RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 LINS1Q8NG48 757 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 DNAAF4Q8WXU2 420 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 WNK4Q96J92 1243 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.21
YIPF3-207ENST00000488966 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
YIPF3-207ENST00000488966 COL1A1P02452 1464 aaPredicted RBP13.76□□□□□ -0.21
YIPF3-207ENST00000488966 IGF2BP3O00425 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
YIPF3-207ENST00000488966 FKBP5Q13451 457 aaPredicted RBP13.76□□□□□ -0.21
YIPF3-207ENST00000488966 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
YIPF3-207ENST00000488966 C15orf52Q6ZUT6 534 aaKnown RBP13.76□□□□□ -0.21
YIPF3-207ENST00000488966 PRMT6Q96LA8 375 aaPredicted RBP13.76□□□□□ -0.21
YIPF3-207ENST00000488966 JAG2Q9Y219 1238 aa13.76□□□□□ -0.21
YIPF3-207ENST00000488966 TRIM17Q9Y577 477 aa13.76□□□□□ -0.21
YIPF3-207ENST00000488966 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 PPP1R12BO60237 982 aaPredicted RBP13.75□□□□□ -0.21
YIPF3-207ENST00000488966 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 ZBTB48P10074 688 aaPredicted RBP13.75□□□□□ -0.21
YIPF3-207ENST00000488966 IL1R1P14778 569 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 INHBEP58166 350 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 FOXO4P98177 505 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 CFAP100Q494V2 611 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 NBPF12Q5TAG4 269 aaPredicted RBP13.75□□□□□ -0.21
YIPF3-207ENST00000488966 OTOP1Q7RTM1 612 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 VEZTQ9HBM0 779 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 PPP2R3BQ9Y5P8 575 aa13.75□□□□□ -0.21
YIPF3-207ENST00000488966 GJA5P36382 358 aa13.74□□□□□ -0.21
YIPF3-207ENST00000488966 IFIT5Q13325 482 aaKnown RBP13.74□□□□□ -0.21
YIPF3-207ENST00000488966 ZNF804AQ7Z570 1209 aa13.74□□□□□ -0.21
YIPF3-207ENST00000488966 CHMP3Q9Y3E7 222 aa13.74□□□□□ -0.21
YIPF3-207ENST00000488966 IL16Q14005 1332 aa13.73□□□□□ -0.21
YIPF3-207ENST00000488966 MYH3P11055 1940 aa13.73□□□□□ -0.21
YIPF3-207ENST00000488966 POTEFA5A3E0 1075 aa13.73□□□□□ -0.21
YIPF3-207ENST00000488966 F6X3S4 739 aa13.73□□□□□ -0.21
YIPF3-207ENST00000488966 MYO1BO43795 1136 aa13.73□□□□□ -0.21
YIPF3-207ENST00000488966 USP2O75604 605 aaPredicted RBP13.73□□□□□ -0.21
YIPF3-207ENST00000488966 FKBP1AP62942 108 aaKnown RBP13.73□□□□□ -0.21
YIPF3-207ENST00000488966 RASA3Q14644 834 aa13.73□□□□□ -0.21
YIPF3-207ENST00000488966 SUPT20HL1Q3ZLR7 823 aa13.73□□□□□ -0.21
YIPF3-207ENST00000488966 EPHA10Q5JZY3 1008 aa13.73□□□□□ -0.21
YIPF3-207ENST00000488966 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
YIPF3-207ENST00000488966 UNCXA6NJT0 531 aa13.72□□□□□ -0.21
YIPF3-207ENST00000488966 PLIN1O60240 522 aa13.72□□□□□ -0.21
YIPF3-207ENST00000488966 VAMP4O75379 141 aa13.72□□□□□ -0.21
YIPF3-207ENST00000488966 CRHR2Q13324 411 aa13.72□□□□□ -0.21
YIPF3-207ENST00000488966 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
YIPF3-207ENST00000488966 ZNF594Q96JF6 807 aaPredicted RBP13.72□□□□□ -0.21
YIPF3-207ENST00000488966 PTPN18Q99952 460 aa13.72□□□□□ -0.21
YIPF3-207ENST00000488966 IREB2P48200 963 aaKnown RBP13.71□□□□□ -0.21
YIPF3-207ENST00000488966 RBM5P52756 815 aaKnown RBP eCLIP13.71□□□□□ -0.213e-7■■■■□ 25.8
YIPF3-207ENST00000488966 CAP1Q01518 475 aa13.71□□□□□ -0.21
YIPF3-207ENST00000488966 BEND3Q5T5X7 828 aa13.71□□□□□ -0.21
YIPF3-207ENST00000488966 CD99L2Q8TCZ2 262 aa13.71□□□□□ -0.21
YIPF3-207ENST00000488966 PTPN22Q9Y2R2 807 aa13.71□□□□□ -0.21
YIPF3-207ENST00000488966 TESPA1A2RU30 521 aaPredicted RBP13.7□□□□□ -0.22
YIPF3-207ENST00000488966 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
YIPF3-207ENST00000488966 INTS3Q68E01 1043 aaKnown RBP13.7□□□□□ -0.22
YIPF3-207ENST00000488966 LDHAL6AQ6ZMR3 332 aa13.7□□□□□ -0.22
YIPF3-207ENST00000488966 CDAN1Q8IWY9 1227 aa13.7□□□□□ -0.22
YIPF3-207ENST00000488966 ANKRD13AQ8IZ07 590 aa13.7□□□□□ -0.22
YIPF3-207ENST00000488966 ERO1AQ96HE7 468 aa13.7□□□□□ -0.22
YIPF3-207ENST00000488966 FAM205AQ6ZU69 1335 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 EXOSC9Q06265 439 aaKnown RBP13.69□□□□□ -0.22
YIPF3-207ENST00000488966 CCDC57Q2TAC2 916 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 TAF7LQ5H9L4 462 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 MFSD14BQ5SR56 506 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 OTUD7BQ6GQQ9 843 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
YIPF3-207ENST00000488966 OPTNQ96CV9 577 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 ELP3Q9H9T3 547 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 EFCC1Q9HA90 598 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 CNNM1Q9NRU3 951 aa13.69□□□□□ -0.22
YIPF3-207ENST00000488966 ZNF70Q9UC06 446 aaPredicted RBP13.69□□□□□ -0.22
YIPF3-207ENST00000488966 GRM8O00222 908 aa13.68□□□□□ -0.22
YIPF3-207ENST00000488966 GYG1P46976 350 aa13.68□□□□□ -0.22
YIPF3-207ENST00000488966 SP3Q02447 781 aa13.68□□□□□ -0.22
YIPF3-207ENST00000488966 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
YIPF3-207ENST00000488966 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
YIPF3-207ENST00000488966 ARMC5Q96C12 935 aa13.68□□□□□ -0.22
YIPF3-207ENST00000488966 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
YIPF3-207ENST00000488966 TEPSINQ96N21 525 aa13.68□□□□□ -0.22
YIPF3-207ENST00000488966 TDRD3Q9H7E2 651 aaKnown RBP13.68□□□□□ -0.22
YIPF3-207ENST00000488966 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
YIPF3-207ENST00000488966 SALL2Q9Y467 1007 aaPredicted RBP13.68□□□□□ -0.22
YIPF3-207ENST00000488966 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
YIPF3-207ENST00000488966 HIBADHP31937 336 aaKnown RBP13.67□□□□□ -0.22
YIPF3-207ENST00000488966 TNFAIP1Q13829 316 aa13.67□□□□□ -0.22
YIPF3-207ENST00000488966 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
YIPF3-207ENST00000488966 DZIP1LQ8IYY4 767 aaKnown RBP13.67□□□□□ -0.22
YIPF3-207ENST00000488966 GCC1Q96CN9 775 aa13.67□□□□□ -0.22
YIPF3-207ENST00000488966 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
YIPF3-207ENST00000488966 SERPINA10Q9UK55 444 aa13.67□□□□□ -0.22
YIPF3-207ENST00000488966 TCP10L2B9ZVM9 353 aa13.66□□□□□ -0.22
YIPF3-207ENST00000488966 VGLL4Q14135 290 aa13.66□□□□□ -0.22
YIPF3-207ENST00000488966 UBE4AQ14139 1066 aa13.66□□□□□ -0.22
YIPF3-207ENST00000488966 GRIK5Q16478 980 aa13.66□□□□□ -0.22
YIPF3-207ENST00000488966 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
YIPF3-207ENST00000488966 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
YIPF3-207ENST00000488966 PUS3Q9BZE2 481 aaKnown RBP13.66□□□□□ -0.22
YIPF3-207ENST00000488966 HTTP42858 3142 aa13.65□□□□□ -0.22
YIPF3-207ENST00000488966 CRKP46108 304 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms