RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SGPL1O95470 568 aa15.42■□□□□ 0.06
TRIM56-204ENST00000487252 HSPA5P11021 654 aaKnown RBP15.42■□□□□ 0.06
TRIM56-204ENST00000487252 CCL15Q16663 113 aa15.42■□□□□ 0.06
TRIM56-204ENST00000487252 TDHQ8IZJ6 230 aa15.42■□□□□ 0.06
TRIM56-204ENST00000487252 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
TRIM56-204ENST00000487252 XAGE3Q8WTP9 111 aa15.42■□□□□ 0.06
TRIM56-204ENST00000487252 ZCCHC17Q9NP64 241 aaKnown RBP15.42■□□□□ 0.06
TRIM56-204ENST00000487252 SEC31BQ9NQW1 1179 aa15.42■□□□□ 0.06
TRIM56-204ENST00000487252 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
TRIM56-204ENST00000487252 ATP2B4P23634 1241 aa15.41■□□□□ 0.06
TRIM56-204ENST00000487252 GTF2A2P52657 109 aa15.41■□□□□ 0.06
TRIM56-204ENST00000487252 EIF4G2P78344 907 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRIM56-204ENST00000487252 NBPF12Q5TAG4 269 aaPredicted RBP15.41■□□□□ 0.06
TRIM56-204ENST00000487252 MTMR14Q8NCE2 650 aa15.41■□□□□ 0.06
TRIM56-204ENST00000487252 HOXD11P31277 338 aaPredicted RBP15.4■□□□□ 0.06
TRIM56-204ENST00000487252 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
TRIM56-204ENST00000487252 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
TRIM56-204ENST00000487252 TRIM47Q96LD4 638 aa15.4■□□□□ 0.06
TRIM56-204ENST00000487252 ELP3Q9H9T3 547 aa15.4■□□□□ 0.06
TRIM56-204ENST00000487252 IRS4O14654 1257 aaPredicted RBP15.39■□□□□ 0.05
TRIM56-204ENST00000487252 OSBPP22059 807 aa15.39■□□□□ 0.05
TRIM56-204ENST00000487252 AIMP1Q12904 312 aaKnown RBP15.39■□□□□ 0.05
TRIM56-204ENST00000487252 C17orf99Q6UX52 265 aa15.39■□□□□ 0.05
TRIM56-204ENST00000487252 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.39■□□□□ 0.05
TRIM56-204ENST00000487252 HELBQ8NG08 1087 aaPredicted RBP15.39■□□□□ 0.05
TRIM56-204ENST00000487252 CNKSR2Q8WXI2 1034 aa15.39■□□□□ 0.05
TRIM56-204ENST00000487252 RAPGEFL1Q9UHV5 662 aa15.39■□□□□ 0.05
TRIM56-204ENST00000487252 COL2A1P02458 1487 aaPredicted RBP15.39■□□□□ 0.05
TRIM56-204ENST00000487252 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
TRIM56-204ENST00000487252 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
TRIM56-204ENST00000487252 COA1Q9GZY4 146 aa15.38■□□□□ 0.05
TRIM56-204ENST00000487252 UNC93B1Q9H1C4 597 aa15.38■□□□□ 0.05
TRIM56-204ENST00000487252 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
TRIM56-204ENST00000487252 U2AF1L5P0DN76 240 aaPredicted RBP15.37■□□□□ 0.05
TRIM56-204ENST00000487252 PSMC4P43686 418 aa15.37■□□□□ 0.05
TRIM56-204ENST00000487252 UBXN2AP68543 259 aa15.37■□□□□ 0.05
TRIM56-204ENST00000487252 U2AF1Q01081 240 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRIM56-204ENST00000487252 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
TRIM56-204ENST00000487252 RAET1EQ8TD07 263 aa15.37■□□□□ 0.05
TRIM56-204ENST00000487252 CDH23Q9H251 3354 aa15.37■□□□□ 0.05
TRIM56-204ENST00000487252 WDHD1O75717 1129 aaPredicted RBP15.36■□□□□ 0.05
TRIM56-204ENST00000487252 HOXD10P28358 340 aa15.36■□□□□ 0.05
TRIM56-204ENST00000487252 MAGEA10P43363 369 aaPredicted RBP15.36■□□□□ 0.05
TRIM56-204ENST00000487252 DLGAP5Q15398 846 aa15.36■□□□□ 0.05
TRIM56-204ENST00000487252 TTLL5Q6EMB2 1281 aa15.36■□□□□ 0.05
TRIM56-204ENST00000487252 PLBD2Q8NHP8 589 aa15.36■□□□□ 0.05
TRIM56-204ENST00000487252 SYMPKQ92797 1274 aaKnown RBP15.36■□□□□ 0.05
TRIM56-204ENST00000487252 CRISPLD2Q9H0B8 497 aa15.36■□□□□ 0.05
TRIM56-204ENST00000487252 NUDCQ9Y266 331 aa15.36■□□□□ 0.05
TRIM56-204ENST00000487252 BTBD19C9JJ37 291 aa15.35■□□□□ 0.05
TRIM56-204ENST00000487252 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
TRIM56-204ENST00000487252 PCDHAC2Q9Y5I4 1007 aa15.35■□□□□ 0.05
TRIM56-204ENST00000487252 MYPNQ86TC9 1320 aa15.35■□□□□ 0.05
TRIM56-204ENST00000487252 ADGRA2Q96PE1 1338 aa15.35■□□□□ 0.05
TRIM56-204ENST00000487252 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-204ENST00000487252 VGLL4Q14135 290 aa15.34■□□□□ 0.05
TRIM56-204ENST00000487252 RASA3Q14644 834 aa15.34■□□□□ 0.05
TRIM56-204ENST00000487252 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-204ENST00000487252 SLAIN1Q8ND83 568 aa15.34■□□□□ 0.05
TRIM56-204ENST00000487252 FAM122AQ96E09 287 aa15.34■□□□□ 0.05
TRIM56-204ENST00000487252 PAWRQ96IZ0 340 aaKnown RBP15.34■□□□□ 0.05
TRIM56-204ENST00000487252 PAK6Q9NQU5 681 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-204ENST00000487252 ZMYND8Q9ULU4 1186 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-204ENST00000487252 AOX1Q06278 1338 aa15.34■□□□□ 0.05
TRIM56-204ENST00000487252 IRS2Q9Y4H2 1338 aa15.34■□□□□ 0.05
TRIM56-204ENST00000487252 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 ATP5J2-PTCD1G3V325 749 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 CETPP11597 493 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 CCDC152Q4G0S7 254 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 C7orf61Q8IZ16 206 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 ZBTB38Q8NAP3 1195 aaPredicted RBP15.33■□□□□ 0.04
TRIM56-204ENST00000487252 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRIM56-204ENST00000487252 FBXW7Q969H0 707 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 PRMT6Q96LA8 375 aaPredicted RBP15.33■□□□□ 0.04
TRIM56-204ENST00000487252 CFAP53Q96M91 514 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 FAM205AQ6ZU69 1335 aa15.33■□□□□ 0.04
TRIM56-204ENST00000487252 MGAMO43451 1857 aa15.32■□□□□ 0.04
TRIM56-204ENST00000487252 CLRN2A0PK11 232 aa15.32■□□□□ 0.04
TRIM56-204ENST00000487252 SPDYE5A6NIY4 337 aa15.32■□□□□ 0.04
TRIM56-204ENST00000487252 NECAB2Q7Z6G3 386 aa15.32■□□□□ 0.04
TRIM56-204ENST00000487252 ANKRD18AQ8IVF6 992 aa15.32■□□□□ 0.04
TRIM56-204ENST00000487252 CERS5Q8N5B7 392 aa15.32■□□□□ 0.04
TRIM56-204ENST00000487252 TEPSINQ96N21 525 aa15.32■□□□□ 0.04
TRIM56-204ENST00000487252 BIN2Q9UBW5 565 aaPredicted RBP15.32■□□□□ 0.04
TRIM56-204ENST00000487252 MYO1BO43795 1136 aa15.31■□□□□ 0.04
TRIM56-204ENST00000487252 TFRCP02786 760 aaKnown RBP15.31■□□□□ 0.04
TRIM56-204ENST00000487252 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
TRIM56-204ENST00000487252 CCT4P50991 539 aaKnown RBP15.31■□□□□ 0.04
TRIM56-204ENST00000487252 MAP3K9P80192 1104 aa15.31■□□□□ 0.04
TRIM56-204ENST00000487252 PRKCZQ05513 592 aa15.31■□□□□ 0.04
TRIM56-204ENST00000487252 DIS3LQ8TF46 1054 aaKnown RBP15.31■□□□□ 0.04
TRIM56-204ENST00000487252 UBE2OQ9C0C9 1292 aaKnown RBP15.31■□□□□ 0.04
TRIM56-204ENST00000487252 MINPP1Q9UNW1 487 aa15.31■□□□□ 0.04
TRIM56-204ENST00000487252 TNFRSF10AO00220 468 aa15.3■□□□□ 0.04
TRIM56-204ENST00000487252 FMNL1O95466 1100 aaPredicted RBP15.3■□□□□ 0.04
TRIM56-204ENST00000487252 GTF2IP78347 998 aa15.3■□□□□ 0.04
TRIM56-204ENST00000487252 MAFAQ8NHW3 353 aaPredicted RBP15.3■□□□□ 0.04
TRIM56-204ENST00000487252 DEFB118Q96PH6 123 aa15.3■□□□□ 0.04
TRIM56-204ENST00000487252 CPA4Q9UI42 421 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms