RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 DLGAP3O95886 979 aa6.97□□□□□ -1.29
SNRNP27-204ENST00000487029 ATG3Q9NT62 314 aa6.97□□□□□ -1.29
SNRNP27-204ENST00000487029 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
SNRNP27-204ENST00000487029 PRNPP04156 253 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 RXRBP28702 533 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 ADMP35318 185 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 CABP4P57796 275 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 POU5F2Q8N7G0 328 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 C1orf127Q8N9H9 656 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 STK32AQ8WU08 396 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 OSBPL1AQ9BXW6 950 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 DZANK1Q9NVP4 752 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 CXXC1Q9P0U4 656 aaPredicted RBP6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 STIM2Q9P246 746 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 SOX13Q9UN79 622 aa6.96□□□□□ -1.3
SNRNP27-204ENST00000487029 SOX1O00570 391 aaPredicted RBP6.95□□□□□ -1.3
SNRNP27-204ENST00000487029 TIAF1O95411 115 aa6.95□□□□□ -1.3
SNRNP27-204ENST00000487029 DRD2P14416 443 aa6.95□□□□□ -1.3
SNRNP27-204ENST00000487029 ITGB5P18084 799 aa6.95□□□□□ -1.3
SNRNP27-204ENST00000487029 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
SNRNP27-204ENST00000487029 ATCAYQ86WG3 371 aa6.95□□□□□ -1.3
SNRNP27-204ENST00000487029 C12orf50Q8NA57 414 aaPredicted RBP6.95□□□□□ -1.3
SNRNP27-204ENST00000487029 NUDT16Q96DE0 195 aaKnown RBP6.95□□□□□ -1.3
SNRNP27-204ENST00000487029 FAM177BA6PVY3 158 aa6.94□□□□□ -1.3
SNRNP27-204ENST00000487029 PDE2AO00408 941 aaPredicted RBP6.94□□□□□ -1.3
SNRNP27-204ENST00000487029 C19orf57Q0VDD7 668 aa6.94□□□□□ -1.3
SNRNP27-204ENST00000487029 NFKBIBQ15653 356 aa6.94□□□□□ -1.3
SNRNP27-204ENST00000487029 NUTM2GQ5VZR2 741 aa6.94□□□□□ -1.3
SNRNP27-204ENST00000487029 TP53INP2Q8IXH6 220 aa6.94□□□□□ -1.3
SNRNP27-204ENST00000487029 SMG8Q8ND04 991 aaKnown RBP6.94□□□□□ -1.3
SNRNP27-204ENST00000487029 FBLIM1Q8WUP2 373 aa6.94□□□□□ -1.3
SNRNP27-204ENST00000487029 FAM95CA0A1B0GW59 222 aa6.93□□□□□ -1.3
SNRNP27-204ENST00000487029 PDE12Q6L8Q7 609 aaKnown RBP6.93□□□□□ -1.3
SNRNP27-204ENST00000487029 ZNF438Q7Z4V0 828 aa6.93□□□□□ -1.3
SNRNP27-204ENST00000487029 ASIC4Q96FT7 647 aa6.93□□□□□ -1.3
SNRNP27-204ENST00000487029 LOC100289279A0A1B0GTE1 492 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 A6NHS1 94 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 VN1R5Q7Z5H4 357 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 VSIG10LQ86VR7 867 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 GIMAP7Q8NHV1 300 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 GATA6Q92908 595 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 FBXL18Q96ME1 805 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 SUGCTQ9HAC7 445 aa6.92□□□□□ -1.3
SNRNP27-204ENST00000487029 FAM170BA6NMN3 283 aa6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 CYP26A1O43174 497 aa6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 CES1P23141 567 aa6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 C2CD4AQ8NCU7 369 aaPredicted RBP6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 USP26Q9BXU7 913 aa6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 GGNBP2Q9H3C7 697 aa6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 PAK6Q9NQU5 681 aaPredicted RBP6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 SLAIN2Q9P270 581 aa6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 PRKAG2Q9UGJ0 569 aa6.91□□□□□ -1.3
SNRNP27-204ENST00000487029 ARL4DP49703 201 aa6.9□□□□□ -1.3
SNRNP27-204ENST00000487029 ELOAQ14241 798 aaKnown RBP6.9□□□□□ -1.3
SNRNP27-204ENST00000487029 ZAR1Q86SH2 424 aa6.9□□□□□ -1.3
SNRNP27-204ENST00000487029 TMEM102Q8N9M5 508 aaPredicted RBP6.9□□□□□ -1.3
SNRNP27-204ENST00000487029 NXPE3Q969Y0 559 aa6.9□□□□□ -1.3
SNRNP27-204ENST00000487029 BSDC1Q9NW68 430 aaPredicted RBP6.9□□□□□ -1.3
SNRNP27-204ENST00000487029 ZNF777Q9ULD5 760 aaPredicted RBP6.9□□□□□ -1.3
SNRNP27-204ENST00000487029 JUNBP17275 347 aaPredicted RBP6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 USP11P51784 963 aa6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 SRPK2P78362 688 aaKnown RBP6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 IKBKEQ14164 716 aa6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 CPSF6Q16630 551 aaKnown RBP eCLIP6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 PAOXQ6QHF9 649 aa6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 TBC1D32Q96NH3 1257 aa6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 OSMRQ99650 979 aa6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 CYP4F12Q9HCS2 524 aa6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 SEPT3Q9UH03 358 aa6.89□□□□□ -1.31
SNRNP27-204ENST00000487029 PAPLNO95428 1278 aa6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 ZNF648Q5T619 568 aaPredicted RBP6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 XKR5Q6UX68 686 aa6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 ABTB2Q8N961 1025 aa6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 FLCNQ8NFG4 579 aa6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 BSNDQ8WZ55 320 aa6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 EDEM1Q92611 657 aa6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 EZH1Q92800 747 aaPredicted RBP6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 ZC3H7BQ9UGR2 993 aaKnown RBP6.88□□□□□ -1.31
SNRNP27-204ENST00000487029 EXOSC6Q5RKV6 272 aaKnown RBP6.87□□□□□ -1.31
SNRNP27-204ENST00000487029 TMEM164Q5U3C3 297 aa6.87□□□□□ -1.31
SNRNP27-204ENST00000487029 WFDC3Q8IUB2 231 aa6.87□□□□□ -1.31
SNRNP27-204ENST00000487029 METTL22Q9BUU2 404 aaPredicted RBP6.87□□□□□ -1.31
SNRNP27-204ENST00000487029 DNM1Q05193 864 aaKnown RBP6.86□□□□□ -1.31
SNRNP27-204ENST00000487029 SOX4Q06945 474 aaPredicted RBP6.86□□□□□ -1.31
SNRNP27-204ENST00000487029 ZNF124Q15973 351 aa6.86□□□□□ -1.31
SNRNP27-204ENST00000487029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
SNRNP27-204ENST00000487029 CARMIL2Q6F5E8 1435 aa6.85□□□□□ -1.31
SNRNP27-204ENST00000487029 EREGO14944 169 aa6.85□□□□□ -1.31
SNRNP27-204ENST00000487029 ESRRAP11474 423 aaPredicted RBP6.85□□□□□ -1.31
SNRNP27-204ENST00000487029 ZNF765Q7L2R6 523 aa6.85□□□□□ -1.31
SNRNP27-204ENST00000487029 NRSN2Q9GZP1 204 aa6.85□□□□□ -1.31
SNRNP27-204ENST00000487029 LRRC4CQ9HCJ2 640 aa6.85□□□□□ -1.31
SNRNP27-204ENST00000487029 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
SNRNP27-204ENST00000487029 PDGFAP04085 211 aa6.84□□□□□ -1.31
SNRNP27-204ENST00000487029 CTSBP07858 339 aa6.84□□□□□ -1.31
SNRNP27-204ENST00000487029 NFICP08651 508 aa6.84□□□□□ -1.31
SNRNP27-204ENST00000487029 C8orf34Q49A92 452 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms