RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 USP17L8P0C7I0 530 aa19.66■□□□□ 0.74
UPF3A-208ENST00000484246 TFCP2Q12800 502 aa19.66■□□□□ 0.74
UPF3A-208ENST00000484246 EAPPQ56P03 285 aaPredicted RBP19.66■□□□□ 0.74
UPF3A-208ENST00000484246 VPS37DQ86XT2 251 aa19.66■□□□□ 0.74
UPF3A-208ENST00000484246 SIRT2Q8IXJ6 389 aa19.66■□□□□ 0.74
UPF3A-208ENST00000484246 TRPM4Q8TD43 1214 aa19.66■□□□□ 0.74
UPF3A-208ENST00000484246 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
UPF3A-208ENST00000484246 SURF6O75683 361 aaKnown RBP19.65■□□□□ 0.74
UPF3A-208ENST00000484246 CERS5Q8N5B7 392 aa19.65■□□□□ 0.74
UPF3A-208ENST00000484246 A0A1B0GUL7 405 aa19.64■□□□□ 0.73
UPF3A-208ENST00000484246 SEMA3EO15041 775 aa19.64■□□□□ 0.73
UPF3A-208ENST00000484246 BCAMP50895 628 aa19.64■□□□□ 0.73
UPF3A-208ENST00000484246 HIRAP54198 1017 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-208ENST00000484246 MXD3Q9BW11 206 aa19.64■□□□□ 0.73
UPF3A-208ENST00000484246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-208ENST00000484246 PDS5AQ29RF7 1337 aaKnown RBP19.63■□□□□ 0.73
UPF3A-208ENST00000484246 HSPA6P17066 643 aa19.63■□□□□ 0.73
UPF3A-208ENST00000484246 KIF4BQ2VIQ3 1234 aa19.63■□□□□ 0.73
UPF3A-208ENST00000484246 HSP90AB4PQ58FF6 505 aa19.63■□□□□ 0.73
UPF3A-208ENST00000484246 ERC1Q8IUD2 1116 aa19.63■□□□□ 0.73
UPF3A-208ENST00000484246 TBC1D22AQ8WUA7 517 aa19.63■□□□□ 0.73
UPF3A-208ENST00000484246 RNF39Q9H2S5 420 aa19.63■□□□□ 0.73
UPF3A-208ENST00000484246 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
UPF3A-208ENST00000484246 COL1A1P02452 1464 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-208ENST00000484246 PASKQ96RG2 1323 aa19.62■□□□□ 0.73
UPF3A-208ENST00000484246 ITGBL1O95965 494 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-208ENST00000484246 EGFRP00533 1210 aa19.62■□□□□ 0.73
UPF3A-208ENST00000484246 SAMD7Q7Z3H4 446 aa19.62■□□□□ 0.73
UPF3A-208ENST00000484246 OGFOD1Q8N543 542 aa19.62■□□□□ 0.73
UPF3A-208ENST00000484246 FBXW7Q969H0 707 aa19.62■□□□□ 0.73
UPF3A-208ENST00000484246 MYOZ2Q9NPC6 264 aa19.62■□□□□ 0.73
UPF3A-208ENST00000484246 ADORA1P30542 326 aa19.61■□□□□ 0.73
UPF3A-208ENST00000484246 TBC1D10BQ4KMP7 808 aaPredicted RBP19.61■□□□□ 0.73
UPF3A-208ENST00000484246 MFSD14BQ5SR56 506 aa19.61■□□□□ 0.73
UPF3A-208ENST00000484246 CCDC102BQ68D86 513 aa19.61■□□□□ 0.73
UPF3A-208ENST00000484246 MTMR14Q8NCE2 650 aa19.61■□□□□ 0.73
UPF3A-208ENST00000484246 XAGE2Q96GT9 111 aa19.61■□□□□ 0.73
UPF3A-208ENST00000484246 GNL3LQ9NVN8 582 aaKnown RBP19.61■□□□□ 0.73
UPF3A-208ENST00000484246 HDAC9Q9UKV0 1011 aa19.61■□□□□ 0.73
UPF3A-208ENST00000484246 SUGT1Q9Y2Z0 365 aa19.61■□□□□ 0.73
UPF3A-208ENST00000484246 PHKA1P46020 1223 aa19.6■□□□□ 0.73
UPF3A-208ENST00000484246 TIMM10P62072 90 aa19.6■□□□□ 0.73
UPF3A-208ENST00000484246 OS9Q13438 667 aaPredicted RBP19.6■□□□□ 0.73
UPF3A-208ENST00000484246 AAMPQ13685 434 aa19.6■□□□□ 0.73
UPF3A-208ENST00000484246 TNNI3KQ59H18 835 aa19.6■□□□□ 0.73
UPF3A-208ENST00000484246 MAP1SQ66K74 1059 aaPredicted RBP19.6■□□□□ 0.73
UPF3A-208ENST00000484246 KIAA0825Q8IV33 1275 aa19.6■□□□□ 0.73
UPF3A-208ENST00000484246 CNTROBQ8N137 903 aa19.6■□□□□ 0.73
UPF3A-208ENST00000484246 ZBED3Q96IU2 234 aaPredicted RBP19.6■□□□□ 0.73
UPF3A-208ENST00000484246 CLEC11AQ9Y240 323 aa19.6■□□□□ 0.73
UPF3A-208ENST00000484246 FPGT-TNNI3KV9GXZ4 949 aa19.6■□□□□ 0.73
UPF3A-208ENST00000484246 PITPNM2Q9BZ72 1349 aa19.59■□□□□ 0.73
UPF3A-208ENST00000484246 SALL1Q9NSC2 1324 aa19.59■□□□□ 0.73
UPF3A-208ENST00000484246 WDR66Q8TBY9 1149 aa19.59■□□□□ 0.73
UPF3A-208ENST00000484246 DENND2AQ9ULE3 1009 aa19.59■□□□□ 0.73
UPF3A-208ENST00000484246 FRAT2O75474 233 aaPredicted RBP19.58■□□□□ 0.72
UPF3A-208ENST00000484246 CRBNQ96SW2 442 aa19.58■□□□□ 0.72
UPF3A-208ENST00000484246 IQSEC3Q9UPP2 1182 aaPredicted RBP19.58■□□□□ 0.72
UPF3A-208ENST00000484246 EXOC6BQ9Y2D4 811 aa19.58■□□□□ 0.72
UPF3A-208ENST00000484246 RAB11FIP3O75154 756 aa19.57■□□□□ 0.72
UPF3A-208ENST00000484246 ARID4AP29374 1257 aaPredicted RBP19.57■□□□□ 0.72
UPF3A-208ENST00000484246 APLP1P51693 650 aa19.57■□□□□ 0.72
UPF3A-208ENST00000484246 HDLBPQ00341 1268 aaKnown RBP19.57■□□□□ 0.72
UPF3A-208ENST00000484246 KIF1BPQ96EK5 621 aa19.57■□□□□ 0.72
UPF3A-208ENST00000484246 JAG2Q9Y219 1238 aa19.57■□□□□ 0.72
UPF3A-208ENST00000484246 U3KPZ7 1027 aaPredicted RBP19.57■□□□□ 0.72
UPF3A-208ENST00000484246 WNT10BO00744 389 aa19.56■□□□□ 0.72
UPF3A-208ENST00000484246 CHAF1AQ13111 956 aaPredicted RBP19.56■□□□□ 0.72
UPF3A-208ENST00000484246 RASGRF1Q13972 1273 aa19.56■□□□□ 0.72
UPF3A-208ENST00000484246 RHPN1Q8TCX5 695 aa19.56■□□□□ 0.72
UPF3A-208ENST00000484246 ZNF512BQ96KM6 892 aaPredicted RBP19.56■□□□□ 0.72
UPF3A-208ENST00000484246 MRIQ9BWK5 157 aa19.56■□□□□ 0.72
UPF3A-208ENST00000484246 GGA3Q9NZ52 723 aa19.56■□□□□ 0.72
UPF3A-208ENST00000484246 SERPINA10Q9UK55 444 aa19.56■□□□□ 0.72
UPF3A-208ENST00000484246 MAST3O60307 1309 aa19.55■□□□□ 0.72
UPF3A-208ENST00000484246 SCARF1Q14162 830 aa19.55■□□□□ 0.72
UPF3A-208ENST00000484246 RBM26Q5T8P6 1007 aaKnown RBP19.55■□□□□ 0.72
UPF3A-208ENST00000484246 CDC37L1Q7L3B6 337 aa19.55■□□□□ 0.72
UPF3A-208ENST00000484246 EAF2Q96CJ1 260 aaPredicted RBP19.55■□□□□ 0.72
UPF3A-208ENST00000484246 NEUROD6Q96NK8 337 aa19.55■□□□□ 0.72
UPF3A-208ENST00000484246 SPDYE2BA6NHP3 402 aa19.54■□□□□ 0.72
UPF3A-208ENST00000484246 UQCRFS1P1P0C7P4 283 aa19.54■□□□□ 0.72
UPF3A-208ENST00000484246 SPDYE6P0CI01 402 aa19.54■□□□□ 0.72
UPF3A-208ENST00000484246 ZGPATQ8N5A5 531 aaKnown RBP19.54■□□□□ 0.72
UPF3A-208ENST00000484246 DBNDD2Q9BQY9 259 aa19.54■□□□□ 0.72
UPF3A-208ENST00000484246 DBNLQ9UJU6 430 aaKnown RBP19.54■□□□□ 0.72
UPF3A-208ENST00000484246 TTF2Q9UNY4 1162 aaKnown RBP19.54■□□□□ 0.72
UPF3A-208ENST00000484246 PCDHB15Q9Y5E8 787 aa19.54■□□□□ 0.72
UPF3A-208ENST00000484246 DLGAP5Q15398 846 aa19.53■□□□□ 0.72
UPF3A-208ENST00000484246 GRIK5Q16478 980 aa19.53■□□□□ 0.72
UPF3A-208ENST00000484246 NBPF9Q3BBW0 867 aa19.53■□□□□ 0.72
UPF3A-208ENST00000484246 DCPSQ96C86 337 aaKnown RBP19.53■□□□□ 0.72
UPF3A-208ENST00000484246 ASTN2O75129 1339 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-208ENST00000484246 F8W031 263 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-208ENST00000484246 CFAP100Q494V2 611 aa19.52■□□□□ 0.72
UPF3A-208ENST00000484246 GORABQ5T7V8 394 aa19.52■□□□□ 0.72
UPF3A-208ENST00000484246 ANGEL2Q5VTE6 544 aaKnown RBP19.52■□□□□ 0.72
UPF3A-208ENST00000484246 KRT26Q7Z3Y9 468 aa19.52■□□□□ 0.72
UPF3A-208ENST00000484246 GLIS2Q9BZE0 524 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-208ENST00000484246 DCTPP1Q9H773 170 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms