RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 JAG2Q9Y219 1238 aa11.87□□□□□ -0.51
TMEM39A-208ENST00000486159 AOX1Q06278 1338 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 WNT10BO00744 389 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 TRPA1O75762 1119 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 SLC10A3P09131 477 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 NOGQ13253 232 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 TTLL5Q6EMB2 1281 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 KIAA0825Q8IV33 1275 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 CERS5Q8N5B7 392 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 RNF186Q9NXI6 227 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 LEMD3Q9Y2U8 911 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 A0A1B0GUL6 1792 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 ZNF609O15014 1411 aa11.86□□□□□ -0.51
TMEM39A-208ENST00000486159 PLIN1O60240 522 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 PRKG1Q13976 671 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 LMBR1LQ6UX01 489 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 RASAL3Q86YV0 1011 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 MPHOSPH8Q99549 860 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 COA1Q9GZY4 146 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 MYH16Q9H6N6 1097 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 CD209Q9NNX6 404 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 CHMP3Q9Y3E7 222 aa11.85□□□□□ -0.51
TMEM39A-208ENST00000486159 ANKRD18BA2A2Z9 1011 aa11.84□□□□□ -0.51
TMEM39A-208ENST00000486159 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
TMEM39A-208ENST00000486159 CT47B1P0C2W7 299 aaPredicted RBP11.84□□□□□ -0.51
TMEM39A-208ENST00000486159 DGKZQ13574 1117 aa11.84□□□□□ -0.51
TMEM39A-208ENST00000486159 STRIP1Q5VSL9 837 aa11.84□□□□□ -0.51
TMEM39A-208ENST00000486159 KAZALD1Q96I82 304 aa11.84□□□□□ -0.51
TMEM39A-208ENST00000486159 PUS3Q9BZE2 481 aaKnown RBP11.84□□□□□ -0.51
TMEM39A-208ENST00000486159 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
TMEM39A-208ENST00000486159 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
TMEM39A-208ENST00000486159 SLC4A10Q6U841 1118 aa11.83□□□□□ -0.52
TMEM39A-208ENST00000486159 CCDC102AQ96A19 550 aa11.83□□□□□ -0.52
TMEM39A-208ENST00000486159 SUCLG2Q96I99 432 aa11.83□□□□□ -0.52
TMEM39A-208ENST00000486159 ZBED3Q96IU2 234 aaPredicted RBP11.83□□□□□ -0.52
TMEM39A-208ENST00000486159 TNRC18O15417 2968 aaPredicted RBP11.82□□□□□ -0.52
TMEM39A-208ENST00000486159 PITPNM1O00562 1244 aa11.82□□□□□ -0.52
TMEM39A-208ENST00000486159 KCNJ4P48050 445 aa11.82□□□□□ -0.52
TMEM39A-208ENST00000486159 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
TMEM39A-208ENST00000486159 ANKRD2Q9GZV1 360 aa11.82□□□□□ -0.52
TMEM39A-208ENST00000486159 PITPNM2Q9BZ72 1349 aa11.82□□□□□ -0.52
TMEM39A-208ENST00000486159 PAPPA2Q9BXP8 1791 aa11.82□□□□□ -0.52
TMEM39A-208ENST00000486159 AKAP11Q9UKA4 1901 aa11.82□□□□□ -0.52
TMEM39A-208ENST00000486159 GRM8O00222 908 aa11.81□□□□□ -0.52
TMEM39A-208ENST00000486159 CA12O43570 354 aa11.81□□□□□ -0.52
TMEM39A-208ENST00000486159 NBPF7P0C2Y1 421 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-208ENST00000486159 IRX6P78412 446 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-208ENST00000486159 PTPN12Q05209 780 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-208ENST00000486159 TTLL12Q14166 644 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-208ENST00000486159 R3HDMLQ9H3Y0 253 aa11.81□□□□□ -0.52
TMEM39A-208ENST00000486159 CLRN2A0PK11 232 aa11.8□□□□□ -0.52
TMEM39A-208ENST00000486159 TBC1D8O95759 1140 aa11.8□□□□□ -0.52
TMEM39A-208ENST00000486159 GRIK5Q16478 980 aa11.8□□□□□ -0.52
TMEM39A-208ENST00000486159 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
TMEM39A-208ENST00000486159 PRMT6Q96LA8 375 aaPredicted RBP11.8□□□□□ -0.52
TMEM39A-208ENST00000486159 GYG1P46976 350 aa11.79□□□□□ -0.52
TMEM39A-208ENST00000486159 LDHAL6AQ6ZMR3 332 aa11.79□□□□□ -0.52
TMEM39A-208ENST00000486159 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
TMEM39A-208ENST00000486159 KLHDC4Q8TBB5 520 aa11.79□□□□□ -0.52
TMEM39A-208ENST00000486159 C9orf78Q9NZ63 289 aaPredicted RBP11.79□□□□□ -0.52
TMEM39A-208ENST00000486159 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
TMEM39A-208ENST00000486159 DLL1O00548 723 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 IL1R1P14778 569 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 CCDC57Q2TAC2 916 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 CFAP100Q494V2 611 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 LRRC24Q50LG9 513 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 C15orf52Q6ZUT6 534 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 CLMNQ96JQ2 1002 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 SRCIN1Q9C0H9 1055 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 CNNM1Q9NRU3 951 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 SAGE1Q9NXZ1 904 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 ANGEL1Q9UNK9 670 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 IQSEC3Q9UPP2 1182 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 SSC5DA1L4H1 1573 aa11.78□□□□□ -0.52
TMEM39A-208ENST00000486159 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 SOX10P56693 466 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 FKBP1BP68106 108 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 AAMPQ13685 434 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 DLGAP5Q15398 846 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 NBPF12Q5TAG4 269 aaPredicted RBP11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 BICC1Q9H694 974 aaKnown RBP11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 HDAC9Q9UKV0 1011 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 RIPOR2Q9Y4F9 1068 aa11.77□□□□□ -0.53
TMEM39A-208ENST00000486159 ALDH1L1O75891 902 aa11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 PDE3AQ14432 1141 aa11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 LDLRAD1Q5T700 205 aa11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 TDRD7Q8NHU6 1098 aaKnown RBP11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 SSH1Q8WYL5 1049 aa11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 FAM84BQ96KN1 310 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 VEZTQ9HBM0 779 aa11.76□□□□□ -0.53
TMEM39A-208ENST00000486159 ECM29Q5VYK3 1845 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms