RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 CCDC57Q2TAC2 916 aa26.38■■□□□ 1.81
LMBR1-217ENST00000485985 SOX10P56693 466 aa26.37■■□□□ 1.81
LMBR1-217ENST00000485985 C15orf52Q6ZUT6 534 aaKnown RBP26.37■■□□□ 1.81
LMBR1-217ENST00000485985 CD209Q9NNX6 404 aa26.37■■□□□ 1.81
LMBR1-217ENST00000485985 PTPRCP08575 1304 aa26.37■■□□□ 1.81
LMBR1-217ENST00000485985 GTF2IP78347 998 aa26.36■■□□□ 1.81
LMBR1-217ENST00000485985 KIAA0825Q8IV33 1275 aa26.36■■□□□ 1.81
LMBR1-217ENST00000485985 TBC1D8O95759 1140 aa26.35■■□□□ 1.81
LMBR1-217ENST00000485985 TM4SF4P48230 202 aa26.35■■□□□ 1.81
LMBR1-217ENST00000485985 TAF7LQ5H9L4 462 aa26.35■■□□□ 1.81
LMBR1-217ENST00000485985 PDE4DIPQ5VU43 2346 aa26.35■■□□□ 1.81
LMBR1-217ENST00000485985 LDHAL6AQ6ZMR3 332 aa26.35■■□□□ 1.81
LMBR1-217ENST00000485985 HDAC9Q9UKV0 1011 aa26.35■■□□□ 1.81
LMBR1-217ENST00000485985 BICC1Q9H694 974 aaKnown RBP26.34■■□□□ 1.81
LMBR1-217ENST00000485985 TNRC18O15417 2968 aaPredicted RBP26.33■■□□□ 1.81
LMBR1-217ENST00000485985 APOBEC3FQ8IUX4 373 aaKnown RBP26.33■■□□□ 1.81
LMBR1-217ENST00000485985 TRMT2AQ8IZ69 625 aaKnown RBP26.33■■□□□ 1.81
LMBR1-217ENST00000485985 CERS5Q8N5B7 392 aa26.33■■□□□ 1.81
LMBR1-217ENST00000485985 ZNF296Q8WUU4 475 aaPredicted RBP26.33■■□□□ 1.81
LMBR1-217ENST00000485985 ZBED3Q96IU2 234 aaPredicted RBP26.33■■□□□ 1.81
LMBR1-217ENST00000485985 PUS3Q9BZE2 481 aaKnown RBP26.33■■□□□ 1.81
LMBR1-217ENST00000485985 CNNM1Q9NRU3 951 aa26.33■■□□□ 1.81
LMBR1-217ENST00000485985 CCER2I3L3R5 266 aa26.32■■□□□ 1.8
LMBR1-217ENST00000485985 PTPN12Q05209 780 aaKnown RBP26.32■■□□□ 1.8
LMBR1-217ENST00000485985 RABL6Q3YEC7 729 aaPredicted RBP26.32■■□□□ 1.8
LMBR1-217ENST00000485985 ARMC9Q7Z3E5 817 aa26.32■■□□□ 1.8
LMBR1-217ENST00000485985 ANKRD44Q8N8A2 993 aa26.32■■□□□ 1.8
LMBR1-217ENST00000485985 PLIN1O60240 522 aa26.31■■□□□ 1.8
LMBR1-217ENST00000485985 MKRN3Q13064 507 aaKnown RBP26.31■■□□□ 1.8
LMBR1-217ENST00000485985 PRKG1Q13976 671 aa26.31■■□□□ 1.8
LMBR1-217ENST00000485985 PKN2Q16513 984 aaKnown RBP26.31■■□□□ 1.8
LMBR1-217ENST00000485985 ZNF804AQ7Z570 1209 aa26.31■■□□□ 1.8
LMBR1-217ENST00000485985 HPS5Q9UPZ3 1129 aa26.31■■□□□ 1.8
LMBR1-217ENST00000485985 IL1R1P14778 569 aa26.3■■□□□ 1.8
LMBR1-217ENST00000485985 MYH13Q9UKX3 1938 aa26.29■■□□□ 1.8
LMBR1-217ENST00000485985 ALDH1L2Q3SY69 923 aa26.29■■□□□ 1.8
LMBR1-217ENST00000485985 NOM1Q5C9Z4 860 aaKnown RBP26.29■■□□□ 1.8
LMBR1-217ENST00000485985 LDLRAD1Q5T700 205 aa26.29■■□□□ 1.8
LMBR1-217ENST00000485985 GPR25O00155 361 aa26.28■■□□□ 1.8
LMBR1-217ENST00000485985 SREBF2Q12772 1141 aa26.28■■□□□ 1.8
LMBR1-217ENST00000485985 SMC4Q9NTJ3 1288 aa26.28■■□□□ 1.8
LMBR1-217ENST00000485985 JAG2Q9Y219 1238 aa26.28■■□□□ 1.8
LMBR1-217ENST00000485985 DLGAP5Q15398 846 aa26.27■■□□□ 1.8
LMBR1-217ENST00000485985 USP44Q9H0E7 712 aa26.27■■□□□ 1.8
LMBR1-217ENST00000485985 DEFB129Q9H1M3 183 aa26.27■■□□□ 1.8
LMBR1-217ENST00000485985 ANGEL1Q9UNK9 670 aaKnown RBP26.27■■□□□ 1.8
LMBR1-217ENST00000485985 SPRYD7Q5W111 196 aa26.26■■□□□ 1.79
LMBR1-217ENST00000485985 MTMR14Q8NCE2 650 aa26.26■■□□□ 1.79
LMBR1-217ENST00000485985 CFHR5Q9BXR6 569 aa26.26■■□□□ 1.79
LMBR1-217ENST00000485985 RIPOR2Q9Y4F9 1068 aa26.26■■□□□ 1.79
LMBR1-217ENST00000485985 COL1A1P02452 1464 aaPredicted RBP26.25■■□□□ 1.79
LMBR1-217ENST00000485985 FZD1Q9UP38 647 aa26.25■■□□□ 1.79
LMBR1-217ENST00000485985 PCDHAC2Q9Y5I4 1007 aa26.25■■□□□ 1.79
LMBR1-217ENST00000485985 GYG1P46976 350 aa26.24■■□□□ 1.79
LMBR1-217ENST00000485985 UBE4AQ14139 1066 aa26.24■■□□□ 1.79
LMBR1-217ENST00000485985 LRRC24Q50LG9 513 aa26.24■■□□□ 1.79
LMBR1-217ENST00000485985 F8W031 263 aaPredicted RBP26.23■■□□□ 1.79
LMBR1-217ENST00000485985 FKBP1AP62942 108 aaKnown RBP26.23■■□□□ 1.79
LMBR1-217ENST00000485985 KLHDC4Q8TBB5 520 aa26.23■■□□□ 1.79
LMBR1-217ENST00000485985 R3HDMLQ9H3Y0 253 aa26.23■■□□□ 1.79
LMBR1-217ENST00000485985 MROH5Q6ZUA9 1318 aa26.22■■□□□ 1.79
LMBR1-217ENST00000485985 FKTNO75072 461 aa26.22■■□□□ 1.79
LMBR1-217ENST00000485985 MAP3K11Q16584 847 aa26.22■■□□□ 1.79
LMBR1-217ENST00000485985 SLC10A4Q96EP9 437 aa26.22■■□□□ 1.79
LMBR1-217ENST00000485985 PPP2R3BQ9Y5P8 575 aa26.22■■□□□ 1.79
LMBR1-217ENST00000485985 AOX1Q06278 1338 aa26.21■■□□□ 1.79
LMBR1-217ENST00000485985 FAM205AQ6ZU69 1335 aa26.21■■□□□ 1.79
LMBR1-217ENST00000485985 LAMB1P07942 1786 aa26.21■■□□□ 1.79
LMBR1-217ENST00000485985 CFAP100Q494V2 611 aa26.21■■□□□ 1.79
LMBR1-217ENST00000485985 FBXO46Q6PJ61 603 aaPredicted RBP26.21■■□□□ 1.79
LMBR1-217ENST00000485985 VGLL2Q8N8G2 317 aa26.21■■□□□ 1.79
LMBR1-217ENST00000485985 TDRD7Q8NHU6 1098 aaKnown RBP26.21■■□□□ 1.79
LMBR1-217ENST00000485985 FAM84BQ96KN1 310 aaPredicted RBP26.21■■□□□ 1.79
LMBR1-217ENST00000485985 SSC5DA1L4H1 1573 aa26.2■■□□□ 1.79
LMBR1-217ENST00000485985 OTOFQ9HC10 1997 aa26.2■■□□□ 1.79
LMBR1-217ENST00000485985 MYO1BO43795 1136 aa26.2■■□□□ 1.78
LMBR1-217ENST00000485985 ALDH1A1P00352 501 aa26.2■■□□□ 1.78
LMBR1-217ENST00000485985 CT47B1P0C2W7 299 aaPredicted RBP26.2■■□□□ 1.78
LMBR1-217ENST00000485985 INHBEP58166 350 aa26.2■■□□□ 1.78
LMBR1-217ENST00000485985 PRMT6Q96LA8 375 aaPredicted RBP26.2■■□□□ 1.78
LMBR1-217ENST00000485985 SPDYE2BA6NHP3 402 aa26.19■■□□□ 1.78
LMBR1-217ENST00000485985 MANSC4A6NHS7 340 aaPredicted RBP26.19■■□□□ 1.78
LMBR1-217ENST00000485985 PPP1R12BO60237 982 aaPredicted RBP26.19■■□□□ 1.78
LMBR1-217ENST00000485985 SPDYE6P0CI01 402 aa26.19■■□□□ 1.78
LMBR1-217ENST00000485985 HIBADHP31937 336 aaKnown RBP26.19■■□□□ 1.78
LMBR1-217ENST00000485985 CLRN2A0PK11 232 aa26.18■■□□□ 1.78
LMBR1-217ENST00000485985 ZBTB48P10074 688 aaPredicted RBP26.18■■□□□ 1.78
LMBR1-217ENST00000485985 SUPT20HL1Q3ZLR7 823 aa26.18■■□□□ 1.78
LMBR1-217ENST00000485985 METTL24Q5JXM2 366 aa26.18■■□□□ 1.78
LMBR1-217ENST00000485985 CLMNQ96JQ2 1002 aa26.18■■□□□ 1.78
LMBR1-217ENST00000485985 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.18■■□□□ 1.78
LMBR1-217ENST00000485985 NOB1Q9ULX3 412 aaKnown RBP26.18■■□□□ 1.78
LMBR1-217ENST00000485985 UNCXA6NJT0 531 aa26.17■■□□□ 1.78
LMBR1-217ENST00000485985 RFX5P48382 616 aaPredicted RBP26.17■■□□□ 1.78
LMBR1-217ENST00000485985 MFSD14BQ5SR56 506 aa26.17■■□□□ 1.78
LMBR1-217ENST00000485985 IFNL1Q8IU54 200 aa26.17■■□□□ 1.78
LMBR1-217ENST00000485985 PDE8BO95263 885 aa26.16■■□□□ 1.78
LMBR1-217ENST00000485985 WNK4Q96J92 1243 aa26.16■■□□□ 1.78
LMBR1-217ENST00000485985 IQSEC3Q9UPP2 1182 aaPredicted RBP26.16■■□□□ 1.78
LMBR1-217ENST00000485985 NBPF12Q5TAG4 269 aaPredicted RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms