RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 FOXO4P98177 505 aa16.59■□□□□ 0.25
HDAC6-227ENST00000485102 IFIT5Q13325 482 aaKnown RBP16.59■□□□□ 0.25
HDAC6-227ENST00000485102 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
HDAC6-227ENST00000485102 WDR63Q8IWG1 891 aa16.59■□□□□ 0.25
HDAC6-227ENST00000485102 MANSC4A6NHS7 340 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-227ENST00000485102 PPP1R12BO60237 982 aaPredicted RBP16.58■□□□□ 0.24
HDAC6-227ENST00000485102 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
HDAC6-227ENST00000485102 ECM29Q5VYK3 1845 aa16.57■□□□□ 0.24
HDAC6-227ENST00000485102 LAMB1P07942 1786 aa16.57■□□□□ 0.24
HDAC6-227ENST00000485102 FANCIQ9NVI1 1328 aa16.57■□□□□ 0.24
HDAC6-227ENST00000485102 SUPT20HL1Q3ZLR7 823 aa16.57■□□□□ 0.24
HDAC6-227ENST00000485102 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
HDAC6-227ENST00000485102 PRPF38BQ5VTL8 546 aaKnown RBP16.57■□□□□ 0.24
HDAC6-227ENST00000485102 ZNF804AQ7Z570 1209 aa16.57■□□□□ 0.24
HDAC6-227ENST00000485102 SLC10A4Q96EP9 437 aa16.57■□□□□ 0.24
HDAC6-227ENST00000485102 SPDYE2BA6NHP3 402 aa16.56■□□□□ 0.24
HDAC6-227ENST00000485102 SNAP23O00161 211 aa16.56■□□□□ 0.24
HDAC6-227ENST00000485102 MYO1BO43795 1136 aa16.56■□□□□ 0.24
HDAC6-227ENST00000485102 TAF5LO75529 589 aa16.56■□□□□ 0.24
HDAC6-227ENST00000485102 SPDYE6P0CI01 402 aa16.56■□□□□ 0.24
HDAC6-227ENST00000485102 MKRN3Q13064 507 aaKnown RBP16.56■□□□□ 0.24
HDAC6-227ENST00000485102 R3HDMLQ9H3Y0 253 aa16.56■□□□□ 0.24
HDAC6-227ENST00000485102 FAM205AQ6ZU69 1335 aa16.55■□□□□ 0.24
HDAC6-227ENST00000485102 PRKG1Q13976 671 aa16.55■□□□□ 0.24
HDAC6-227ENST00000485102 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
HDAC6-227ENST00000485102 IFNL1Q8IU54 200 aa16.55■□□□□ 0.24
HDAC6-227ENST00000485102 HELBQ8NG08 1087 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-227ENST00000485102 PRMT6Q96LA8 375 aaPredicted RBP16.55■□□□□ 0.24
HDAC6-227ENST00000485102 KIAA0100Q14667 2235 aaKnown RBP16.55■□□□□ 0.24
HDAC6-227ENST00000485102 SSC5DA1L4H1 1573 aa16.55■□□□□ 0.24
HDAC6-227ENST00000485102 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
HDAC6-227ENST00000485102 WNK4Q96J92 1243 aa16.54■□□□□ 0.24
HDAC6-227ENST00000485102 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
HDAC6-227ENST00000485102 GRM8O00222 908 aa16.53■□□□□ 0.24
HDAC6-227ENST00000485102 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
HDAC6-227ENST00000485102 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
HDAC6-227ENST00000485102 LDHAL6AQ6ZMR3 332 aa16.53■□□□□ 0.24
HDAC6-227ENST00000485102 TDRD7Q8NHU6 1098 aaKnown RBP16.53■□□□□ 0.24
HDAC6-227ENST00000485102 PCDHAC2Q9Y5I4 1007 aa16.53■□□□□ 0.24
HDAC6-227ENST00000485102 TESPA1A2RU30 521 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-227ENST00000485102 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-227ENST00000485102 F6X3S4 739 aa16.52■□□□□ 0.24
HDAC6-227ENST00000485102 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-227ENST00000485102 IREB2P48200 963 aaKnown RBP16.52■□□□□ 0.24
HDAC6-227ENST00000485102 UBE4AQ14139 1066 aa16.52■□□□□ 0.24
HDAC6-227ENST00000485102 EPHA10Q5JZY3 1008 aa16.52■□□□□ 0.24
HDAC6-227ENST00000485102 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-227ENST00000485102 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
HDAC6-227ENST00000485102 CLMNQ96JQ2 1002 aa16.52■□□□□ 0.24
HDAC6-227ENST00000485102 FZD1Q9UP38 647 aa16.52■□□□□ 0.24
HDAC6-227ENST00000485102 HTTP42858 3142 aa16.51■□□□□ 0.23
HDAC6-227ENST00000485102 IGF2BP3O00425 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
HDAC6-227ENST00000485102 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
HDAC6-227ENST00000485102 TNFAIP1Q13829 316 aa16.51■□□□□ 0.23
HDAC6-227ENST00000485102 RASA3Q14644 834 aa16.51■□□□□ 0.23
HDAC6-227ENST00000485102 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
HDAC6-227ENST00000485102 ANKRD13AQ8IZ07 590 aa16.51■□□□□ 0.23
HDAC6-227ENST00000485102 SERPINA10Q9UK55 444 aa16.51■□□□□ 0.23
HDAC6-227ENST00000485102 CHMP3Q9Y3E7 222 aa16.51■□□□□ 0.23
HDAC6-227ENST00000485102 CLRN2A0PK11 232 aa16.5■□□□□ 0.23
HDAC6-227ENST00000485102 F8W031 263 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-227ENST00000485102 SPDYE2Q495Y8 402 aa16.5■□□□□ 0.23
HDAC6-227ENST00000485102 OTOP1Q7RTM1 612 aa16.5■□□□□ 0.23
HDAC6-227ENST00000485102 CNNM1Q9NRU3 951 aa16.5■□□□□ 0.23
HDAC6-227ENST00000485102 AOX1Q06278 1338 aa16.49■□□□□ 0.23
HDAC6-227ENST00000485102 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
HDAC6-227ENST00000485102 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-227ENST00000485102 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-227ENST00000485102 VEZTQ9HBM0 779 aa16.49■□□□□ 0.23
HDAC6-227ENST00000485102 TRIM17Q9Y577 477 aa16.49■□□□□ 0.23
HDAC6-227ENST00000485102 MKI67P46013 3256 aaKnown RBP16.49■□□□□ 0.23
HDAC6-227ENST00000485102 HIBADHP31937 336 aaKnown RBP16.48■□□□□ 0.23
HDAC6-227ENST00000485102 GJA5P36382 358 aa16.48■□□□□ 0.23
HDAC6-227ENST00000485102 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
HDAC6-227ENST00000485102 MFSD14BQ5SR56 506 aa16.48■□□□□ 0.23
HDAC6-227ENST00000485102 TEPSINQ96N21 525 aa16.48■□□□□ 0.23
HDAC6-227ENST00000485102 MRS2Q9HD23 443 aa16.48■□□□□ 0.23
HDAC6-227ENST00000485102 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-227ENST00000485102 ZNF70Q9UC06 446 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-227ENST00000485102 CENPFP49454 3210 aa16.48■□□□□ 0.23
HDAC6-227ENST00000485102 UTYO14607 1347 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 PLIN1O60240 522 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 RBM5P52756 815 aaKnown RBP eCLIP16.47■□□□□ 0.23
HDAC6-227ENST00000485102 HDLBPQ00341 1268 aaKnown RBP16.47■□□□□ 0.23
HDAC6-227ENST00000485102 KAZALD1Q96I82 304 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 MS4A4AQ96JQ5 239 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 PTPN18Q99952 460 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 MRIQ9BWK5 157 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 SRCIN1Q9C0H9 1055 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 SPINK5Q9NQ38 1064 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-227ENST00000485102 TTF2Q9UNY4 1162 aaKnown RBP16.47■□□□□ 0.23
HDAC6-227ENST00000485102 PTPN22Q9Y2R2 807 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 RIPOR2Q9Y4F9 1068 aa16.47■□□□□ 0.23
HDAC6-227ENST00000485102 CRHR2Q13324 411 aa16.46■□□□□ 0.23
HDAC6-227ENST00000485102 FBXO33Q7Z6M2 555 aa16.46■□□□□ 0.23
HDAC6-227ENST00000485102 DZIP1LQ8IYY4 767 aaKnown RBP16.46■□□□□ 0.23
HDAC6-227ENST00000485102 ARMC5Q96C12 935 aa16.46■□□□□ 0.23
HDAC6-227ENST00000485102 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
HDAC6-227ENST00000485102 GYG1P46976 350 aa16.45■□□□□ 0.22
HDAC6-227ENST00000485102 SP3Q02447 781 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms