RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 WDR62O43379 1518 aa6.94□□□□□ -1.3
CDC7-204ENST00000486509 BAZ1BQ9UIG0 1483 aaKnown RBP6.93□□□□□ -1.3
CDC7-204ENST00000486509 PLCB3Q01970 1234 aa6.93□□□□□ -1.3
CDC7-204ENST00000486509 MBTPS1Q14703 1052 aa6.93□□□□□ -1.3
CDC7-204ENST00000486509 IGF2-ASQ6U949 168 aa6.93□□□□□ -1.3
CDC7-204ENST00000486509 CCNJLQ8IV13 435 aa6.93□□□□□ -1.3
CDC7-204ENST00000486509 MAP4K3Q8IVH8 894 aa6.93□□□□□ -1.3
CDC7-204ENST00000486509 BSNDQ8WZ55 320 aa6.93□□□□□ -1.3
CDC7-204ENST00000486509 CARD10Q9BWT7 1032 aa6.93□□□□□ -1.3
CDC7-204ENST00000486509 H3BRJ5 948 aa6.92□□□□□ -1.3
CDC7-204ENST00000486509 FSCN2O14926 492 aa6.92□□□□□ -1.3
CDC7-204ENST00000486509 GRIA4P48058 902 aa6.92□□□□□ -1.3
CDC7-204ENST00000486509 FMR1Q06787 632 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDC7-204ENST00000486509 FOXD4L6Q3SYB3 417 aaPredicted RBP6.92□□□□□ -1.3
CDC7-204ENST00000486509 HGSNATQ68CP4 663 aa6.92□□□□□ -1.3
CDC7-204ENST00000486509 FOXD4L3Q6VB84 417 aaPredicted RBP6.92□□□□□ -1.3
CDC7-204ENST00000486509 ZSCAN29Q8IWY8 852 aaPredicted RBP6.92□□□□□ -1.3
CDC7-204ENST00000486509 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
CDC7-204ENST00000486509 EPS8L3Q8TE67 593 aaKnown RBP6.92□□□□□ -1.3
CDC7-204ENST00000486509 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
CDC7-204ENST00000486509 KCNK4Q9NYG8 393 aa6.92□□□□□ -1.3
CDC7-204ENST00000486509 MRC2Q9UBG0 1479 aa6.92□□□□□ -1.3
CDC7-204ENST00000486509 GATA4P43694 442 aa6.91□□□□□ -1.3
CDC7-204ENST00000486509 ENOX2Q16206 610 aaKnown RBP6.91□□□□□ -1.3
CDC7-204ENST00000486509 SPRED3Q2MJR0 410 aa6.91□□□□□ -1.3
CDC7-204ENST00000486509 PI16Q6UXB8 463 aa6.91□□□□□ -1.3
CDC7-204ENST00000486509 KLHDC7BQ96G42 594 aa6.91□□□□□ -1.3
CDC7-204ENST00000486509 USP21Q9UK80 565 aa6.91□□□□□ -1.3
CDC7-204ENST00000486509 A0A096LPE4 126 aa6.9□□□□□ -1.3
CDC7-204ENST00000486509 PNMA6FA0A0J9YX94 578 aa6.9□□□□□ -1.3
CDC7-204ENST00000486509 A0A1W2PPZ6 126 aa6.9□□□□□ -1.3
CDC7-204ENST00000486509 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.3
CDC7-204ENST00000486509 DDX3YO15523 660 aaKnown RBP6.9□□□□□ -1.3
CDC7-204ENST00000486509 ADAM11O75078 769 aa6.9□□□□□ -1.3
CDC7-204ENST00000486509 CD68P34810 354 aaPredicted RBP6.9□□□□□ -1.3
CDC7-204ENST00000486509 CABP4P57796 275 aa6.9□□□□□ -1.3
CDC7-204ENST00000486509 NRG1Q02297 640 aaPredicted RBP6.9□□□□□ -1.3
CDC7-204ENST00000486509 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
CDC7-204ENST00000486509 EHD4Q9H223 541 aa6.9□□□□□ -1.3
CDC7-204ENST00000486509 FAM177BA6PVY3 158 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 WISP1O95388 367 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 NOS3P29474 1203 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 PIP4K2BP78356 416 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 GRM2Q14416 872 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 FAM117BQ6P1L5 589 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 TXNRD3Q86VQ6 643 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 KLHL23Q8NBE8 558 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 GLIS3Q8NEA6 775 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 WFDC12Q8WWY7 111 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 FOXD4L4Q8WXT5 416 aaPredicted RBP6.89□□□□□ -1.31
CDC7-204ENST00000486509 WNT8BQ93098 351 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
CDC7-204ENST00000486509 OSGEPQ9NPF4 335 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 SEC31BQ9NQW1 1179 aa6.89□□□□□ -1.31
CDC7-204ENST00000486509 F8W735 103 aaPredicted RBP6.88□□□□□ -1.31
CDC7-204ENST00000486509 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
CDC7-204ENST00000486509 ALX3O95076 343 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 ESRRAP11474 423 aaPredicted RBP6.88□□□□□ -1.31
CDC7-204ENST00000486509 MAPK8P45983 427 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 IKBKEQ14164 716 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 DOC2BQ14184 412 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 PRPF40BQ6NWY9 871 aaKnown RBP6.88□□□□□ -1.31
CDC7-204ENST00000486509 TMEM130Q8N3G9 435 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 SLC7A3Q8WY07 619 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 GZF1Q9H116 711 aaPredicted RBP6.88□□□□□ -1.31
CDC7-204ENST00000486509 ABCB6Q9NP58 842 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 WWC3Q9ULE0 1092 aa6.88□□□□□ -1.31
CDC7-204ENST00000486509 P4HBP07237 508 aaKnown RBP6.87□□□□□ -1.31
CDC7-204ENST00000486509 ITPKAP23677 461 aa6.87□□□□□ -1.31
CDC7-204ENST00000486509 IREB2P48200 963 aaKnown RBP6.87□□□□□ -1.31
CDC7-204ENST00000486509 ZNF423Q2M1K9 1284 aa6.87□□□□□ -1.31
CDC7-204ENST00000486509 DNAJC14Q6Y2X3 702 aaPredicted RBP6.87□□□□□ -1.31
CDC7-204ENST00000486509 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.87□□□□□ -1.31
CDC7-204ENST00000486509 AGGF1Q8N302 714 aaeCLIP6.87□□□□□ -1.31
CDC7-204ENST00000486509 DCAF11Q8TEB1 546 aa6.87□□□□□ -1.31
CDC7-204ENST00000486509 SSBP4Q9BWG4 385 aaPredicted RBP6.87□□□□□ -1.31
CDC7-204ENST00000486509 CADPSQ9ULU8 1353 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 ANKRD33BA6NCL7 494 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 PCDH1Q08174 1060 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 C19orf57Q0VDD7 668 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDC7-204ENST00000486509 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 UBASH3BQ8TF42 649 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 CLEC4MQ9H2X3 399 aaPredicted RBP6.86□□□□□ -1.31
CDC7-204ENST00000486509 ZNF576Q9H609 170 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 AKTIPQ9H8T0 292 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 RIMBP3CA6NJZ7 1639 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 RIMBP3BA6NNM3 1639 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 RIMBP3Q9UFD9 1639 aa6.86□□□□□ -1.31
CDC7-204ENST00000486509 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
CDC7-204ENST00000486509 FURINP09958 794 aa6.85□□□□□ -1.31
CDC7-204ENST00000486509 NLRP12P59046 1061 aa6.85□□□□□ -1.31
CDC7-204ENST00000486509 Q6ZS46 218 aa6.85□□□□□ -1.31
CDC7-204ENST00000486509 MEGF10Q96KG7 1140 aa6.85□□□□□ -1.31
CDC7-204ENST00000486509 BCO2Q9BYV7 579 aa6.85□□□□□ -1.31
CDC7-204ENST00000486509 SOX17Q9H6I2 414 aaPredicted RBP6.85□□□□□ -1.31
CDC7-204ENST00000486509 NLRP2Q9NX02 1062 aa6.85□□□□□ -1.31
CDC7-204ENST00000486509 PTPN12Q05209 780 aaKnown RBP6.84□□□□□ -1.31
CDC7-204ENST00000486509 DUOXA2Q1HG44 320 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms