RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-210	ENST00000484752	CD209	Q9NNX6	404 aa		14.02	□□□□□ -0.17
RFTN1-210	ENST00000484752	SNRK	Q9NRH2	765 aa		14.02	□□□□□ -0.17
RFTN1-210	ENST00000484752	HMG20B	Q9P0W2	317 aa		14.02	□□□□□ -0.17
RFTN1-210	ENST00000484752	IRS2	Q9Y4H2	1338 aa		14.01	□□□□□ -0.17
RFTN1-210	ENST00000484752	IL1R1	P14778	569 aa		14.01	□□□□□ -0.17
RFTN1-210	ENST00000484752	MAP3K12	Q12852	859 aa		14.01	□□□□□ -0.17
RFTN1-210	ENST00000484752	PODN	Q7Z5L7	613 aa		14.01	□□□□□ -0.17
RFTN1-210	ENST00000484752	TDRD7	Q8NHU6	1098 aa	Known RBP	14.01	□□□□□ -0.17
RFTN1-210	ENST00000484752	LRP2BP	Q9P2M1	347 aa		14.01	□□□□□ -0.17
RFTN1-210	ENST00000484752	WWC3	Q9ULE0	1092 aa		14.01	□□□□□ -0.17
RFTN1-210	ENST00000484752	LTBP3	Q9NS15	1303 aa		14	□□□□□ -0.17
RFTN1-210	ENST00000484752	CHAF1A	Q13111	956 aa	Predicted RBP	14	□□□□□ -0.17
RFTN1-210	ENST00000484752	TXNRD3	Q86VQ6	643 aa		14	□□□□□ -0.17
RFTN1-210	ENST00000484752	LARGE2	Q8N3Y3	721 aa		14	□□□□□ -0.17
RFTN1-210	ENST00000484752	JDP2	Q8WYK2	163 aa		14	□□□□□ -0.17
RFTN1-210	ENST00000484752	GPR101	Q96P66	508 aa	Predicted RBP	14	□□□□□ -0.17
RFTN1-210	ENST00000484752	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	14	□□□□□ -0.17
RFTN1-210	ENST00000484752	BRCA1	P38398	1863 aa	Known RBP	13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	SNED1	Q8TER0	1413 aa		13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	SALL1	Q9NSC2	1324 aa		13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	WTIP	A6NIX2	430 aa	Predicted RBP	13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	IDH1	O75874	414 aa	Known RBP	13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	SCARF1	Q14162	830 aa		13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	AOC3	Q16853	763 aa		13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	SLC51A	Q86UW1	340 aa		13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	NIM1K	Q8IY84	436 aa		13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	ABCF2	Q9UG63	623 aa		13.99	□□□□□ -0.17
RFTN1-210	ENST00000484752	RAD50	Q92878	1312 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	ECE2	O60344	883 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	REC8	O95072	547 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	CYP2E1	P05181	493 aa	Predicted RBP	13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	IARS	P41252	1262 aa	Known RBP	13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	MFAP1	P55081	439 aa	Known RBP	13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	PI16	Q6UXB8	463 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	TBC1D9	Q6ZT07	1266 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	ERICH6	Q7L0X2	663 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	FBXW7	Q969H0	707 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	RAI14	Q9P0K7	980 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	NDUFB9	Q9Y6M9	179 aa		13.98	□□□□□ -0.17
RFTN1-210	ENST00000484752	MAST3	O60307	1309 aa		13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	FAM205A	Q6ZU69	1335 aa		13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	RNF113A	O15541	343 aa	Known RBP	13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	CHML	P26374	656 aa		13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	DOK7	Q18PE1	504 aa		13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	C8orf34	Q49A92	452 aa		13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	SLF2	Q8IX21	1173 aa		13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	EDC3	Q96F86	508 aa	Known RBP	13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	DBNDD1	Q9H9R9	158 aa		13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	SUGT1	Q9Y2Z0	365 aa		13.97	□□□□□ -0.17
RFTN1-210	ENST00000484752	LDHB	P07195	334 aa	Known RBP	13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	GSTO1	P78417	241 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	SLC9C2	Q5TAH2	1124 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	TTLL5	Q6EMB2	1281 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	KIAA1211	Q6ZU35	1233 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	ARHGAP27	Q6ZUM4	889 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	DZIP1	Q86YF9	867 aa	Known RBP	13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	BACH2	Q9BYV9	841 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	ANTXR1	Q9H6X2	564 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	HELLS	Q9NRZ9	838 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	ARFGEF1	Q9Y6D6	1849 aa		13.96	□□□□□ -0.17
RFTN1-210	ENST00000484752	MYO3B	Q8WXR4	1341 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	COL1A1	P02452	1464 aa	Predicted RBP	13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	USP17L3	A6NCW0	530 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	USP17L4	A6NCW7	530 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	FKBP1A	P62942	108 aa	Known RBP	13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	GTF2I	P78347	998 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	UBE3C	Q15386	1083 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	MFSD14B	Q5SR56	506 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	STRIP1	Q5VSL9	837 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	CWC27	Q6UX04	472 aa	Known RBP	13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	USP17L1	Q7RTZ2	530 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	NOL10	Q9BSC4	688 aa	Known RBP	13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	PIH1D3	Q9NQM4	214 aa	Known RBP	13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	ZNRF3	Q9ULT6	936 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	AK9	Q5TCS8	1911 aa		13.95	□□□□□ -0.18
RFTN1-210	ENST00000484752	MYH13	Q9UKX3	1938 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	NFKBIE	O00221	500 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	GRIN3B	O60391	1043 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	LDHC	P07864	332 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	GPR162	Q16538	588 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	MCMDC2	Q4G0Z9	681 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	NAA16	Q6N069	864 aa	Predicted RBP	13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	CERS3	Q8IU89	383 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	MAGEB6	Q8N7X4	407 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	APPBP2	Q92624	585 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	ESYT1	Q9BSJ8	1104 aa		13.94	□□□□□ -0.18
RFTN1-210	ENST00000484752	DCAF8L1	A6NGE4	600 aa		13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	PDE6A	P16499	860 aa		13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	LMNB1	P20700	586 aa		13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	ADD2	P35612	726 aa		13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	EIF6	P56537	245 aa	Known RBP	13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	NMI	Q13287	307 aa	Predicted RBP	13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	TNIP1	Q15025	636 aa		13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	AIDA	Q96BJ3	306 aa		13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	JAG2	Q9Y219	1238 aa		13.93	□□□□□ -0.18
RFTN1-210	ENST00000484752	ZNF532	Q9HCE3	1301 aa		13.92	□□□□□ -0.18
RFTN1-210	ENST00000484752	AKAP11	Q9UKA4	1901 aa		13.92	□□□□□ -0.18
RFTN1-210	ENST00000484752	EPB41L2	O43491	1005 aa	Known RBP	13.92	□□□□□ -0.18
RFTN1-210	ENST00000484752	MCC	P23508	829 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms