RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 ANAPC15P60006 121 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 WASHC4Q2M389 1173 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 MASTLQ96GX5 879 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
CTSA-208ENST00000485627 ANTXR1Q9H6X2 564 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 DENND2AQ9ULE3 1009 aa11.45□□□□□ -0.58
CTSA-208ENST00000485627 TNRC6CQ9HCJ0 1690 aaKnown RBP11.45□□□□□ -0.58
CTSA-208ENST00000485627 CCDC171Q6TFL3 1326 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 PPEF1O14829 653 aaPredicted RBP11.44□□□□□ -0.58
CTSA-208ENST00000485627 ST18O60284 1047 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 IDH1O75874 414 aaKnown RBP11.44□□□□□ -0.58
CTSA-208ENST00000485627 CYP2E1P05181 493 aaPredicted RBP11.44□□□□□ -0.58
CTSA-208ENST00000485627 ATP2B4P23634 1241 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 HIBADHP31937 336 aaKnown RBP11.44□□□□□ -0.58
CTSA-208ENST00000485627 GYG1P46976 350 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 MAP3K12Q12852 859 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 RASGRF1Q13972 1273 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 ZMYM1Q5SVZ6 1142 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 RNF20Q5VTR2 975 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 PI16Q6UXB8 463 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 IL25Q9H293 177 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 GGA1Q9UJY5 639 aa11.44□□□□□ -0.58
CTSA-208ENST00000485627 H0YIN7 160 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 SEMA3EO15041 775 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 SRGNP10124 158 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 ZKSCAN1P17029 563 aaPredicted RBP11.43□□□□□ -0.58
CTSA-208ENST00000485627 HSPA4P34932 840 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 SLC9C2Q5TAH2 1124 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 FBXO33Q7Z6M2 555 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 C2CD5Q86YS7 1000 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 TNS4Q8IZW8 715 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 IL27Q8NEV9 243 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 APPBP2Q92624 585 aa11.43□□□□□ -0.58
CTSA-208ENST00000485627 ZNF622Q969S3 477 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTSA-208ENST00000485627 FAM84BQ96KN1 310 aaPredicted RBP11.43□□□□□ -0.58
CTSA-208ENST00000485627 NSFL1CQ9UNZ2 370 aaKnown RBP11.43□□□□□ -0.58
CTSA-208ENST00000485627 MED23Q9ULK4 1368 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 TOMM70O94826 608 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 UFL1O94874 794 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 GPSM2P81274 684 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 PTH1RQ03431 593 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 ZNF804AQ7Z570 1209 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 ZNF589Q86UQ0 364 aaPredicted RBP11.42□□□□□ -0.58
CTSA-208ENST00000485627 SP8Q8IXZ3 490 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 SNX21Q969T3 373 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 SEC62Q99442 399 aaKnown RBP11.42□□□□□ -0.58
CTSA-208ENST00000485627 KIF2CQ99661 725 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 LRP2BPQ9P2M1 347 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 IQSEC3Q9UPP2 1182 aaPredicted RBP11.42□□□□□ -0.58
CTSA-208ENST00000485627 RBM8AQ9Y5S9 174 aaKnown RBP11.42□□□□□ -0.58
CTSA-208ENST00000485627 ARAP2Q8WZ64 1704 aa11.42□□□□□ -0.58
CTSA-208ENST00000485627 TAF1P21675 1872 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 COL4A1P02462 1669 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 C6orf229H3BNL8 230 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 ADD2P35612 726 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 SLC4A3P48751 1232 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 UBE3CQ15386 1083 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 STYK1Q6J9G0 422 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 PRPF40BQ6NWY9 871 aaKnown RBP11.41□□□□□ -0.58
CTSA-208ENST00000485627 CCDC129Q6ZRS4 1044 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 CNKSR1Q969H4 720 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 KLRG1Q96E93 195 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 PIH1D3Q9NQM4 214 aaKnown RBP11.41□□□□□ -0.58
CTSA-208ENST00000485627 PODXL2Q9NZ53 605 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
CTSA-208ENST00000485627 A0A0G2JLW4 131 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
CTSA-208ENST00000485627 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 CHAF1AQ13111 956 aaPredicted RBP11.4□□□□□ -0.58
CTSA-208ENST00000485627 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 C15orf52Q6ZUT6 534 aaKnown RBP11.4□□□□□ -0.58
CTSA-208ENST00000485627 ZGPATQ8N5A5 531 aaKnown RBP11.4□□□□□ -0.58
CTSA-208ENST00000485627 OSBP2Q969R2 916 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 DSCC1Q9BVC3 393 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 RAI14Q9P0K7 980 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 ABCF2Q9UG63 623 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 WDR90Q96KV7 1748 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 NRXN2Q9P2S2 1712 aa11.4□□□□□ -0.58
CTSA-208ENST00000485627 MAST3O60307 1309 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 PDS5AQ29RF7 1337 aaKnown RBP11.39□□□□□ -0.59
CTSA-208ENST00000485627 ZNF532Q9HCE3 1301 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 WTIPA6NIX2 430 aaPredicted RBP11.39□□□□□ -0.59
CTSA-208ENST00000485627 M0R2C6 588 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 CHGBP05060 677 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 HSP90AA1P07900 732 aaKnown RBP11.39□□□□□ -0.59
CTSA-208ENST00000485627 PDE6AP16499 860 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 KLRK1P26718 216 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 PSMA5P28066 241 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 MCM2P49736 904 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 PRELPP51888 382 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 NEK4P51957 841 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 KRT32Q14532 448 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 CREB3L3Q68CJ9 461 aa11.39□□□□□ -0.59
CTSA-208ENST00000485627 SPTY2D1Q68D10 685 aaPredicted RBP11.39□□□□□ -0.59
CTSA-208ENST00000485627 DPP8Q6V1X1 898 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms