RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 GRIK5Q16478 980 aa5.77□□□□□ -1.49
AC055855.1-201ENST00000489563 TPTE2Q6XPS3 522 aa5.77□□□□□ -1.49
AC055855.1-201ENST00000489563 CLEC4MQ9H2X3 399 aaPredicted RBP5.77□□□□□ -1.49
AC055855.1-201ENST00000489563 ZNF576Q9H609 170 aa5.77□□□□□ -1.49
AC055855.1-201ENST00000489563 GPN3Q9UHW5 284 aaPredicted RBP5.77□□□□□ -1.49
AC055855.1-201ENST00000489563 PPM1HQ9ULR3 514 aa5.77□□□□□ -1.49
AC055855.1-201ENST00000489563 SOX13Q9UN79 622 aa5.77□□□□□ -1.49
AC055855.1-201ENST00000489563 USP31Q70CQ4 1352 aa5.77□□□□□ -1.49
AC055855.1-201ENST00000489563 WIPF1O43516 503 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 FBXO24O75426 580 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 EPHA1P21709 976 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 ZNF76P36508 570 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 ST13P50502 369 aaKnown RBP5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 ZNF157P51786 506 aaPredicted RBP5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 PCDH1Q08174 1060 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 IKBKEQ14164 716 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 RPS26P11Q5JNZ5 115 aaPredicted RBP5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 LDLRAD1Q5T700 205 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 MSL1Q68DK7 614 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 FAM117BQ6P1L5 589 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 VN1R5Q7Z5H4 357 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 RNF34Q969K3 372 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 CEP44Q9C0F1 390 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 PRDM6Q9NQX0 595 aa5.76□□□□□ -1.49
AC055855.1-201ENST00000489563 H3BRJ5 948 aa5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 LINC01387J3KSC0 135 aa5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 CCDC85BQ15834 202 aaPredicted RBP5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 TRAPPC3LQ5T215 181 aa5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 C9orf131Q5VYM1 1079 aa5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 TXNDC11Q6PKC3 985 aa5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 DMRTC2Q8IXT2 367 aaPredicted RBP5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 SLC7A3Q8WY07 619 aa5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 SEC31BQ9NQW1 1179 aa5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 METTL5Q9NRN9 209 aaKnown RBP5.75□□□□□ -1.49
AC055855.1-201ENST00000489563 SOX1O00570 391 aaPredicted RBP5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 ARHGEF15O94989 841 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 ESRRAP11474 423 aaPredicted RBP5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 BAG6P46379 1132 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 DGKGP49619 791 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 ARL4DP49703 201 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 FANCCQ00597 558 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 PPP2R3AQ06190 1150 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 FAAP100Q0VG06 881 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 ZNF423Q2M1K9 1284 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 SV2BQ7L1I2 683 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 ZSCAN1Q8NBB4 408 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 DDX54Q8TDD1 881 aaKnown RBP5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 TMEM39AQ9NV64 488 aa5.74□□□□□ -1.49
AC055855.1-201ENST00000489563 NID1P14543 1247 aa5.73□□□□□ -1.49
AC055855.1-201ENST00000489563 PIP4K2BP78356 416 aa5.73□□□□□ -1.49
AC055855.1-201ENST00000489563 HDLBPQ00341 1268 aaKnown RBP5.73□□□□□ -1.49
AC055855.1-201ENST00000489563 HS2ST1Q7LGA3 356 aa5.73□□□□□ -1.49
AC055855.1-201ENST00000489563 ANKRD24Q8TF21 1146 aa5.73□□□□□ -1.49
AC055855.1-201ENST00000489563 NECAB3Q96P71 396 aaPredicted RBP5.73□□□□□ -1.49
AC055855.1-201ENST00000489563 NOC4LQ9BVI4 516 aaKnown RBP5.73□□□□□ -1.49
AC055855.1-201ENST00000489563 GGT7Q9UJ14 662 aa5.73□□□□□ -1.49
AC055855.1-201ENST00000489563 PIK3R2O00459 728 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 FSCN2O14926 492 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 B3GALT4O96024 378 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 HOXB4P17483 251 aaPredicted RBP5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 SNRPNP63162 240 aaKnown RBP5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 INSM1Q01101 510 aaPredicted RBP5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 GSTM4Q03013 218 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 C19orf57Q0VDD7 668 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 COL9A3Q14050 684 aaPredicted RBP5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 MAP3K11Q16584 847 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 RELL1Q8IUW5 271 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 WNT8BQ93098 351 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 CARD10Q9BWT7 1032 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 IGSF5Q9NSI5 407 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 MKL2Q9ULH7 1088 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 SAMM50Q9Y512 469 aa5.72□□□□□ -1.49
AC055855.1-201ENST00000489563 SPDYE3A6NKU9 549 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 ENC1O14682 589 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 GNB5O14775 395 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 EIF4EBP3O60516 100 aaPredicted RBP5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 CELA3AP09093 270 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 RLBP1P12271 317 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 ERCC5P28715 1186 aaPredicted RBP5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 RAC1P63000 192 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 HGSNATQ68CP4 663 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 PODNQ7Z5L7 613 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 NT5DC4Q86YG4 428 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 MAP4K3Q8IVH8 894 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 BEND7Q8N7W2 519 aaPredicted RBP5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 TRIM56Q9BRZ2 755 aaKnown RBP5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 PLVAPQ9BX97 442 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 OSGEPQ9NPF4 335 aa5.71□□□□□ -1.5
AC055855.1-201ENST00000489563 PAGE1O75459 146 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 LMNB1P20700 586 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 GBP2P32456 591 aaPredicted RBP5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 TRIM28Q13263 835 aaKnown RBP5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 PWP1Q13610 501 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 SETDB1Q15047 1291 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 TTBK2Q6IQ55 1244 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 LINC00114Q6XXX2 140 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 METTL16Q86W50 562 aaKnown RBP5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 DTWD1Q8N5C7 304 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 KLHL23Q8NBE8 558 aa5.7□□□□□ -1.5
AC055855.1-201ENST00000489563 TRIM11Q96F44 468 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms