RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 SP8Q8IXZ3 490 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 SEC62Q99442 399 aaKnown RBP7.37□□□□□ -1.23
VAMP3-203ENST00000487194 PIH1D3Q9NQM4 214 aaKnown RBP7.37□□□□□ -1.23
VAMP3-203ENST00000487194 PODXL2Q9NZ53 605 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 CTNNA3Q9UI47 895 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 GGA1Q9UJY5 639 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 PALD1Q9ULE6 856 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 COL4A1P02462 1669 aa7.37□□□□□ -1.23
VAMP3-203ENST00000487194 TAF1P21675 1872 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 H0YIN7 160 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 PPEF1O14829 653 aaPredicted RBP7.36□□□□□ -1.23
VAMP3-203ENST00000487194 SLC27A2O14975 620 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 PDE6AP16499 860 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 YY1P25490 414 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 MSL1Q68DK7 614 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 STYK1Q6J9G0 422 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 ZGPATQ8N5A5 531 aaKnown RBP7.36□□□□□ -1.23
VAMP3-203ENST00000487194 OSBP2Q969R2 916 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 LRP2BPQ9P2M1 347 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 NSFL1CQ9UNZ2 370 aaKnown RBP7.36□□□□□ -1.23
VAMP3-203ENST00000487194 ATP6V0A2Q9Y487 856 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 CYP46A1Q9Y6A2 500 aa7.36□□□□□ -1.23
VAMP3-203ENST00000487194 MYH7P12883 1935 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 ZNF532Q9HCE3 1301 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 IRS2Q9Y4H2 1338 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 TCRBV5S4A2TA0A5A2 114 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 M0R2C6 588 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 GPAA1O43292 621 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 UFL1O94874 794 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 HSP90AA1P07900 732 aaKnown RBP7.35□□□□□ -1.23
VAMP3-203ENST00000487194 HMGB1P09429 215 aaKnown RBP7.35□□□□□ -1.23
VAMP3-203ENST00000487194 HSPD1P10809 573 aaKnown RBP7.35□□□□□ -1.23
VAMP3-203ENST00000487194 GNAT2P19087 354 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 GPSM2P81274 684 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 SPTY2D1Q68D10 685 aaPredicted RBP7.35□□□□□ -1.23
VAMP3-203ENST00000487194 CCDC129Q6ZRS4 1044 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 C2CD5Q86YS7 1000 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 RASEFQ8IZ41 740 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 MAGEB6Q8N7X4 407 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 WDR66Q8TBY9 1149 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 CNKSR1Q969H4 720 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 AIDAQ96BJ3 306 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 JAKMIP1Q96N16 626 aaKnown RBP7.35□□□□□ -1.23
VAMP3-203ENST00000487194 PUS7LQ9H0K6 701 aaKnown RBP7.35□□□□□ -1.23
VAMP3-203ENST00000487194 ZSWIM6Q9HCJ5 1215 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 RAI14Q9P0K7 980 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 WWC3Q9ULE0 1092 aa7.35□□□□□ -1.23
VAMP3-203ENST00000487194 ANKRD31Q8N7Z5 1873 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 RPAP1Q9BWH6 1393 aaPredicted RBP7.34□□□□□ -1.23
VAMP3-203ENST00000487194 DOCK2Q92608 1830 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 SALL1Q9NSC2 1324 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 CHGBP05060 677 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 CASTP20810 708 aaKnown RBP7.34□□□□□ -1.23
VAMP3-203ENST00000487194 ANKRD1Q15327 319 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 IMMTQ16891 758 aaKnown RBP7.34□□□□□ -1.23
VAMP3-203ENST00000487194 VPS53Q5VIR6 699 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 CC2D2BQ6DHV5 1058 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 RUFY3Q7L099 469 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 TDRD7Q8NHU6 1098 aaKnown RBP7.34□□□□□ -1.23
VAMP3-203ENST00000487194 TBC1D16Q8TBP0 767 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 UPF3BQ9BZI7 483 aaKnown RBP7.34□□□□□ -1.23
VAMP3-203ENST00000487194 NACAP1Q9BZK3 213 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 ALDH8A1Q9H2A2 487 aaPredicted RBP7.34□□□□□ -1.23
VAMP3-203ENST00000487194 ABCF2Q9UG63 623 aa7.34□□□□□ -1.23
VAMP3-203ENST00000487194 CIZ1Q9ULV3 898 aaPredicted RBP7.34□□□□□ -1.23
VAMP3-203ENST00000487194 IQSEC3Q9UPP2 1182 aaPredicted RBP7.34□□□□□ -1.23
VAMP3-203ENST00000487194 ZMYM6O95789 1325 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 LRRC37AA6NMS7 1700 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 WTIPA6NIX2 430 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 C6orf229H3BNL8 230 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 CD2BP2O95400 341 aaKnown RBP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 CYP21A2P08686 494 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 IL1R1P14778 569 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 CYP7A1P22680 504 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 KLRK1P26718 216 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 CHAF1AQ13111 956 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 ALX1Q15699 326 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 SLFNL1Q499Z3 407 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 GRIPAP1Q4V328 841 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 NAA16Q6N069 864 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 BLOC1S2Q6QNY1 142 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 DPP8Q6V1X1 898 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 MPNDQ8N594 471 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 ZNF622Q969S3 477 aaKnown RBP eCLIP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 ZSCAN31Q96LW9 406 aaPredicted RBP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 TTC14Q96N46 770 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 NEK1Q96PY6 1258 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 STRBPQ96SI9 672 aaKnown RBP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 EYA3Q99504 573 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
VAMP3-203ENST00000487194 PDRG1Q9NUG6 133 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 CHMP5Q9NZZ3 219 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 DUOX1Q9NRD9 1551 aa7.33□□□□□ -1.24
VAMP3-203ENST00000487194 COL1A1P02452 1464 aaPredicted RBP7.32□□□□□ -1.24
VAMP3-203ENST00000487194 MAGEB6P1A0A0J9YX57 407 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 PATL2C9JE40 543 aaKnown RBP7.32□□□□□ -1.24
VAMP3-203ENST00000487194 ZNF213O14771 459 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 MBD4O95243 580 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 FGAP02671 866 aa7.32□□□□□ -1.24
VAMP3-203ENST00000487194 APPP05067 770 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms