RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 REM2Q8IYK8 340 aaPredicted RBP28.28■■■□□ 2.12
SREBF1-214ENST00000486311 MTMR14Q8NCE2 650 aa28.28■■■□□ 2.12
SREBF1-214ENST00000486311 NF2P35240 595 aa28.27■■■□□ 2.12
SREBF1-214ENST00000486311 UBE4AQ14139 1066 aa28.27■■■□□ 2.12
SREBF1-214ENST00000486311 DLGAP5Q15398 846 aa28.27■■■□□ 2.12
SREBF1-214ENST00000486311 RABL6Q3YEC7 729 aaPredicted RBP28.27■■■□□ 2.12
SREBF1-214ENST00000486311 RNF186Q9NXI6 227 aa28.27■■■□□ 2.12
SREBF1-214ENST00000486311 PUS3Q9BZE2 481 aaKnown RBP28.26■■■□□ 2.11
SREBF1-214ENST00000486311 BICC1Q9H694 974 aaKnown RBP28.26■■■□□ 2.11
SREBF1-214ENST00000486311 TTLL12Q14166 644 aaPredicted RBP28.25■■■□□ 2.11
SREBF1-214ENST00000486311 RIPOR2Q9Y4F9 1068 aa28.25■■■□□ 2.11
SREBF1-214ENST00000486311 A0A1B0GUL6 1792 aa28.24■■■□□ 2.11
SREBF1-214ENST00000486311 TRPA1O75762 1119 aa28.24■■■□□ 2.11
SREBF1-214ENST00000486311 ANKRD44Q8N8A2 993 aa28.24■■■□□ 2.11
SREBF1-214ENST00000486311 MCOLN1Q9GZU1 580 aa28.24■■■□□ 2.11
SREBF1-214ENST00000486311 FAM205AQ6ZU69 1335 aa28.23■■■□□ 2.11
SREBF1-214ENST00000486311 MROH5Q6ZUA9 1318 aa28.23■■■□□ 2.11
SREBF1-214ENST00000486311 F8W031 263 aaPredicted RBP28.23■■■□□ 2.11
SREBF1-214ENST00000486311 TDRD7Q8NHU6 1098 aaKnown RBP28.23■■■□□ 2.11
SREBF1-214ENST00000486311 JAG2Q9Y219 1238 aa28.23■■■□□ 2.11
SREBF1-214ENST00000486311 COL1A1P02452 1464 aaPredicted RBP28.22■■■□□ 2.11
SREBF1-214ENST00000486311 CCDC85CA6NKD9 419 aa28.22■■■□□ 2.11
SREBF1-214ENST00000486311 HIBADHP31937 336 aaKnown RBP28.22■■■□□ 2.11
SREBF1-214ENST00000486311 ALDH1L2Q3SY69 923 aa28.22■■■□□ 2.11
SREBF1-214ENST00000486311 CFAP100Q494V2 611 aa28.22■■■□□ 2.11
SREBF1-214ENST00000486311 FAM84BQ96KN1 310 aaPredicted RBP28.22■■■□□ 2.11
SREBF1-214ENST00000486311 DEFB129Q9H1M3 183 aa28.22■■■□□ 2.11
SREBF1-214ENST00000486311 PCDHAC2Q9Y5I4 1007 aa28.22■■■□□ 2.11
SREBF1-214ENST00000486311 SPDYE2BA6NHP3 402 aa28.21■■■□□ 2.11
SREBF1-214ENST00000486311 SPDYE6P0CI01 402 aa28.21■■■□□ 2.11
SREBF1-214ENST00000486311 GYG1P46976 350 aa28.21■■■□□ 2.11
SREBF1-214ENST00000486311 ARMC9Q7Z3E5 817 aa28.21■■■□□ 2.11
SREBF1-214ENST00000486311 CDCA7LQ96GN5 454 aa28.21■■■□□ 2.11
SREBF1-214ENST00000486311 USP44Q9H0E7 712 aa28.21■■■□□ 2.11
SREBF1-214ENST00000486311 TRMT2AQ8IZ69 625 aaKnown RBP28.2■■■□□ 2.1
SREBF1-214ENST00000486311 MYO1BO43795 1136 aa28.19■■■□□ 2.1
SREBF1-214ENST00000486311 DGKZQ13574 1117 aa28.19■■■□□ 2.1
SREBF1-214ENST00000486311 PRMT6Q96LA8 375 aaPredicted RBP28.19■■■□□ 2.1
SREBF1-214ENST00000486311 PPP2R3BQ9Y5P8 575 aa28.19■■■□□ 2.1
SREBF1-214ENST00000486311 PTPN12Q05209 780 aaKnown RBP28.18■■■□□ 2.1
SREBF1-214ENST00000486311 LRRC24Q50LG9 513 aa28.18■■■□□ 2.1
SREBF1-214ENST00000486311 MFSD14BQ5SR56 506 aa28.18■■■□□ 2.1
SREBF1-214ENST00000486311 LDLRAD1Q5T700 205 aa28.18■■■□□ 2.1
SREBF1-214ENST00000486311 AKAP11Q9UKA4 1901 aa28.18■■■□□ 2.1
SREBF1-214ENST00000486311 PRKG1Q13976 671 aa28.17■■■□□ 2.1
SREBF1-214ENST00000486311 CLRN2A0PK11 232 aa28.16■■■□□ 2.1
SREBF1-214ENST00000486311 METTL24Q5JXM2 366 aa28.16■■■□□ 2.1
SREBF1-214ENST00000486311 FBXO33Q7Z6M2 555 aa28.16■■■□□ 2.1
SREBF1-214ENST00000486311 SMC4Q9NTJ3 1288 aa28.16■■■□□ 2.1
SREBF1-214ENST00000486311 ANGEL1Q9UNK9 670 aaKnown RBP28.16■■■□□ 2.1
SREBF1-214ENST00000486311 AOX1Q06278 1338 aa28.16■■■□□ 2.1
SREBF1-214ENST00000486311 VGLL2Q8N8G2 317 aa28.15■■■□□ 2.1
SREBF1-214ENST00000486311 PDE8BO95263 885 aa28.14■■■□□ 2.1
SREBF1-214ENST00000486311 CT47B1P0C2W7 299 aaPredicted RBP28.14■■■□□ 2.1
SREBF1-214ENST00000486311 TM4SF4P48230 202 aa28.14■■■□□ 2.1
SREBF1-214ENST00000486311 RGS19P49795 217 aa28.14■■■□□ 2.1
SREBF1-214ENST00000486311 RBM5P52756 815 aaKnown RBP eCLIP28.14■■■□□ 2.12e-7■■■□□ 15
SREBF1-214ENST00000486311 MAP3K11Q16584 847 aa28.14■■■□□ 2.1
SREBF1-214ENST00000486311 KLHDC4Q8TBB5 520 aa28.14■■■□□ 2.1
SREBF1-214ENST00000486311 VEZTQ9HBM0 779 aa28.14■■■□□ 2.1
SREBF1-214ENST00000486311 SERPINA10Q9UK55 444 aa28.14■■■□□ 2.1
SREBF1-214ENST00000486311 TTF2Q9UNY4 1162 aaKnown RBP28.14■■■□□ 2.1
SREBF1-214ENST00000486311 CCER2I3L3R5 266 aa28.13■■■□□ 2.09
SREBF1-214ENST00000486311 VPS37DQ86XT2 251 aa28.13■■■□□ 2.09
SREBF1-214ENST00000486311 SSC5DA1L4H1 1573 aa28.12■■■□□ 2.09
SREBF1-214ENST00000486311 PPP1R12BO60237 982 aaPredicted RBP28.12■■■□□ 2.09
SREBF1-214ENST00000486311 MKRN3Q13064 507 aaKnown RBP28.12■■■□□ 2.09
SREBF1-214ENST00000486311 SUPT20HL1Q3ZLR7 823 aa28.12■■■□□ 2.09
SREBF1-214ENST00000486311 FZD1Q9UP38 647 aa28.12■■■□□ 2.09
SREBF1-214ENST00000486311 CAVIN4Q5BKX8 364 aa28.11■■■□□ 2.09
SREBF1-214ENST00000486311 RFX5P48382 616 aaPredicted RBP28.1■■■□□ 2.09
SREBF1-214ENST00000486311 SREBF2Q12772 1141 aa28.1■■■□□ 2.09
SREBF1-214ENST00000486311 RASA3Q14644 834 aa28.1■■■□□ 2.09
SREBF1-214ENST00000486311 SPDYE2Q495Y8 402 aa28.1■■■□□ 2.09
SREBF1-214ENST00000486311 SPRYD7Q5W111 196 aa28.1■■■□□ 2.09
SREBF1-214ENST00000486311 UNCXA6NJT0 531 aa28.09■■■□□ 2.09
SREBF1-214ENST00000486311 MLLT1Q03111 559 aaPredicted RBP28.09■■■□□ 2.09
SREBF1-214ENST00000486311 NBPF12Q5TAG4 269 aaPredicted RBP28.09■■■□□ 2.09
SREBF1-214ENST00000486311 ZNF70Q9UC06 446 aaPredicted RBP28.09■■■□□ 2.09
SREBF1-214ENST00000486311 IQSEC3Q9UPP2 1182 aaPredicted RBP28.09■■■□□ 2.09
SREBF1-214ENST00000486311 TNFAIP1Q13829 316 aa28.08■■■□□ 2.09
SREBF1-214ENST00000486311 DZIP1LQ8IYY4 767 aaKnown RBP28.08■■■□□ 2.09
SREBF1-214ENST00000486311 TBC1D22AQ8WUA7 517 aa28.08■■■□□ 2.09
SREBF1-214ENST00000486311 SLC10A4Q96EP9 437 aa28.08■■■□□ 2.09
SREBF1-214ENST00000486311 KIF16BQ96L93 1317 aa28.08■■■□□ 2.09
SREBF1-214ENST00000486311 EYA2O00167 538 aa28.07■■■□□ 2.08
SREBF1-214ENST00000486311 TBC1D8O95759 1140 aa28.07■■■□□ 2.08
SREBF1-214ENST00000486311 FGFR2P21802 821 aa28.07■■■□□ 2.08
SREBF1-214ENST00000486311 CRKP46108 304 aa28.07■■■□□ 2.08
SREBF1-214ENST00000486311 CHAF1AQ13111 956 aaPredicted RBP28.07■■■□□ 2.08
SREBF1-214ENST00000486311 PUM3Q15397 648 aaKnown RBP28.07■■■□□ 2.08
SREBF1-214ENST00000486311 CTU1Q7Z7A3 348 aaKnown RBP28.07■■■□□ 2.08
SREBF1-214ENST00000486311 TDRD3Q9H7E2 651 aaKnown RBP28.07■■■□□ 2.08
SREBF1-214ENST00000486311 NOB1Q9ULX3 412 aaKnown RBP28.07■■■□□ 2.08
SREBF1-214ENST00000486311 FRAT2O75474 233 aaPredicted RBP28.06■■■□□ 2.08
SREBF1-214ENST00000486311 BCAMP50895 628 aa28.06■■■□□ 2.08
SREBF1-214ENST00000486311 GRIK5Q16478 980 aa28.06■■■□□ 2.08
SREBF1-214ENST00000486311 IFIT1P09914 478 aaKnown RBP28.05■■■□□ 2.08
SREBF1-214ENST00000486311 UBTFL1P0CB47 393 aaPredicted RBP28.05■■■□□ 2.08
SREBF1-214ENST00000486311 HDLBPQ00341 1268 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms