RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 IQSEC3Q9UPP2 1182 aaPredicted RBP16.61■□□□□ 0.25
CCL28-202ENST00000489442 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
CCL28-202ENST00000489442 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
CCL28-202ENST00000489442 BCAMP50895 628 aa16.6■□□□□ 0.25
CCL28-202ENST00000489442 FMR1Q06787 632 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCL28-202ENST00000489442 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCL28-202ENST00000489442 ATP2B3Q16720 1220 aa16.6■□□□□ 0.25
CCL28-202ENST00000489442 KRT26Q7Z3Y9 468 aa16.6■□□□□ 0.25
CCL28-202ENST00000489442 FBXO33Q7Z6M2 555 aa16.6■□□□□ 0.25
CCL28-202ENST00000489442 USP48Q86UV5 1035 aa16.6■□□□□ 0.25
CCL28-202ENST00000489442 KLRG1Q96E93 195 aa16.6■□□□□ 0.25
CCL28-202ENST00000489442 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
CCL28-202ENST00000489442 ZNF408Q9H9D4 720 aa16.6■□□□□ 0.25
CCL28-202ENST00000489442 ABT1Q9ULW3 272 aaKnown RBP16.6■□□□□ 0.25
CCL28-202ENST00000489442 MYH13Q9UKX3 1938 aa16.59■□□□□ 0.25
CCL28-202ENST00000489442 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
CCL28-202ENST00000489442 F8W031 263 aaPredicted RBP16.59■□□□□ 0.25
CCL28-202ENST00000489442 FGFR2P21802 821 aa16.59■□□□□ 0.25
CCL28-202ENST00000489442 CHAF1AQ13111 956 aaPredicted RBP16.59■□□□□ 0.25
CCL28-202ENST00000489442 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
CCL28-202ENST00000489442 GGA3Q9NZ52 723 aa16.59■□□□□ 0.25
CCL28-202ENST00000489442 FAM205AQ6ZU69 1335 aa16.58■□□□□ 0.25
CCL28-202ENST00000489442 FKBP1AP62942 108 aaKnown RBP16.58■□□□□ 0.24
CCL28-202ENST00000489442 ATP8B2P98198 1209 aa16.58■□□□□ 0.24
CCL28-202ENST00000489442 MFSD14BQ5SR56 506 aa16.58■□□□□ 0.24
CCL28-202ENST00000489442 ANGEL2Q5VTE6 544 aaKnown RBP16.58■□□□□ 0.24
CCL28-202ENST00000489442 CERS5Q8N5B7 392 aa16.58■□□□□ 0.24
CCL28-202ENST00000489442 MKRN1Q9UHC7 482 aaKnown RBP16.58■□□□□ 0.24
CCL28-202ENST00000489442 CELF2O95319 508 aaKnown RBP16.57■□□□□ 0.24
CCL28-202ENST00000489442 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCL28-202ENST00000489442 OS9Q13438 667 aaPredicted RBP16.57■□□□□ 0.24
CCL28-202ENST00000489442 DLGAP5Q15398 846 aa16.57■□□□□ 0.24
CCL28-202ENST00000489442 NBPF9Q3BBW0 867 aa16.57■□□□□ 0.24
CCL28-202ENST00000489442 GNL3LQ9NVN8 582 aaKnown RBP16.57■□□□□ 0.24
CCL28-202ENST00000489442 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
CCL28-202ENST00000489442 COG6Q9Y2V7 657 aa16.57■□□□□ 0.24
CCL28-202ENST00000489442 PCNTO95613 3336 aa16.57■□□□□ 0.24
CCL28-202ENST00000489442 ASTN2O75129 1339 aaPredicted RBP16.57■□□□□ 0.24
CCL28-202ENST00000489442 WNT10BO00744 389 aa16.56■□□□□ 0.24
CCL28-202ENST00000489442 TFCP2Q12800 502 aa16.56■□□□□ 0.24
CCL28-202ENST00000489442 MVPQ14764 893 aaKnown RBP16.56■□□□□ 0.24
CCL28-202ENST00000489442 TBC1D22AQ8WUA7 517 aa16.56■□□□□ 0.24
CCL28-202ENST00000489442 CHMP4BQ9H444 224 aaKnown RBP16.56■□□□□ 0.24
CCL28-202ENST00000489442 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
CCL28-202ENST00000489442 ADM5C9JUS6 153 aa16.55■□□□□ 0.24
CCL28-202ENST00000489442 TIMM10P62072 90 aa16.55■□□□□ 0.24
CCL28-202ENST00000489442 DEFB115Q30KQ5 88 aa16.55■□□□□ 0.24
CCL28-202ENST00000489442 CST9Q5W186 159 aa16.55■□□□□ 0.24
CCL28-202ENST00000489442 NEUROD6Q96NK8 337 aa16.55■□□□□ 0.24
CCL28-202ENST00000489442 TTF2Q9UNY4 1162 aaKnown RBP16.55■□□□□ 0.24
CCL28-202ENST00000489442 MYO1BO43795 1136 aa16.54■□□□□ 0.24
CCL28-202ENST00000489442 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
CCL28-202ENST00000489442 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
CCL28-202ENST00000489442 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
CCL28-202ENST00000489442 SSH3Q8TE77 659 aa16.54■□□□□ 0.24
CCL28-202ENST00000489442 PITPNM2Q9BZ72 1349 aa16.54■□□□□ 0.24
CCL28-202ENST00000489442 POLA2Q14181 598 aa16.53■□□□□ 0.24
CCL28-202ENST00000489442 PDE3AQ14432 1141 aa16.53■□□□□ 0.24
CCL28-202ENST00000489442 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
CCL28-202ENST00000489442 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
CCL28-202ENST00000489442 CNTNAP1P78357 1384 aa16.53■□□□□ 0.24
CCL28-202ENST00000489442 A0A1B0GUL7 405 aa16.52■□□□□ 0.24
CCL28-202ENST00000489442 WDR66Q8TBY9 1149 aa16.52■□□□□ 0.24
CCL28-202ENST00000489442 ARAP2Q8WZ64 1704 aa16.52■□□□□ 0.24
CCL28-202ENST00000489442 SCAF8Q9UPN6 1271 aaKnown RBP16.52■□□□□ 0.24
CCL28-202ENST00000489442 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.23
CCL28-202ENST00000489442 ADORA1P30542 326 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 PHKA1P46020 1223 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 GRM1Q13255 1194 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 CCDC102BQ68D86 513 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 CEP85Q6P2H3 762 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 APOBEC3FQ8IUX4 373 aaKnown RBP16.51■□□□□ 0.23
CCL28-202ENST00000489442 C2orf69Q8N8R5 385 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 MTMR14Q8NCE2 650 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 CDCA5Q96FF9 252 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 XAGE2Q96GT9 111 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 SERPINA10Q9UK55 444 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 DENND2AQ9ULE3 1009 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 TLL2Q9Y6L7 1015 aa16.51■□□□□ 0.23
CCL28-202ENST00000489442 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
CCL28-202ENST00000489442 RASSF10A6NK89 507 aa16.5■□□□□ 0.23
CCL28-202ENST00000489442 SEMA3EO15041 775 aa16.5■□□□□ 0.23
CCL28-202ENST00000489442 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
CCL28-202ENST00000489442 SAPCD2Q86UD0 394 aa16.5■□□□□ 0.23
CCL28-202ENST00000489442 JMYQ8N9B5 988 aa16.5■□□□□ 0.23
CCL28-202ENST00000489442 PRMT6Q96LA8 375 aaPredicted RBP16.5■□□□□ 0.23
CCL28-202ENST00000489442 GBA2Q9HCG7 927 aaPredicted RBP16.5■□□□□ 0.23
CCL28-202ENST00000489442 MAST3O60307 1309 aa16.5■□□□□ 0.23
CCL28-202ENST00000489442 HMMRO75330 724 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 NF2P35240 595 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 ECE1P42892 770 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 VEGFBP49765 207 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 ZBED3Q96IU2 234 aaPredicted RBP16.49■□□□□ 0.23
CCL28-202ENST00000489442 VEZTQ9HBM0 779 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 SUGT1Q9Y2Z0 365 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 PCDHAC2Q9Y5I4 1007 aa16.49■□□□□ 0.23
CCL28-202ENST00000489442 CLRN2A0PK11 232 aa16.48■□□□□ 0.23
CCL28-202ENST00000489442 CRKP46108 304 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms