RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 MYOZ2Q9NPC6 264 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 MINPP1Q9UNW1 487 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 MYO3BQ8WXR4 1341 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 H7C1W4 665 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 SLC34A2O95436 690 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 SLC10A3P09131 477 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 CCT4P50991 539 aaKnown RBP10.92□□□□□ -0.66
PRKCB-208ENST00000487674 ZNF157P51786 506 aaPredicted RBP10.92□□□□□ -0.66
PRKCB-208ENST00000487674 FLIIQ13045 1269 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 SCARF1Q14162 830 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 GCKRQ14397 625 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 PLA2G12BQ9BX93 195 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 MYH16Q9H6N6 1097 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 SAGE1Q9NXZ1 904 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 A0A1B0GUL6 1792 aa10.92□□□□□ -0.66
PRKCB-208ENST00000487674 IGHMBP2P38935 993 aaKnown RBP10.91□□□□□ -0.66
PRKCB-208ENST00000487674 FKBP1BP68106 108 aa10.91□□□□□ -0.66
PRKCB-208ENST00000487674 MKRN3Q13064 507 aaKnown RBP10.91□□□□□ -0.66
PRKCB-208ENST00000487674 FKBP5Q13451 457 aaPredicted RBP10.91□□□□□ -0.66
PRKCB-208ENST00000487674 FAM161AQ3B820 660 aa10.91□□□□□ -0.66
PRKCB-208ENST00000487674 DACT2Q5SW24 774 aa10.91□□□□□ -0.66
PRKCB-208ENST00000487674 LINS1Q8NG48 757 aa10.91□□□□□ -0.66
PRKCB-208ENST00000487674 DNAAF4Q8WXU2 420 aa10.91□□□□□ -0.66
PRKCB-208ENST00000487674 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
PRKCB-208ENST00000487674 COA1Q9GZY4 146 aa10.91□□□□□ -0.66
PRKCB-208ENST00000487674 LEMD3Q9Y2U8 911 aa10.91□□□□□ -0.66
PRKCB-208ENST00000487674 WTIPA6NIX2 430 aaPredicted RBP10.9□□□□□ -0.66
PRKCB-208ENST00000487674 CCDC85CA6NKD9 419 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 SNPHO15079 494 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 ITGA6P23229 1130 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 CASP7P55210 303 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 KIF23Q02241 960 aaPredicted RBP10.9□□□□□ -0.66
PRKCB-208ENST00000487674 STRIP1Q5VSL9 837 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 OGFOD1Q8N543 542 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 MCOLN1Q9GZU1 580 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 ANKRD2Q9GZV1 360 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 MRS2Q9HD23 443 aa10.9□□□□□ -0.66
PRKCB-208ENST00000487674 ZNF804BA4D1E1 1349 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 CSF1RP07333 972 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 PSEN1P49768 467 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 MMP14P50281 582 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 RASAL3Q86YV0 1011 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 WDR63Q8IWG1 891 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 MARVELD3Q96A59 401 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 MPHOSPH8Q99549 860 aa10.89□□□□□ -0.67
PRKCB-208ENST00000487674 TMEM121BQ9BXQ6 578 aaPredicted RBP10.89□□□□□ -0.67
PRKCB-208ENST00000487674 KLRK1P26718 216 aa10.88□□□□□ -0.67
PRKCB-208ENST00000487674 DGKZQ13574 1117 aa10.88□□□□□ -0.67
PRKCB-208ENST00000487674 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
PRKCB-208ENST00000487674 TXNRD3Q86VQ6 643 aa10.88□□□□□ -0.67
PRKCB-208ENST00000487674 MXD3Q9BW11 206 aa10.88□□□□□ -0.67
PRKCB-208ENST00000487674 RNF186Q9NXI6 227 aa10.88□□□□□ -0.67
PRKCB-208ENST00000487674 COL1A1P02452 1464 aaPredicted RBP10.87□□□□□ -0.67
PRKCB-208ENST00000487674 ECM29Q5VYK3 1845 aa10.87□□□□□ -0.67
PRKCB-208ENST00000487674 ANKRD18BA2A2Z9 1011 aa10.87□□□□□ -0.67
PRKCB-208ENST00000487674 WNT10BO00744 389 aa10.87□□□□□ -0.67
PRKCB-208ENST00000487674 VAMP4O75379 141 aa10.87□□□□□ -0.67
PRKCB-208ENST00000487674 KCNJ4P48050 445 aa10.87□□□□□ -0.67
PRKCB-208ENST00000487674 RGS19P49795 217 aa10.87□□□□□ -0.67
PRKCB-208ENST00000487674 CHRNDQ07001 517 aa10.87□□□□□ -0.67
PRKCB-208ENST00000487674 CSRNP1Q96S65 589 aa10.87□□□□□ -0.67
PRKCB-208ENST00000487674 ANP32CO43423 234 aa10.86□□□□□ -0.67
PRKCB-208ENST00000487674 TRPA1O75762 1119 aa10.86□□□□□ -0.67
PRKCB-208ENST00000487674 SASH1O94885 1247 aa10.86□□□□□ -0.67
PRKCB-208ENST00000487674 NF2P35240 595 aa10.86□□□□□ -0.67
PRKCB-208ENST00000487674 MLLT1Q03111 559 aaPredicted RBP10.86□□□□□ -0.67
PRKCB-208ENST00000487674 EXOSC9Q06265 439 aaKnown RBP10.86□□□□□ -0.67
PRKCB-208ENST00000487674 TTLL5Q6EMB2 1281 aa10.86□□□□□ -0.67
PRKCB-208ENST00000487674 APOBEC3FQ8IUX4 373 aaKnown RBP10.86□□□□□ -0.67
PRKCB-208ENST00000487674 HDAC9Q9UKV0 1011 aa10.86□□□□□ -0.67
PRKCB-208ENST00000487674 SCAF8Q9UPN6 1271 aaKnown RBP10.86□□□□□ -0.67
PRKCB-208ENST00000487674 IRS2Q9Y4H2 1338 aa10.85□□□□□ -0.67
PRKCB-208ENST00000487674 GTF2IP78347 998 aa10.85□□□□□ -0.67
PRKCB-208ENST00000487674 FOXO4P98177 505 aa10.85□□□□□ -0.67
PRKCB-208ENST00000487674 IFIT5Q13325 482 aaKnown RBP10.85□□□□□ -0.67
PRKCB-208ENST00000487674 BEND3Q5T5X7 828 aa10.85□□□□□ -0.67
PRKCB-208ENST00000487674 C15orf52Q6ZUT6 534 aaKnown RBP10.85□□□□□ -0.67
PRKCB-208ENST00000487674 MOB2Q70IA6 237 aa10.85□□□□□ -0.67
PRKCB-208ENST00000487674 KIAA0825Q8IV33 1275 aa10.85□□□□□ -0.67
PRKCB-208ENST00000487674 ARAP2Q8WZ64 1704 aa10.84□□□□□ -0.67
PRKCB-208ENST00000487674 F6X3S4 739 aa10.84□□□□□ -0.67
PRKCB-208ENST00000487674 UBE2Q2LH0YL09 131 aa10.84□□□□□ -0.67
PRKCB-208ENST00000487674 TTLL12Q14166 644 aaPredicted RBP10.84□□□□□ -0.67
PRKCB-208ENST00000487674 PRAMEF18Q5VWM3 479 aa10.84□□□□□ -0.67
PRKCB-208ENST00000487674 ZBED3Q96IU2 234 aaPredicted RBP10.84□□□□□ -0.67
PRKCB-208ENST00000487674 CD209Q9NNX6 404 aa10.84□□□□□ -0.67
PRKCB-208ENST00000487674 CHMP3Q9Y3E7 222 aa10.84□□□□□ -0.67
PRKCB-208ENST00000487674 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
PRKCB-208ENST00000487674 LAMB1P07942 1786 aa10.84□□□□□ -0.67
PRKCB-208ENST00000487674 GRM8O00222 908 aa10.83□□□□□ -0.68
PRKCB-208ENST00000487674 ZEB1P37275 1124 aaPredicted RBP10.83□□□□□ -0.68
PRKCB-208ENST00000487674 ZNF804AQ7Z570 1209 aa10.83□□□□□ -0.68
PRKCB-208ENST00000487674 CTU1Q7Z7A3 348 aaKnown RBP10.83□□□□□ -0.68
PRKCB-208ENST00000487674 SNAP23O00161 211 aa10.82□□□□□ -0.68
PRKCB-208ENST00000487674 TAF5LO75529 589 aa10.82□□□□□ -0.68
PRKCB-208ENST00000487674 IL1R1P14778 569 aa10.82□□□□□ -0.68
PRKCB-208ENST00000487674 FKBP1AP62942 108 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms