RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 KIAA0825Q8IV33 1275 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 SULF1Q8IWU6 871 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 TRPM4Q8TD43 1214 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
LCN2-205ENST00000487719 C1orf115Q9H7X2 142 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 MAST3O60307 1309 aa11.56□□□□□ -0.56
LCN2-205ENST00000487719 TMEM88BA6NKF7 163 aa11.55□□□□□ -0.56
LCN2-205ENST00000487719 SURF6O75683 361 aaKnown RBP11.55□□□□□ -0.56
LCN2-205ENST00000487719 RBM5P52756 815 aaKnown RBP eCLIP11.55□□□□□ -0.56
LCN2-205ENST00000487719 CHAF1AQ13111 956 aaPredicted RBP11.55□□□□□ -0.56
LCN2-205ENST00000487719 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
LCN2-205ENST00000487719 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
LCN2-205ENST00000487719 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
LCN2-205ENST00000487719 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
LCN2-205ENST00000487719 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
LCN2-205ENST00000487719 PNMA6EA0A0J9YXQ4 647 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 SEMA3EO15041 775 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 FGFR2P21802 821 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 DLGAP5Q15398 846 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 KRT26Q7Z3Y9 468 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 FBXO33Q7Z6M2 555 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
LCN2-205ENST00000487719 ZGPATQ8N5A5 531 aaKnown RBP11.54□□□□□ -0.56
LCN2-205ENST00000487719 WDR66Q8TBY9 1149 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 SSH3Q8TE77 659 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 NEUROD6Q96NK8 337 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 GMLQ99445 158 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 GGA3Q9NZ52 723 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 PITPNM2Q9BZ72 1349 aa11.54□□□□□ -0.56
LCN2-205ENST00000487719 CEP350Q5VT06 3117 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 A0A1B0GUL7 405 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 SHTN1A0MZ66 631 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 F8W031 263 aaPredicted RBP11.53□□□□□ -0.56
LCN2-205ENST00000487719 ITGBL1O95965 494 aaPredicted RBP11.53□□□□□ -0.56
LCN2-205ENST00000487719 BCAMP50895 628 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 TFCP2Q12800 502 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 SCARF1Q14162 830 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 POLA2Q14181 598 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 CEP85Q6P2H3 762 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 APOBEC3FQ8IUX4 373 aaKnown RBP11.53□□□□□ -0.56
LCN2-205ENST00000487719 PGAP2Q9UHJ9 254 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 DENND2AQ9ULE3 1009 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 ABT1Q9ULW3 272 aaKnown RBP11.53□□□□□ -0.56
LCN2-205ENST00000487719 TTF2Q9UNY4 1162 aaKnown RBP11.53□□□□□ -0.56
LCN2-205ENST00000487719 IQSEC3Q9UPP2 1182 aaPredicted RBP11.53□□□□□ -0.56
LCN2-205ENST00000487719 JAG2Q9Y219 1238 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 SUGT1Q9Y2Z0 365 aa11.53□□□□□ -0.56
LCN2-205ENST00000487719 NF2P35240 595 aa11.52□□□□□ -0.57
LCN2-205ENST00000487719 MXD3Q9BW11 206 aa11.52□□□□□ -0.57
LCN2-205ENST00000487719 GLIS2Q9BZE0 524 aaPredicted RBP11.52□□□□□ -0.57
LCN2-205ENST00000487719 ZNF408Q9H9D4 720 aa11.52□□□□□ -0.57
LCN2-205ENST00000487719 CELF2O95319 508 aaKnown RBP11.51□□□□□ -0.57
LCN2-205ENST00000487719 HIRAP54198 1017 aaPredicted RBP11.51□□□□□ -0.57
LCN2-205ENST00000487719 RRP1P56182 461 aaKnown RBP11.51□□□□□ -0.57
LCN2-205ENST00000487719 TNFAIP1Q13829 316 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 CCDC158Q5M9N0 1113 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 ANGEL2Q5VTE6 544 aaKnown RBP11.51□□□□□ -0.57
LCN2-205ENST00000487719 PAXIP1Q6ZW49 1069 aaPredicted RBP11.51□□□□□ -0.57
LCN2-205ENST00000487719 USP48Q86UV5 1035 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 TEKT1Q969V4 418 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 XAGE2Q96GT9 111 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 GPR108Q9NPR9 543 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 ZBTB40Q9NUA8 1239 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 TMOD2Q9NZR1 351 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 SERPINA10Q9UK55 444 aa11.51□□□□□ -0.57
LCN2-205ENST00000487719 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
LCN2-205ENST00000487719 AKAP11Q9UKA4 1901 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 MAST2Q6P0Q8 1798 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 WNT10BO00744 389 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 EGFRP00533 1210 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 UQCRFS1P1P0C7P4 283 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
LCN2-205ENST00000487719 CFAP100Q494V2 611 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 SPTY2D1Q68D10 685 aaPredicted RBP11.5□□□□□ -0.57
LCN2-205ENST00000487719 CCDC102BQ68D86 513 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 SLF2Q8IX21 1173 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 C2orf69Q8N8R5 385 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 MTMR14Q8NCE2 650 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
LCN2-205ENST00000487719 MYH7P12883 1935 aa11.5□□□□□ -0.57
LCN2-205ENST00000487719 PAPPA2Q9BXP8 1791 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 MYO5AQ9Y4I1 1855 aaKnown RBP11.49□□□□□ -0.57
LCN2-205ENST00000487719 TRAF5O00463 557 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 LDHBP07195 334 aaKnown RBP11.49□□□□□ -0.57
LCN2-205ENST00000487719 ECE1P42892 770 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 PHKA1P46020 1223 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 TIMM10P62072 90 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 NBPF9Q3BBW0 867 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 TNNI3KQ59H18 835 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 TTC39AQ5SRH9 613 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 DZIP1Q86YF9 867 aaKnown RBP11.49□□□□□ -0.57
LCN2-205ENST00000487719 CERS5Q8N5B7 392 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 KLRG1Q96E93 195 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 FPGT-TNNI3KV9GXZ4 949 aa11.49□□□□□ -0.57
LCN2-205ENST00000487719 PDS5AQ29RF7 1337 aaKnown RBP11.49□□□□□ -0.57
LCN2-205ENST00000487719 SPDYE2BA6NHP3 402 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 ADM5C9JUS6 153 aa11.48□□□□□ -0.57
LCN2-205ENST00000487719 RAB11FIP3O75154 756 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms