RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
NEB-215ENST00000489048 ZNF142P52746 1687 aaPredicted RBP12.78□□□□□ -0.36
NEB-215ENST00000489048 H7C1W4 665 aa12.77□□□□□ -0.36
NEB-215ENST00000489048 GOLIM4O00461 696 aa12.77□□□□□ -0.36
NEB-215ENST00000489048 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.36
NEB-215ENST00000489048 NDUFA8P51970 172 aa12.77□□□□□ -0.36
NEB-215ENST00000489048 CCDC93Q567U6 631 aa12.77□□□□□ -0.36
NEB-215ENST00000489048 E4F1Q66K89 784 aaPredicted RBP12.77□□□□□ -0.36
NEB-215ENST00000489048 BRAPQ7Z569 592 aa12.77□□□□□ -0.36
NEB-215ENST00000489048 TJP1Q07157 1748 aa12.77□□□□□ -0.36
NEB-215ENST00000489048 FOSBP53539 338 aa12.77□□□□□ -0.37
NEB-215ENST00000489048 NLRP12P59046 1061 aa12.77□□□□□ -0.37
NEB-215ENST00000489048 FBXO38Q6PIJ6 1188 aa12.77□□□□□ -0.37
NEB-215ENST00000489048 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 A0A087WWV3 80 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 IL15P40933 162 aaPredicted RBP12.76□□□□□ -0.37
NEB-215ENST00000489048 ARMCX5Q6P1M9 558 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 PPP1R13BQ96KQ4 1090 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 FMNL2Q96PY5 1086 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
NEB-215ENST00000489048 NUP188Q5SRE5 1749 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 NWD2Q9ULI1 1742 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 NCAPHQ15003 741 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 ELF2Q15723 593 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 DPCR1Q3MIW9 517 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 LMBR1LQ6UX01 489 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 CREBRFQ8IUR6 639 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 SDF4Q9BRK5 362 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 PARP4Q9UKK3 1724 aaKnown RBP12.76□□□□□ -0.37
NEB-215ENST00000489048 ALS2Q96Q42 1657 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 MEGF6O75095 1541 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
NEB-215ENST00000489048 A0A0G2JLW4 131 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 A0A1B0GVL5 298 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 IKBKBO14920 756 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 CIAO1O76071 339 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 H2AFXP16104 143 aaPredicted RBP12.75□□□□□ -0.37
NEB-215ENST00000489048 TPM4P67936 248 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 XPO4Q9C0E2 1151 aaKnown RBP12.75□□□□□ -0.37
NEB-215ENST00000489048 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
NEB-215ENST00000489048 GUCY1B3Q02153 619 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 STK38Q15208 465 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 TERF2Q15554 542 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 MYSM1Q5VVJ2 828 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 ANKLE2Q86XL3 938 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 FBXO18Q8NFZ0 1043 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 TIGD1Q96MW7 591 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 CLIC4Q9Y696 253 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 M0R2C6 588 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 SPTLC2O15270 562 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 CCP110O43303 1012 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 DHX16O60231 1041 aaKnown RBP12.75□□□□□ -0.37
NEB-215ENST00000489048 TTC5Q8N0Z6 440 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 DCAF5Q96JK2 942 aa12.75□□□□□ -0.37
NEB-215ENST00000489048 SFPQP23246 707 aaKnown RBP eCLIP12.74□□□□□ -0.37
NEB-215ENST00000489048 CMA1P23946 247 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 AXDND1Q5T1B0 1012 aaPredicted RBP12.74□□□□□ -0.37
NEB-215ENST00000489048 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 ORAI2Q96SN7 254 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 IFNKQ9P0W0 207 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 COL18A1P39060 1754 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 ATP5J2-PTCD1G3V325 749 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 NRDCO43847 1150 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
NEB-215ENST00000489048 SLC3A2P08195 630 aaKnown RBP12.74□□□□□ -0.37
NEB-215ENST00000489048 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
NEB-215ENST00000489048 LRRFIP1Q32MZ4 808 aaKnown RBP12.74□□□□□ -0.37
NEB-215ENST00000489048 ZNF771Q7L3S4 317 aaPredicted RBP12.74□□□□□ -0.37
NEB-215ENST00000489048 TMC6Q7Z403 805 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 MB21D2Q8IYB1 491 aaPredicted RBP12.74□□□□□ -0.37
NEB-215ENST00000489048 ERCC4Q92889 916 aaPredicted RBP12.74□□□□□ -0.37
NEB-215ENST00000489048 HPS5Q9UPZ3 1129 aa12.74□□□□□ -0.37
NEB-215ENST00000489048 PHLPP2Q6ZVD8 1323 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 EYA2O00167 538 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 FOXP2O15409 715 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 MYO1BO43795 1136 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 ZNF202O95125 648 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 ZRSR1Q15695 479 aaKnown RBP12.73□□□□□ -0.37
NEB-215ENST00000489048 TUBE1Q9UJT0 475 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 SMC2O95347 1197 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 SF3A1Q15459 793 aaKnown RBP12.73□□□□□ -0.37
NEB-215ENST00000489048 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 NEUROD6Q96NK8 337 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 ZNF446Q9NWS9 450 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 ABCC12Q96J65 1359 aa12.73□□□□□ -0.37
NEB-215ENST00000489048 ZFYP08048 801 aaPredicted RBP12.72□□□□□ -0.37
NEB-215ENST00000489048 KIF23Q02241 960 aaPredicted RBP12.72□□□□□ -0.37
NEB-215ENST00000489048 ANO1Q5XXA6 986 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 HSD3B7Q9H2F3 369 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 TMX1Q9H3N1 280 aa12.72□□□□□ -0.37
NEB-215ENST00000489048 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.72□□□□□ -0.37
NEB-215ENST00000489048 V9GYY5 206 aaPredicted RBP12.72□□□□□ -0.37
NEB-215ENST00000489048 PFKFB1P16118 471 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms