RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 DPP8Q6V1X1 898 aaPredicted RBP14.81□□□□□ -0.04
HLA-DOB-209ENST00000488325 CDCA5Q96FF9 252 aa14.81□□□□□ -0.04
HLA-DOB-209ENST00000488325 RBBP6Q7Z6E9 1792 aaKnown RBP14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 BRCA2P51587 3418 aa14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 APBB1O00213 710 aa14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 EN2P19622 333 aaPredicted RBP14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 EPHA10Q5JZY3 1008 aa14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 RBM26Q5T8P6 1007 aaKnown RBP14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 C3orf67Q6ZVT6 689 aa14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 SULF1Q8IWU6 871 aa14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 JARID2Q92833 1246 aaPredicted RBP14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 OTUD5Q96G74 571 aa14.8□□□□□ -0.04
HLA-DOB-209ENST00000488325 LMBR1LQ6UX01 489 aa14.79□□□□□ -0.04
HLA-DOB-209ENST00000488325 RHPN1Q8TCX5 695 aa14.79□□□□□ -0.04
HLA-DOB-209ENST00000488325 UTP14AQ9BVJ6 771 aaKnown RBP14.79□□□□□ -0.04
HLA-DOB-209ENST00000488325 COPRSQ9NQ92 184 aa14.79□□□□□ -0.04
HLA-DOB-209ENST00000488325 GGA3Q9NZ52 723 aa14.79□□□□□ -0.04
HLA-DOB-209ENST00000488325 TRMT112Q9UI30 125 aaKnown RBP14.79□□□□□ -0.04
HLA-DOB-209ENST00000488325 SH3TC1Q8TE82 1336 aa14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 PSMD14O00487 310 aa14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 SMARCA5O60264 1052 aaPredicted RBP14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 TM4SF4P48230 202 aa14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 FOXO4P98177 505 aa14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 MPNDQ8N594 471 aa14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 R3HDMLQ9H3Y0 253 aa14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 CHMP3Q9Y3E7 222 aa14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 TRIM17Q9Y577 477 aa14.78□□□□□ -0.04
HLA-DOB-209ENST00000488325 RANBP2P49792 3224 aaKnown RBP14.77□□□□□ -0.04
HLA-DOB-209ENST00000488325 ASTN2O75129 1339 aaPredicted RBP14.77□□□□□ -0.04
HLA-DOB-209ENST00000488325 UBN2Q6ZU65 1347 aa14.77□□□□□ -0.04
HLA-DOB-209ENST00000488325 H0YGN5 161 aa14.77□□□□□ -0.05
HLA-DOB-209ENST00000488325 FKBP1BP68106 108 aa14.77□□□□□ -0.05
HLA-DOB-209ENST00000488325 RTL5Q5HYW3 569 aaPredicted RBP14.77□□□□□ -0.05
HLA-DOB-209ENST00000488325 PLEKHM2Q8IWE5 1019 aa14.77□□□□□ -0.05
HLA-DOB-209ENST00000488325 FAM89AQ96GI7 184 aa14.77□□□□□ -0.05
HLA-DOB-209ENST00000488325 BACH2Q9BYV9 841 aa14.77□□□□□ -0.05
HLA-DOB-209ENST00000488325 IRS4O14654 1257 aaPredicted RBP14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 PDE8AO60658 829 aa14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 RFX5P48382 616 aaPredicted RBP14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 KIF4BQ2VIQ3 1234 aa14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 BMP2KLQ5H9B9 411 aa14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 SUSD4Q5VX71 490 aa14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 MOB2Q70IA6 237 aa14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 OTOP1Q7RTM1 612 aa14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 CLASRPQ8N2M8 674 aaKnown RBP14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 CFHR5Q9BXR6 569 aa14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 FBXO3Q9UK99 471 aa14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 PA2G4Q9UQ80 394 aaKnown RBP14.76□□□□□ -0.05
HLA-DOB-209ENST00000488325 AOX1Q06278 1338 aa14.75□□□□□ -0.05
HLA-DOB-209ENST00000488325 RPS12P25398 132 aaKnown RBP14.75□□□□□ -0.05
HLA-DOB-209ENST00000488325 PTPN12Q05209 780 aaKnown RBP14.75□□□□□ -0.05
HLA-DOB-209ENST00000488325 CCDC57Q2TAC2 916 aa14.75□□□□□ -0.05
HLA-DOB-209ENST00000488325 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
HLA-DOB-209ENST00000488325 SP8Q8IXZ3 490 aa14.75□□□□□ -0.05
HLA-DOB-209ENST00000488325 OSBPL3Q9H4L5 887 aa14.75□□□□□ -0.05
HLA-DOB-209ENST00000488325 NTSR2O95665 410 aa14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 CSF1RP07333 972 aa14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 CTSWP56202 376 aa14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 MKRN3Q13064 507 aaKnown RBP14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 TTC22Q5TAA0 569 aa14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 GPATCH3Q96I76 525 aa14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 NLRP3Q96P20 1036 aa14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 BCL11AQ9H165 835 aa14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
HLA-DOB-209ENST00000488325 UBE2Q2LH0YL09 131 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 EIF5BO60841 1220 aaKnown RBP14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 BBOX1O75936 387 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 MX1P20591 662 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 PDE1AP54750 535 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 IFIT5Q13325 482 aaKnown RBP14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 C8orf34Q49A92 452 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 TAF7LQ5H9L4 462 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 ARMC5Q96C12 935 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 SIL1Q9H173 461 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 DUOX1Q9NRD9 1551 aa14.73□□□□□ -0.05
HLA-DOB-209ENST00000488325 ANKRD18BA2A2Z9 1011 aa14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 CIAO1O76071 339 aa14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 IFIT2P09913 472 aaKnown RBP14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 IL15P40933 162 aaPredicted RBP14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 SREBF2Q12772 1141 aa14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 ANGEL2Q5VTE6 544 aaKnown RBP14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 DBNDD1Q9H9R9 158 aa14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 STAP2Q9UGK3 403 aa14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 PTPN22Q9Y2R2 807 aa14.72□□□□□ -0.05
HLA-DOB-209ENST00000488325 SALL3Q9BXA9 1300 aa14.71□□□□□ -0.05
HLA-DOB-209ENST00000488325 EYA2O00167 538 aa14.71□□□□□ -0.05
HLA-DOB-209ENST00000488325 TTLL11Q8NHH1 800 aa14.71□□□□□ -0.05
HLA-DOB-209ENST00000488325 KLHDC4Q8TBB5 520 aa14.71□□□□□ -0.05
HLA-DOB-209ENST00000488325 OTUD7AQ8TE49 926 aaPredicted RBP14.71□□□□□ -0.05
HLA-DOB-209ENST00000488325 TMEM106CQ9BVX2 250 aa14.71□□□□□ -0.05
HLA-DOB-209ENST00000488325 TTC41PQ6P2S7 1318 aa14.7□□□□□ -0.06
HLA-DOB-209ENST00000488325 ERC2O15083 957 aa14.7□□□□□ -0.06
HLA-DOB-209ENST00000488325 SASH1O94885 1247 aa14.7□□□□□ -0.06
HLA-DOB-209ENST00000488325 CCDC152Q4G0S7 254 aa14.7□□□□□ -0.06
HLA-DOB-209ENST00000488325 KCNQ5Q9NR82 932 aa14.7□□□□□ -0.06
HLA-DOB-209ENST00000488325 RBM19Q9Y4C8 960 aaKnown RBP14.7□□□□□ -0.06
HLA-DOB-209ENST00000488325 MYH3P11055 1940 aa14.7□□□□□ -0.06
HLA-DOB-209ENST00000488325 RTL9Q8NET4 1388 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms