RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 MTFR1Q15390 333 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 NBPF12Q5TAG4 269 aaPredicted RBP15.74■□□□□ 0.11
SSR4-210ENST00000485612 OPTNQ96CV9 577 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 LRCH3Q96II8 777 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 ELP3Q9H9T3 547 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 MINPP1Q9UNW1 487 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 CACNA1FO60840 1977 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 CEP290O15078 2479 aa15.74■□□□□ 0.11
SSR4-210ENST00000485612 LAMB1P07942 1786 aa15.73■□□□□ 0.11
SSR4-210ENST00000485612 GTF2IP78347 998 aa15.73■□□□□ 0.11
SSR4-210ENST00000485612 RIC3Q7Z5B4 369 aa15.73■□□□□ 0.11
SSR4-210ENST00000485612 TXNRD3Q86VQ6 643 aa15.73■□□□□ 0.11
SSR4-210ENST00000485612 NKX2-3Q8TAU0 364 aa15.73■□□□□ 0.11
SSR4-210ENST00000485612 BRI3BPQ8WY22 251 aa15.73■□□□□ 0.11
SSR4-210ENST00000485612 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
SSR4-210ENST00000485612 CDC5LQ99459 802 aaKnown RBP15.73■□□□□ 0.11
SSR4-210ENST00000485612 ARHGAP39Q9C0H5 1083 aa15.73■□□□□ 0.11
SSR4-210ENST00000485612 ZNF804BA4D1E1 1349 aa15.72■□□□□ 0.11
SSR4-210ENST00000485612 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
SSR4-210ENST00000485612 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
SSR4-210ENST00000485612 MYO1BO43795 1136 aa15.72■□□□□ 0.11
SSR4-210ENST00000485612 GNRH1P01148 92 aa15.72■□□□□ 0.11
SSR4-210ENST00000485612 PCCAP05165 728 aaPredicted RBP15.72■□□□□ 0.11
SSR4-210ENST00000485612 ZNF853P0CG23 659 aa15.72■□□□□ 0.11
SSR4-210ENST00000485612 CCL15Q16663 113 aa15.72■□□□□ 0.11
SSR4-210ENST00000485612 MTMR14Q8NCE2 650 aa15.72■□□□□ 0.11
SSR4-210ENST00000485612 PHAXQ9H814 394 aaKnown RBP15.72■□□□□ 0.11
SSR4-210ENST00000485612 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
SSR4-210ENST00000485612 BSDC1Q9NW68 430 aaPredicted RBP15.72■□□□□ 0.11
SSR4-210ENST00000485612 HYPKQ9NX55 129 aa15.72■□□□□ 0.11
SSR4-210ENST00000485612 CLRN2A0PK11 232 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
SSR4-210ENST00000485612 APAF1O14727 1248 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 GTF2A2P52657 109 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 PRMT2P55345 433 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 UBE2Q1Q7Z7E8 422 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 FAM43AQ8N2R8 423 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 MYD88Q99836 296 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 PCDHAC2Q9Y5I4 1007 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 A0A1B0GUL6 1792 aa15.71■□□□□ 0.11
SSR4-210ENST00000485612 WDHD1O75717 1129 aaPredicted RBP15.7■□□□□ 0.1
SSR4-210ENST00000485612 GJA8P48165 433 aa15.7■□□□□ 0.1
SSR4-210ENST00000485612 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
SSR4-210ENST00000485612 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
SSR4-210ENST00000485612 LEMD3Q9Y2U8 911 aa15.7■□□□□ 0.1
SSR4-210ENST00000485612 RASA3Q14644 834 aa15.69■□□□□ 0.1
SSR4-210ENST00000485612 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
SSR4-210ENST00000485612 PRMT6Q96LA8 375 aaPredicted RBP15.69■□□□□ 0.1
SSR4-210ENST00000485612 CWC25Q9NXE8 425 aaPredicted RBP15.69■□□□□ 0.1
SSR4-210ENST00000485612 TLR2O60603 784 aa15.68■□□□□ 0.1
SSR4-210ENST00000485612 GJB1P08034 283 aa15.68■□□□□ 0.1
SSR4-210ENST00000485612 GOLGA2Q08379 1002 aa15.68■□□□□ 0.1
SSR4-210ENST00000485612 CFAP100Q494V2 611 aa15.68■□□□□ 0.1
SSR4-210ENST00000485612 C8orf58Q8NAV2 365 aa15.68■□□□□ 0.1
SSR4-210ENST00000485612 COL25A1Q9BXS0 654 aaPredicted RBP15.68■□□□□ 0.1
SSR4-210ENST00000485612 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
SSR4-210ENST00000485612 STAP2Q9UGK3 403 aa15.68■□□□□ 0.1
SSR4-210ENST00000485612 SPDYE2BA6NHP3 402 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 F8W031 263 aaPredicted RBP15.67■□□□□ 0.1
SSR4-210ENST00000485612 EVI5O60447 810 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 ECM2O94769 699 aaPredicted RBP15.67■□□□□ 0.1
SSR4-210ENST00000485612 SPDYE6P0CI01 402 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 CCL5P13501 91 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 KLRK1P26718 216 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 CTSWP56202 376 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.67■□□□□ 0.1
SSR4-210ENST00000485612 CERS5Q8N5B7 392 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 DEFB123Q8N688 67 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 RNF208Q9H0X6 261 aa15.67■□□□□ 0.1
SSR4-210ENST00000485612 HOXD10P28358 340 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 GRK4P32298 578 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 GNAI1P63096 354 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 GPR153Q6NV75 609 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 TTLL11Q8NHH1 800 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 GREM2Q9H772 168 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 CD209Q9NNX6 404 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 SRRDQ9UH36 339 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 STXBP5LQ9Y2K9 1186 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 AOX1Q06278 1338 aa15.66■□□□□ 0.1
SSR4-210ENST00000485612 LAMA3Q16787 3333 aa15.65■□□□□ 0.1
SSR4-210ENST00000485612 FARP2O94887 1054 aaPredicted RBP15.65■□□□□ 0.1
SSR4-210ENST00000485612 RBM5P52756 815 aaKnown RBP eCLIP15.65■□□□□ 0.1
SSR4-210ENST00000485612 MAP3K9P80192 1104 aa15.65■□□□□ 0.1
SSR4-210ENST00000485612 VGLL4Q14135 290 aa15.65■□□□□ 0.1
SSR4-210ENST00000485612 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
SSR4-210ENST00000485612 RAET1EQ8TD07 263 aa15.65■□□□□ 0.1
SSR4-210ENST00000485612 TRIM47Q96LD4 638 aa15.65■□□□□ 0.1
SSR4-210ENST00000485612 RIPOR2Q9Y4F9 1068 aa15.65■□□□□ 0.1
SSR4-210ENST00000485612 CETPP11597 493 aa15.64■□□□□ 0.09
SSR4-210ENST00000485612 IGHMBP2P38935 993 aaKnown RBP15.64■□□□□ 0.09
SSR4-210ENST00000485612 PSMC4P43686 418 aa15.64■□□□□ 0.09
SSR4-210ENST00000485612 CCDC184Q52MB2 194 aa15.64■□□□□ 0.09
SSR4-210ENST00000485612 ANKRD2Q9GZV1 360 aa15.64■□□□□ 0.09
SSR4-210ENST00000485612 ZCCHC17Q9NP64 241 aaKnown RBP15.64■□□□□ 0.09
SSR4-210ENST00000485612 BIN2Q9UBW5 565 aaPredicted RBP15.64■□□□□ 0.09
SSR4-210ENST00000485612 CSADQ9Y600 493 aa15.64■□□□□ 0.09
SSR4-210ENST00000485612 BTBD19C9JJ37 291 aa15.63■□□□□ 0.09
SSR4-210ENST00000485612 CTGFP29279 349 aa15.63■□□□□ 0.09
SSR4-210ENST00000485612 KCNJ4P48050 445 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms