65
FAM3D-204ENST00000489857 WNK4Q96J92 1243 aa19.1■□□□□ 0.65
FAM3D-204ENST00000489857 ZNF594Q96JF6 807 aaPredicted RBP19.1■□□□□ 0.65
FAM3D-204ENST00000489857 IGF2BP3O00425 579 aaKnown RBP eCLIP19.09■□□□□ 0.65
FAM3D-204ENST00000489857 PPP1R12BO60237 982 aaPredicted RBP19.09■□□□□ 0.65
FAM3D-204ENST00000489857 ZBTB48P10074 688 aaPredicted RBP19.09■□□□□ 0.65
FAM3D-204ENST00000489857 INHBEP58166 350 aa19.09■□□□□ 0.65
FAM3D-204ENST00000489857 NBPF12Q5TAG4 269 aaPredicted RBP19.09■□□□□ 0.65
FAM3D-204ENST00000489857 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
FAM3D-204ENST00000489857 WDR63Q8IWG1 891 aa19.08■□□□□ 0.64
FAM3D-204ENST00000489857 VEZTQ9HBM0 779 aa19.08■□□□□ 0.64
FAM3D-204ENST00000489857 GRM8O00222 908 aa19.07■□□□□ 0.64
FAM3D-204ENST00000489857 MYO1BO43795 1136 aa19.07■□□□□ 0.64
FAM3D-204ENST00000489857 PLIN1O60240 522 aa19.07■□□□□ 0.64
FAM3D-204ENST00000489857 GJA5P36382 358 aa19.07■□□□□ 0.64
FAM3D-204ENST00000489857 SUPT20HL1Q3ZLR7 823 aa19.07■□□□□ 0.64
FAM3D-204ENST00000489857 LDHAL6AQ6ZMR3 332 aa19.07■□□□□ 0.64
FAM3D-204ENST00000489857 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
FAM3D-204ENST00000489857 ECM29Q5VYK3 1845 aa19.07■□□□□ 0.64
FAM3D-204ENST00000489857 FAM205AQ6ZU69 1335 aa19.06■□□□□ 0.64
FAM3D-204ENST00000489857 UNCXA6NJT0 531 aa19.06■□□□□ 0.64
FAM3D-204ENST00000489857 USP2O75604 605 aaPredicted RBP19.06■□□□□ 0.64
FAM3D-204ENST00000489857 RASA3Q14644 834 aa19.06■□□□□ 0.64
FAM3D-204ENST00000489857 CCDC57Q2TAC2 916 aa19.06■□□□□ 0.64
FAM3D-204ENST00000489857 PCDH10Q9P2E7 1040 aa19.06■□□□□ 0.64
FAM3D-204ENST00000489857 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
FAM3D-204ENST00000489857 RBM5P52756 815 aaKnown RBP eCLIP19.05■□□□□ 0.64
FAM3D-204ENST00000489857 TAF7LQ5H9L4 462 aa19.05■□□□□ 0.64
FAM3D-204ENST00000489857 OTOP1Q7RTM1 612 aa19.05■□□□□ 0.64
FAM3D-204ENST00000489857 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
FAM3D-204ENST00000489857 CNNM1Q9NRU3 951 aa19.05■□□□□ 0.64
FAM3D-204ENST00000489857 TRIM17Q9Y577 477 aa19.05■□□□□ 0.64
FAM3D-204ENST00000489857 LAMB1P07942 1786 aa19.04■□□□□ 0.64
FAM3D-204ENST00000489857 IREB2P48200 963 aaKnown RBP19.04■□□□□ 0.64
FAM3D-204ENST00000489857 TDRD7Q8NHU6 1098 aaKnown RBP19.04■□□□□ 0.64
FAM3D-204ENST00000489857 GYG1P46976 350 aa19.03■□□□□ 0.64
FAM3D-204ENST00000489857 SPDYE2Q495Y8 402 aa19.03■□□□□ 0.64
FAM3D-204ENST00000489857 MFSD14BQ5SR56 506 aa19.03■□□□□ 0.64
FAM3D-204ENST00000489857 ANKRD13AQ8IZ07 590 aa19.03■□□□□ 0.64
FAM3D-204ENST00000489857 ZNF70Q9UC06 446 aaPredicted RBP19.03■□□□□ 0.64
FAM3D-204ENST00000489857 CRHR2Q13324 411 aa19.02■□□□□ 0.64
FAM3D-204ENST00000489857 CDAN1Q8IWY9 1227 aa19.02■□□□□ 0.64
FAM3D-204ENST00000489857 FAM84BQ96KN1 310 aaPredicted RBP19.02■□□□□ 0.64
FAM3D-204ENST00000489857 PTPN18Q99952 460 aa19.02■□□□□ 0.64
FAM3D-204ENST00000489857 PUS3Q9BZE2 481 aaKnown RBP19.02■□□□□ 0.64
FAM3D-204ENST00000489857 C9orf78Q9NZ63 289 aaPredicted RBP19.02■□□□□ 0.64
FAM3D-204ENST00000489857 SERPINA10Q9UK55 444 aa19.02■□□□□ 0.64
FAM3D-204ENST00000489857 TTF2Q9UNY4 1162 aaKnown RBP19.02■□□□□ 0.64
FAM3D-204ENST00000489857 TESPA1A2RU30 521 aaPredicted RBP19.01■□□□□ 0.63
FAM3D-204ENST00000489857 ALDH1L1O75891 902 aa19.01■□□□□ 0.63
FAM3D-204ENST00000489857 HIBADHP31937 336 aaKnown RBP19.01■□□□□ 0.63
FAM3D-204ENST00000489857 UBE4AQ14139 1066 aa19.01■□□□□ 0.63
FAM3D-204ENST00000489857 CD99L2Q8TCZ2 262 aa19.01■□□□□ 0.63
FAM3D-204ENST00000489857 KAZALD1Q96I82 304 aa19.01■□□□□ 0.63
FAM3D-204ENST00000489857 SUCLG2Q96I99 432 aa19.01■□□□□ 0.63
FAM3D-204ENST00000489857 TDRD3Q9H7E2 651 aaKnown RBP19.01■□□□□ 0.63
FAM3D-204ENST00000489857 CAP1Q01518 475 aa19■□□□□ 0.63
FAM3D-204ENST00000489857 TNFAIP1Q13829 316 aa19■□□□□ 0.63
FAM3D-204ENST00000489857 ERO1AQ96HE7 468 aa19■□□□□ 0.63
FAM3D-204ENST00000489857 TEPSINQ96N21 525 aa19■□□□□ 0.63
FAM3D-204ENST00000489857 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
FAM3D-204ENST00000489857 ELP3Q9H9T3 547 aa19■□□□□ 0.63
FAM3D-204ENST00000489857 OTOFQ9HC10 1997 aa18.99■□□□□ 0.63
FAM3D-204ENST00000489857 POTEFA5A3E0 1075 aa18.99■□□□□ 0.63
FAM3D-204ENST00000489857 GRIK5Q16478 980 aa18.99■□□□□ 0.63
FAM3D-204ENST00000489857 OTUD7BQ6GQQ9 843 aa18.99■□□□□ 0.63
FAM3D-204ENST00000489857 SLC4A10Q6U841 1118 aa18.99■□□□□ 0.63
FAM3D-204ENST00000489857 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.99■□□□□ 0.63
FAM3D-204ENST00000489857 DZIP1LQ8IYY4 767 aaKnown RBP18.99■□□□□ 0.63
FAM3D-204ENST00000489857 OPTNQ96CV9 577 aa18.99■□□□□ 0.63
FAM3D-204ENST00000489857 PTPN22Q9Y2R2 807 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms