RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CD209Q9NNX6 404 aa17.61■□□□□ 0.41
LRIF1-202ENST00000485275 MAST2Q6P0Q8 1798 aa17.61■□□□□ 0.41
LRIF1-202ENST00000485275 ARFGEF1Q9Y6D6 1849 aa17.61■□□□□ 0.41
LRIF1-202ENST00000485275 ZBTB22O15209 634 aa17.61■□□□□ 0.41
LRIF1-202ENST00000485275 SGSM2O43147 1006 aa17.61■□□□□ 0.41
LRIF1-202ENST00000485275 ZNF804AQ7Z570 1209 aa17.61■□□□□ 0.41
LRIF1-202ENST00000485275 SEC62Q99442 399 aaKnown RBP17.61■□□□□ 0.41
LRIF1-202ENST00000485275 DIAPH3Q9NSV4 1193 aa17.61■□□□□ 0.41
LRIF1-202ENST00000485275 IL1R1P14778 569 aa17.6■□□□□ 0.41
LRIF1-202ENST00000485275 ZNF589Q86UQ0 364 aaPredicted RBP17.6■□□□□ 0.41
LRIF1-202ENST00000485275 FHDC1Q9C0D6 1143 aaPredicted RBP17.6■□□□□ 0.41
LRIF1-202ENST00000485275 GNL3LQ9NVN8 582 aaKnown RBP17.6■□□□□ 0.41
LRIF1-202ENST00000485275 DENND2AQ9ULE3 1009 aa17.6■□□□□ 0.41
LRIF1-202ENST00000485275 PDS5AQ29RF7 1337 aaKnown RBP17.6■□□□□ 0.41
LRIF1-202ENST00000485275 SEMA3EO15041 775 aa17.59■□□□□ 0.41
LRIF1-202ENST00000485275 WASHC4Q2M389 1173 aa17.59■□□□□ 0.41
LRIF1-202ENST00000485275 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
LRIF1-202ENST00000485275 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
LRIF1-202ENST00000485275 CASC1Q6TDU7 716 aa17.59■□□□□ 0.41
LRIF1-202ENST00000485275 IDH1O75874 414 aaKnown RBP17.58■□□□□ 0.41
LRIF1-202ENST00000485275 CHAF1AQ13111 956 aaPredicted RBP17.58■□□□□ 0.41
LRIF1-202ENST00000485275 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.41
LRIF1-202ENST00000485275 ZNF384Q8TF68 577 aa17.58■□□□□ 0.41
LRIF1-202ENST00000485275 TCRBV5S4A2TA0A5A2 114 aa17.58■□□□□ 0.4
LRIF1-202ENST00000485275 TTF1Q15361 905 aaPredicted RBP17.58■□□□□ 0.4
LRIF1-202ENST00000485275 GRIK5Q16478 980 aa17.58■□□□□ 0.4
LRIF1-202ENST00000485275 DOK7Q18PE1 504 aa17.58■□□□□ 0.4
LRIF1-202ENST00000485275 ZMYM1Q5SVZ6 1142 aa17.58■□□□□ 0.4
LRIF1-202ENST00000485275 CCDC129Q6ZRS4 1044 aa17.58■□□□□ 0.4
LRIF1-202ENST00000485275 TMX4Q9H1E5 349 aaPredicted RBP17.58■□□□□ 0.4
LRIF1-202ENST00000485275 RBM19Q9Y4C8 960 aaKnown RBP17.58■□□□□ 0.4
LRIF1-202ENST00000485275 MAST3O60307 1309 aa17.57■□□□□ 0.4
LRIF1-202ENST00000485275 RNF113AO15541 343 aaKnown RBP17.57■□□□□ 0.4
LRIF1-202ENST00000485275 ADD2P35612 726 aa17.57■□□□□ 0.4
LRIF1-202ENST00000485275 AOC3Q16853 763 aa17.57■□□□□ 0.4
LRIF1-202ENST00000485275 OSBP2Q969R2 916 aa17.57■□□□□ 0.4
LRIF1-202ENST00000485275 ZC3H12CQ9C0D7 883 aaKnown RBP17.57■□□□□ 0.4
LRIF1-202ENST00000485275 M0R2C6 588 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 HIP1O00291 1037 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 FRAT2O75474 233 aaPredicted RBP17.56■□□□□ 0.4
LRIF1-202ENST00000485275 PDE6AP16499 860 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 PRDX5P30044 214 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 TBC1D32Q96NH3 1257 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 DBNDD1Q9H9R9 158 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 ABCF2Q9UG63 623 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 RAD50Q92878 1312 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 SLC9C2Q5TAH2 1124 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 PSMD1Q99460 953 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 USP26Q9BXU7 913 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 COA1Q9GZY4 146 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 LSG1Q9H089 658 aaKnown RBP17.56■□□□□ 0.4
LRIF1-202ENST00000485275 PUS7LQ9H0K6 701 aaKnown RBP17.56■□□□□ 0.4
LRIF1-202ENST00000485275 KCNQ5Q9NR82 932 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 BCS1LQ9Y276 419 aa17.56■□□□□ 0.4
LRIF1-202ENST00000485275 CCDC88AQ3V6T2 1871 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 PSME4Q14997 1843 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 ZNF532Q9HCE3 1301 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 SALL1Q9NSC2 1324 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 NFKBIEO00221 500 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 PTH1RQ03431 593 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 RTKN2Q8IZC4 609 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 EYA3Q99504 573 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 ANO2Q9NQ90 1003 aa17.55■□□□□ 0.4
LRIF1-202ENST00000485275 ADAMTSL1Q8N6G6 1762 aa17.54■□□□□ 0.4
LRIF1-202ENST00000485275 MAGEB6Q8N7X4 407 aa17.54■□□□□ 0.4
LRIF1-202ENST00000485275 ZNF277Q9NRM2 450 aaPredicted RBP17.54■□□□□ 0.4
LRIF1-202ENST00000485275 FOXP2O15409 715 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 TICAM2Q86XR7 235 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 APPBP2Q92624 585 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.53■□□□□ 0.41e-9■□□□□ 9.9
LRIF1-202ENST00000485275 LRP2BPQ9P2M1 347 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 FAM205AQ6ZU69 1335 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 YDJCA8MPS7 323 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 SOCS7O14512 581 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 PPIP5K2O43314 1243 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 ECE2O60344 883 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 REC8O95072 547 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 ZFYP08048 801 aaPredicted RBP17.53■□□□□ 0.4
LRIF1-202ENST00000485275 PRELPP51888 382 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 UBE3CQ15386 1083 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 MCMDC2Q4G0Z9 681 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 VPS53Q5VIR6 699 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 CERS5Q8N5B7 392 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 MXD3Q9BW11 206 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 C22orf23Q9BZE7 217 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 HELLSQ9NRZ9 838 aa17.53■□□□□ 0.4
LRIF1-202ENST00000485275 CCDC171Q6TFL3 1326 aa17.52■□□□□ 0.4
LRIF1-202ENST00000485275 GTF2IP78347 998 aa17.52■□□□□ 0.4
LRIF1-202ENST00000485275 MAP3K12Q12852 859 aa17.52■□□□□ 0.4
LRIF1-202ENST00000485275 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
LRIF1-202ENST00000485275 SOGA3Q5TF21 947 aa17.52■□□□□ 0.4
LRIF1-202ENST00000485275 NSUN4Q96CB9 384 aaKnown RBP17.52■□□□□ 0.4
LRIF1-202ENST00000485275 RBM25P49756 843 aaKnown RBP17.51■□□□□ 0.39
LRIF1-202ENST00000485275 MECOMQ03112 1051 aa17.51■□□□□ 0.39
LRIF1-202ENST00000485275 SUPT20HQ8NEM7 779 aa17.51■□□□□ 0.39
LRIF1-202ENST00000485275 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms