RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 SULF1Q8IWU6 871 aa22.94■■□□□ 1.26
COL1A1-206ENST00000485870 IQSEC3Q9UPP2 1182 aaPredicted RBP22.94■■□□□ 1.26
COL1A1-206ENST00000485870 RASSF10A6NK89 507 aa22.93■■□□□ 1.26
COL1A1-206ENST00000485870 F8W031 263 aaPredicted RBP22.93■■□□□ 1.26
COL1A1-206ENST00000485870 SASH1O94885 1247 aa22.93■■□□□ 1.26
COL1A1-206ENST00000485870 IFIT1P09914 478 aaKnown RBP22.93■■□□□ 1.26
COL1A1-206ENST00000485870 FGFR2P21802 821 aa22.93■■□□□ 1.26
COL1A1-206ENST00000485870 DEFB115Q30KQ5 88 aa22.93■■□□□ 1.26
COL1A1-206ENST00000485870 NBPF9Q3BBW0 867 aa22.93■■□□□ 1.26
COL1A1-206ENST00000485870 FBXO33Q7Z6M2 555 aa22.93■■□□□ 1.26
COL1A1-206ENST00000485870 ITPRIPQ8IWB1 547 aa22.93■■□□□ 1.26
COL1A1-206ENST00000485870 FBXO3Q9UK99 471 aa22.93■■□□□ 1.26
COL1A1-206ENST00000485870 FAM205AQ6ZU69 1335 aa22.92■■□□□ 1.26
COL1A1-206ENST00000485870 VEGFBP49765 207 aa22.92■■□□□ 1.26
COL1A1-206ENST00000485870 BCAMP50895 628 aa22.92■■□□□ 1.26
COL1A1-206ENST00000485870 COPRSQ9NQ92 184 aa22.92■■□□□ 1.26
COL1A1-206ENST00000485870 CEP126Q9P2H0 1117 aa22.92■■□□□ 1.26
COL1A1-206ENST00000485870 WNT10BO00744 389 aa22.91■■□□□ 1.26
COL1A1-206ENST00000485870 FRAT2O75474 233 aaPredicted RBP22.91■■□□□ 1.26
COL1A1-206ENST00000485870 SLC5A1P13866 664 aa22.91■■□□□ 1.26
COL1A1-206ENST00000485870 IL15P40933 162 aaPredicted RBP22.91■■□□□ 1.26
COL1A1-206ENST00000485870 MMP14P50281 582 aa22.91■■□□□ 1.26
COL1A1-206ENST00000485870 FKBP1AP62942 108 aaKnown RBP22.91■■□□□ 1.26
COL1A1-206ENST00000485870 MTX1Q13505 466 aa22.91■■□□□ 1.26
COL1A1-206ENST00000485870 PAXIP1Q6ZW49 1069 aaPredicted RBP22.91■■□□□ 1.26
COL1A1-206ENST00000485870 LPIN2Q92539 896 aa22.91■■□□□ 1.26
COL1A1-206ENST00000485870 SCAF8Q9UPN6 1271 aaKnown RBP22.91■■□□□ 1.26
COL1A1-206ENST00000485870 TLL2Q9Y6L7 1015 aa22.91■■□□□ 1.26
COL1A1-206ENST00000485870 CHAF1AQ13111 956 aaPredicted RBP22.9■■□□□ 1.26
COL1A1-206ENST00000485870 MFSD14BQ5SR56 506 aa22.9■■□□□ 1.26
COL1A1-206ENST00000485870 PITPNM2Q9BZ72 1349 aa22.89■■□□□ 1.26
COL1A1-206ENST00000485870 ATP2B3Q16720 1220 aa22.89■■□□□ 1.25
COL1A1-206ENST00000485870 PNMA6EA0A0J9YXQ4 647 aa22.88■■□□□ 1.25
COL1A1-206ENST00000485870 GRM1Q13255 1194 aa22.88■■□□□ 1.25
COL1A1-206ENST00000485870 DLGAP5Q15398 846 aa22.88■■□□□ 1.25
COL1A1-206ENST00000485870 SAPCD2Q86UD0 394 aa22.88■■□□□ 1.25
COL1A1-206ENST00000485870 PANK1Q8TE04 598 aa22.88■■□□□ 1.25
COL1A1-206ENST00000485870 CDCA5Q96FF9 252 aa22.88■■□□□ 1.25
COL1A1-206ENST00000485870 C1orf115Q9H7X2 142 aa22.88■■□□□ 1.25
COL1A1-206ENST00000485870 PCDHAC2Q9Y5I4 1007 aa22.87■■□□□ 1.25
COL1A1-206ENST00000485870 ARAP2Q8WZ64 1704 aa22.87■■□□□ 1.25
COL1A1-206ENST00000485870 WDR33Q9C0J8 1336 aaKnown RBP22.86■■□□□ 1.25
COL1A1-206ENST00000485870 CFAP100Q494V2 611 aa22.86■■□□□ 1.25
COL1A1-206ENST00000485870 CYP4F22Q6NT55 531 aa22.86■■□□□ 1.25
COL1A1-206ENST00000485870 ZBED3Q96IU2 234 aaPredicted RBP22.86■■□□□ 1.25
COL1A1-206ENST00000485870 GBA2Q9HCG7 927 aaPredicted RBP22.86■■□□□ 1.25
COL1A1-206ENST00000485870 RCAN3Q9UKA8 241 aa22.86■■□□□ 1.25
COL1A1-206ENST00000485870 HSPA1AP0DMV8 641 aaKnown RBP22.85■■□□□ 1.25
COL1A1-206ENST00000485870 HSPA1BP0DMV9 641 aaKnown RBP22.85■■□□□ 1.25
COL1A1-206ENST00000485870 RBM5P52756 815 aaKnown RBP eCLIP22.85■■□□□ 1.25
COL1A1-206ENST00000485870 CAPNS2Q96L46 248 aa22.85■■□□□ 1.25
COL1A1-206ENST00000485870 TTF2Q9UNY4 1162 aaKnown RBP22.85■■□□□ 1.25
COL1A1-206ENST00000485870 MYH13Q9UKX3 1938 aa22.84■■□□□ 1.25
COL1A1-206ENST00000485870 ZBTB7BO15156 539 aaPredicted RBP22.84■■□□□ 1.25
COL1A1-206ENST00000485870 TFCP2Q12800 502 aa22.84■■□□□ 1.25
COL1A1-206ENST00000485870 C2orf69Q8N8R5 385 aa22.84■■□□□ 1.25
COL1A1-206ENST00000485870 MTMR14Q8NCE2 650 aa22.84■■□□□ 1.25
COL1A1-206ENST00000485870 ECE1P42892 770 aa22.83■■□□□ 1.25
COL1A1-206ENST00000485870 HUNKP57058 714 aa22.83■■□□□ 1.25
COL1A1-206ENST00000485870 GRIK5Q16478 980 aa22.83■■□□□ 1.25
COL1A1-206ENST00000485870 PRAMEF18Q5VWM3 479 aa22.83■■□□□ 1.25
COL1A1-206ENST00000485870 APOBEC3FQ8IUX4 373 aaKnown RBP22.83■■□□□ 1.25
COL1A1-206ENST00000485870 TBC1D22AQ8WUA7 517 aa22.83■■□□□ 1.25
COL1A1-206ENST00000485870 SPDYE2BA6NHP3 402 aa22.82■■□□□ 1.24
COL1A1-206ENST00000485870 SPDYE6P0CI01 402 aa22.82■■□□□ 1.24
COL1A1-206ENST00000485870 MS4A1P11836 297 aa22.82■■□□□ 1.24
COL1A1-206ENST00000485870 ADORA1P30542 326 aa22.82■■□□□ 1.24
COL1A1-206ENST00000485870 ECM29Q5VYK3 1845 aa22.82■■□□□ 1.24
COL1A1-206ENST00000485870 COL1A1P02452 1464 aaPredicted RBP22.81■■□□□ 1.24
COL1A1-206ENST00000485870 CLRN2A0PK11 232 aa22.81■■□□□ 1.24
COL1A1-206ENST00000485870 PHKA1P46020 1223 aa22.81■■□□□ 1.24
COL1A1-206ENST00000485870 ATP8B2P98198 1209 aa22.81■■□□□ 1.24
COL1A1-206ENST00000485870 G3BP1Q13283 466 aaKnown RBP eCLIP22.81■■□□□ 1.24
COL1A1-206ENST00000485870 HHIPL1Q96JK4 782 aa22.81■■□□□ 1.24
COL1A1-206ENST00000485870 PRMT6Q96LA8 375 aaPredicted RBP22.81■■□□□ 1.24
COL1A1-206ENST00000485870 AOX1Q06278 1338 aa22.81■■□□□ 1.24
COL1A1-206ENST00000485870 MYO1BO43795 1136 aa22.8■■□□□ 1.24
COL1A1-206ENST00000485870 TIMM10P62072 90 aa22.8■■□□□ 1.24
COL1A1-206ENST00000485870 POLA2Q14181 598 aa22.8■■□□□ 1.24
COL1A1-206ENST00000485870 GNL3LQ9NVN8 582 aaKnown RBP22.8■■□□□ 1.24
COL1A1-206ENST00000485870 SERPINA10Q9UK55 444 aa22.8■■□□□ 1.24
COL1A1-206ENST00000485870 AKAP2Q9Y2D5 859 aa22.8■■□□□ 1.24
COL1A1-206ENST00000485870 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.8■■□□□ 1.24
COL1A1-206ENST00000485870 A0A1B0GUL7 405 aa22.79■■□□□ 1.24
COL1A1-206ENST00000485870 CRKP46108 304 aa22.79■■□□□ 1.24
COL1A1-206ENST00000485870 SSH3Q8TE77 659 aa22.79■■□□□ 1.24
COL1A1-206ENST00000485870 VEZTQ9HBM0 779 aa22.79■■□□□ 1.24
COL1A1-206ENST00000485870 AOC2O75106 756 aa22.78■■□□□ 1.24
COL1A1-206ENST00000485870 COG6Q9Y2V7 657 aa22.78■■□□□ 1.24
COL1A1-206ENST00000485870 THSD7BQ9C0I4 1608 aa22.78■■□□□ 1.24
COL1A1-206ENST00000485870 PAPPA2Q9BXP8 1791 aa22.77■■□□□ 1.24
COL1A1-206ENST00000485870 OS9Q13438 667 aaPredicted RBP22.77■■□□□ 1.24
COL1A1-206ENST00000485870 MVPQ14764 893 aaKnown RBP22.77■■□□□ 1.24
COL1A1-206ENST00000485870 CCDC102BQ68D86 513 aa22.77■■□□□ 1.24
COL1A1-206ENST00000485870 WDR66Q8TBY9 1149 aa22.77■■□□□ 1.24
COL1A1-206ENST00000485870 XAGE2Q96GT9 111 aa22.77■■□□□ 1.24
COL1A1-206ENST00000485870 NEUROD6Q96NK8 337 aa22.77■■□□□ 1.24
COL1A1-206ENST00000485870 DEFB129Q9H1M3 183 aa22.77■■□□□ 1.24
COL1A1-206ENST00000485870 NF2P35240 595 aa22.76■■□□□ 1.23
COL1A1-206ENST00000485870 TTLL12Q14166 644 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms