RNA–Protein interactions for RNA: ENST00000489856.1

CAV1-208, Transcript of caveolin 1, humanhuman

TSL 2

Gene CAV1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAV1-208ENST00000489856 USP44Q9H0E7 712 aa12.11□□□□□ -0.47
CAV1-208ENST00000489856 SEC31BQ9NQW1 1179 aa12.11□□□□□ -0.47
CAV1-208ENST00000489856 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
CAV1-208ENST00000489856 PNMA3Q9UL41 463 aa12.11□□□□□ -0.47
CAV1-208ENST00000489856 SNED1Q8TER0 1413 aa12.11□□□□□ -0.47
CAV1-208ENST00000489856 OATP04181 439 aa12.1□□□□□ -0.47
CAV1-208ENST00000489856 NBPF7P0C2Y1 421 aaPredicted RBP12.1□□□□□ -0.47
CAV1-208ENST00000489856 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
CAV1-208ENST00000489856 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
CAV1-208ENST00000489856 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
CAV1-208ENST00000489856 NBPF3Q9H094 633 aa12.1□□□□□ -0.47
CAV1-208ENST00000489856 GREM2Q9H772 168 aa12.1□□□□□ -0.47
CAV1-208ENST00000489856 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
CAV1-208ENST00000489856 RCAN3Q9UKA8 241 aa12.1□□□□□ -0.47
CAV1-208ENST00000489856 HDAC5Q9UQL6 1122 aa12.1□□□□□ -0.47
CAV1-208ENST00000489856 CCDC88AQ3V6T2 1871 aa12.09□□□□□ -0.47
CAV1-208ENST00000489856 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
CAV1-208ENST00000489856 LMBR1LQ6UX01 489 aa12.09□□□□□ -0.47
CAV1-208ENST00000489856 RBM46Q8TBY0 533 aaKnown RBP12.09□□□□□ -0.47
CAV1-208ENST00000489856 SUCLG2Q96I99 432 aa12.09□□□□□ -0.47
CAV1-208ENST00000489856 RTFDC1Q9BY42 306 aaPredicted RBP12.09□□□□□ -0.47
CAV1-208ENST00000489856 VPS33BQ9H267 617 aa12.09□□□□□ -0.47
CAV1-208ENST00000489856 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
CAV1-208ENST00000489856 DICER1Q9UPY3 1922 aaKnown RBP12.08□□□□□ -0.48
CAV1-208ENST00000489856 ANKRD18BA2A2Z9 1011 aa12.08□□□□□ -0.48
CAV1-208ENST00000489856 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
CAV1-208ENST00000489856 SMAPO00193 183 aa12.08□□□□□ -0.48
CAV1-208ENST00000489856 ITGA6P23229 1130 aa12.08□□□□□ -0.48
CAV1-208ENST00000489856 PRELPP51888 382 aa12.08□□□□□ -0.48
CAV1-208ENST00000489856 IFIT5Q13325 482 aaKnown RBP12.08□□□□□ -0.48
CAV1-208ENST00000489856 EPHA10Q5JZY3 1008 aa12.08□□□□□ -0.48
CAV1-208ENST00000489856 DPP8Q6V1X1 898 aaPredicted RBP12.08□□□□□ -0.48
CAV1-208ENST00000489856 MPNDQ8N594 471 aa12.08□□□□□ -0.48
CAV1-208ENST00000489856 SUPT20HQ8NEM7 779 aa12.08□□□□□ -0.48
CAV1-208ENST00000489856 KAZALD1Q96I82 304 aa12.08□□□□□ -0.48
CAV1-208ENST00000489856 BSDC1Q9NW68 430 aaPredicted RBP12.08□□□□□ -0.48
CAV1-208ENST00000489856 LRRC37AA6NMS7 1700 aa12.07□□□□□ -0.48
CAV1-208ENST00000489856 HRO43593 1189 aa12.07□□□□□ -0.48
CAV1-208ENST00000489856 GNAI3P08754 354 aa12.07□□□□□ -0.48
CAV1-208ENST00000489856 UBTFL1P0CB47 393 aaPredicted RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 MS4A1P11836 297 aa12.07□□□□□ -0.48
CAV1-208ENST00000489856 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 RABL6Q3YEC7 729 aaPredicted RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 METTL3Q86U44 580 aaKnown RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 FTSJ3Q8IY81 847 aaKnown RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 CLUAP1Q96AJ1 413 aa12.07□□□□□ -0.48
CAV1-208ENST00000489856 BICC1Q9H694 974 aaKnown RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 ZNF277Q9NRM2 450 aaPredicted RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 SEPT9Q9UHD8 586 aaPredicted RBP12.07□□□□□ -0.48
CAV1-208ENST00000489856 TNNQ9UQP3 1299 aa12.07□□□□□ -0.48
CAV1-208ENST00000489856 CHMP3Q9Y3E7 222 aa12.07□□□□□ -0.48
CAV1-208ENST00000489856 COL4A1P02462 1669 aa12.06□□□□□ -0.48
CAV1-208ENST00000489856 IARSP41252 1262 aaKnown RBP12.06□□□□□ -0.48
CAV1-208ENST00000489856 CCDC57Q2TAC2 916 aa12.06□□□□□ -0.48
CAV1-208ENST00000489856 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
CAV1-208ENST00000489856 PXYLP1Q8TE99 480 aa12.06□□□□□ -0.48
CAV1-208ENST00000489856 MPHOSPH8Q99549 860 aa12.06□□□□□ -0.48
CAV1-208ENST00000489856 PODXL2Q9NZ53 605 aa12.06□□□□□ -0.48
CAV1-208ENST00000489856 NSFL1CQ9UNZ2 370 aaKnown RBP12.06□□□□□ -0.48
CAV1-208ENST00000489856 GPSM2P81274 684 aa12.05□□□□□ -0.48
CAV1-208ENST00000489856 TMEM57Q8N5G2 664 aa12.05□□□□□ -0.48
CAV1-208ENST00000489856 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
CAV1-208ENST00000489856 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
CAV1-208ENST00000489856 MEIS3Q99687 375 aa12.05□□□□□ -0.48
CAV1-208ENST00000489856 MINPP1Q9UNW1 487 aa12.05□□□□□ -0.48
CAV1-208ENST00000489856 TAF7LQ5H9L4 462 aa12.04□□□□□ -0.48
CAV1-208ENST00000489856 LAPTM4BQ86VI4 370 aa12.04□□□□□ -0.48
CAV1-208ENST00000489856 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.04□□□□□ -0.48
CAV1-208ENST00000489856 JDP2Q8WYK2 163 aa12.04□□□□□ -0.48
CAV1-208ENST00000489856 EYA3Q99504 573 aa12.04□□□□□ -0.48
CAV1-208ENST00000489856 ANKRD2Q9GZV1 360 aa12.04□□□□□ -0.48
CAV1-208ENST00000489856 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
CAV1-208ENST00000489856 XDHP47989 1333 aa12.04□□□□□ -0.48
CAV1-208ENST00000489856 C6orf229H3BNL8 230 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 TRIM66O15016 1216 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 PPIP5K2O43314 1243 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 RLBP1P12271 317 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 KIAA2012Q0VF49 1180 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 LDHAL6AQ6ZMR3 332 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 LARGE2Q8N3Y3 721 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 TBC1D16Q8TBP0 767 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 GGA1Q9UJY5 639 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
CAV1-208ENST00000489856 LTBP1Q14766 1721 aa12.03□□□□□ -0.48
CAV1-208ENST00000489856 SPEF2Q9C093 1822 aa12.02□□□□□ -0.48
CAV1-208ENST00000489856 GLTPD2A6NH11 291 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 FZD9O00144 591 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 GNAI2P04899 355 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 AOC3Q16853 763 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 WASHC4Q2M389 1173 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 ITPRIPQ8IWB1 547 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 ZNF594Q96JF6 807 aaPredicted RBP12.02□□□□□ -0.49
CAV1-208ENST00000489856 PHOX2BQ99453 314 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 ZC3H12CQ9C0D7 883 aaKnown RBP12.02□□□□□ -0.49
CAV1-208ENST00000489856 LEMD3Q9Y2U8 911 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
CAV1-208ENST00000489856 TIAM2Q8IVF5 1701 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms