RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 TMEM2Q9UHN6 1383 aa8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 RGS12O14924 1447 aa8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 NEURL4Q96JN8 1562 aa8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 NHSL1Q5SYE7 1610 aa8.94□□□□□ -0.98
RTFDC1-209ENST00000487211 XYLBO75191 536 aa8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 FAM157BP0CG42 384 aa8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 ITGA6P23229 1130 aa8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 SFSWAPQ12872 951 aaKnown RBP8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 RGL3Q3MIN7 710 aa8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 ZNF438Q7Z4V0 828 aa8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 EID1Q9Y6B2 187 aa8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 PIK3C2BO00750 1634 aa8.93□□□□□ -0.98
RTFDC1-209ENST00000487211 ZNF142P52746 1687 aaPredicted RBP8.92□□□□□ -0.98
RTFDC1-209ENST00000487211 ARHGAP23Q9P227 1491 aa8.92□□□□□ -0.98
RTFDC1-209ENST00000487211 LDHBP07195 334 aaKnown RBP8.92□□□□□ -0.98
RTFDC1-209ENST00000487211 NEFLP07196 543 aa8.92□□□□□ -0.98
RTFDC1-209ENST00000487211 ORC1Q13415 861 aa8.92□□□□□ -0.98
RTFDC1-209ENST00000487211 MRRFQ96E11 262 aaKnown RBP8.92□□□□□ -0.98
RTFDC1-209ENST00000487211 PNMA6FA0A0J9YX94 578 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 MAPTP10636 758 aaKnown RBP8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 C1QTNF8P60827 252 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 ATP2B2Q01814 1243 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 UBAP2LQ14157 1087 aaKnown RBP8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 PDE12Q6L8Q7 609 aaKnown RBP8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 XKR5Q6UX68 686 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 ZNF837Q96EG3 531 aaPredicted RBP8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 CSRNP1Q96S65 589 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 SIN3AQ96ST3 1273 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 ELP3Q9H9T3 547 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 WWC3Q9ULE0 1092 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 UBR1Q8IWV7 1749 aa8.91□□□□□ -0.98
RTFDC1-209ENST00000487211 SLIT1O75093 1534 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 TRPM2O94759 1503 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 RIMS2Q9UQ26 1411 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 DHX57Q6P158 1386 aaKnown RBP8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 EIF1AYO14602 144 aaKnown RBP8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 LCE2BO14633 110 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 EFSO43281 561 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 BNIP3LO60238 219 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 TNFRSF21O75509 655 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 KCNQ4P56696 695 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 TNP2Q05952 138 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 ENOX2Q16206 610 aaKnown RBP8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 GTPBP3Q969Y2 492 aaKnown RBP8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 GMCL1Q96IK5 515 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 SLC26A8Q96RN1 970 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 TMEM63CQ9P1W3 806 aa8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 FOXD3Q9UJU5 478 aaPredicted RBP8.9□□□□□ -0.98
RTFDC1-209ENST00000487211 TMEM131LA2VDJ0 1609 aa8.9□□□□□ -0.99
RTFDC1-209ENST00000487211 CLTCL1P53675 1640 aa8.9□□□□□ -0.99
RTFDC1-209ENST00000487211 CCDC144AA2RUR9 1427 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 ZFYVE9O95405 1425 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 XIRP1Q702N8 1843 aaKnown RBP8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 SPHKAPQ2M3C7 1700 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 PPFIA3O75145 1194 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 EGFRP00533 1210 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 KRT25Q7Z3Z0 450 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 ABHD17AQ96GS6 310 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 SETDB2Q96T68 719 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 C11orf16Q9NQ32 467 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 STRN4Q9NRL3 753 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 NDFIP2Q9NV92 336 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 MARK1Q9P0L2 795 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 MED14O60244 1454 aa8.89□□□□□ -0.99
RTFDC1-209ENST00000487211 NPHP4O75161 1426 aaPredicted RBP8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 RPGRIP1LQ68CZ1 1315 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 CDC14CA4D256 554 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 PHACTR2O75167 634 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 PRPF40AO75400 957 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 SASH3O75995 380 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 FGD1P98174 961 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 XPCQ01831 940 aaPredicted RBP8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 LAMC2Q13753 1193 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 CCINQ13939 588 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 NLRP13Q86W25 1043 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 SNX29Q8TEQ0 813 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 BCL11AQ9H165 835 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 ADGRB3O60242 1522 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 SCAF11Q99590 1463 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 SPATA31E1Q6ZUB1 1445 aa8.88□□□□□ -0.99
RTFDC1-209ENST00000487211 CPNE3O75131 537 aaKnown RBP8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 CD33P20138 364 aa8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 NEUROD1Q13562 356 aa8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 GRIN2CQ14957 1233 aa8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 TTC39BQ5VTQ0 682 aaPredicted RBP8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 ALG1LQ6GMV1 187 aa8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 DUSP9Q99956 384 aaKnown RBP8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 GSX2Q9BZM3 304 aa8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 DNAJC25Q9H1X3 360 aa8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 KIAA1522Q9P206 1035 aaPredicted RBP8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 PHF24Q9UPV7 400 aa8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 BCL9LQ86UU0 1499 aa8.87□□□□□ -0.99
RTFDC1-209ENST00000487211 ADGRF5Q8IZF2 1346 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 KDM5AP29375 1690 aaKnown RBP8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 POTECB2RU33 542 aa8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 TARSP26639 723 aaKnown RBP8.86□□□□□ -0.99
RTFDC1-209ENST00000487211 USPL1Q5W0Q7 1092 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms