RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 LRRCC1Q9C099 1032 aa23.95■■□□□ 1.42
SNED1-210ENST00000483962 GPRC5DQ9NZD1 345 aa23.95■■□□□ 1.42
SNED1-210ENST00000483962 DBNLQ9UJU6 430 aaKnown RBP23.95■■□□□ 1.42
SNED1-210ENST00000483962 FRAT2O75474 233 aaPredicted RBP23.94■■□□□ 1.42
SNED1-210ENST00000483962 VEGFAP15692 232 aaPredicted RBP23.94■■□□□ 1.42
SNED1-210ENST00000483962 RPS12P25398 132 aaKnown RBP23.94■■□□□ 1.42
SNED1-210ENST00000483962 EPS15P42566 896 aa23.94■■□□□ 1.42
SNED1-210ENST00000483962 GORABQ5T7V8 394 aa23.94■■□□□ 1.42
SNED1-210ENST00000483962 CERS5Q8N5B7 392 aa23.94■■□□□ 1.42
SNED1-210ENST00000483962 DPF2Q92785 391 aa23.94■■□□□ 1.42
SNED1-210ENST00000483962 GNL3LQ9NVN8 582 aaKnown RBP23.94■■□□□ 1.42
SNED1-210ENST00000483962 HACL1Q9UJ83 578 aa23.94■■□□□ 1.42
SNED1-210ENST00000483962 KIF3CO14782 793 aa23.93■■□□□ 1.42
SNED1-210ENST00000483962 CHAF1AQ13111 956 aaPredicted RBP23.93■■□□□ 1.42
SNED1-210ENST00000483962 CLASRPQ8N2M8 674 aaKnown RBP23.93■■□□□ 1.42
SNED1-210ENST00000483962 AGBL3Q8NEM8 1001 aa23.93■■□□□ 1.42
SNED1-210ENST00000483962 BCL11AQ9H165 835 aa23.93■■□□□ 1.42
SNED1-210ENST00000483962 RWDD1Q9H446 243 aaPredicted RBP23.93■■□□□ 1.42
SNED1-210ENST00000483962 CNOT7Q9UIV1 285 aaKnown RBP23.93■■□□□ 1.42
SNED1-210ENST00000483962 ZBTB22O15209 634 aa23.92■■□□□ 1.42
SNED1-210ENST00000483962 TAF1DQ9H5J8 278 aaPredicted RBP23.92■■□□□ 1.42
SNED1-210ENST00000483962 IQCA1LA6NCM1 817 aa23.91■■□□□ 1.42
SNED1-210ENST00000483962 LMOD1P29536 600 aaPredicted RBP23.91■■□□□ 1.42
SNED1-210ENST00000483962 FKBP1AP62942 108 aaKnown RBP23.91■■□□□ 1.42
SNED1-210ENST00000483962 RASGRF1Q13972 1273 aa23.91■■□□□ 1.42
SNED1-210ENST00000483962 MYO3BQ8WXR4 1341 aa23.9■■□□□ 1.42
SNED1-210ENST00000483962 SEMA3EO15041 775 aa23.9■■□□□ 1.42
SNED1-210ENST00000483962 ARID4AP29374 1257 aaPredicted RBP23.9■■□□□ 1.42
SNED1-210ENST00000483962 EPHX2P34913 555 aa23.9■■□□□ 1.42
SNED1-210ENST00000483962 SCARF1Q14162 830 aa23.9■■□□□ 1.42
SNED1-210ENST00000483962 MICALL2Q8IY33 904 aa23.9■■□□□ 1.42
SNED1-210ENST00000483962 GCC1Q96CN9 775 aa23.9■■□□□ 1.42
SNED1-210ENST00000483962 DENND2AQ9ULE3 1009 aa23.9■■□□□ 1.42
SNED1-210ENST00000483962 AKAP11Q9UKA4 1901 aa23.9■■□□□ 1.42
SNED1-210ENST00000483962 CCDC158Q5M9N0 1113 aa23.89■■□□□ 1.41
SNED1-210ENST00000483962 MFSD14BQ5SR56 506 aa23.89■■□□□ 1.41
SNED1-210ENST00000483962 TTC39AQ5SRH9 613 aa23.89■■□□□ 1.41
SNED1-210ENST00000483962 IFIT2P09913 472 aaKnown RBP23.88■■□□□ 1.41
SNED1-210ENST00000483962 UQCRFS1P1P0C7P4 283 aa23.88■■□□□ 1.41
SNED1-210ENST00000483962 GRIK5Q16478 980 aa23.88■■□□□ 1.41
SNED1-210ENST00000483962 KIAA0825Q8IV33 1275 aa23.88■■□□□ 1.41
SNED1-210ENST00000483962 SMC5Q8IY18 1101 aa23.88■■□□□ 1.41
SNED1-210ENST00000483962 HMG20BQ9P0W2 317 aa23.88■■□□□ 1.41
SNED1-210ENST00000483962 H7C1D1 291 aa23.87■■□□□ 1.41
SNED1-210ENST00000483962 USP17L8P0C7I0 530 aa23.87■■□□□ 1.41
SNED1-210ENST00000483962 MCAMP43121 646 aa23.87■■□□□ 1.41
SNED1-210ENST00000483962 ZNF280AP59817 542 aaPredicted RBP23.87■■□□□ 1.41
SNED1-210ENST00000483962 PI16Q6UXB8 463 aa23.87■■□□□ 1.41
SNED1-210ENST00000483962 WDR66Q8TBY9 1149 aa23.87■■□□□ 1.41
SNED1-210ENST00000483962 TBC1D22AQ8WUA7 517 aa23.87■■□□□ 1.41
SNED1-210ENST00000483962 ZNF512BQ96KM6 892 aaPredicted RBP23.87■■□□□ 1.41
SNED1-210ENST00000483962 ADARB2Q9NS39 739 aaKnown RBP23.87■■□□□ 1.41
SNED1-210ENST00000483962 PDS5AQ29RF7 1337 aaKnown RBP23.86■■□□□ 1.41
SNED1-210ENST00000483962 EGFRP00533 1210 aa23.86■■□□□ 1.41
SNED1-210ENST00000483962 ANKRD45Q5TZF3 282 aa23.86■■□□□ 1.41
SNED1-210ENST00000483962 SAMD7Q7Z3H4 446 aa23.86■■□□□ 1.41
SNED1-210ENST00000483962 TRPM4Q8TD43 1214 aa23.86■■□□□ 1.41
SNED1-210ENST00000483962 F8W031 263 aaPredicted RBP23.85■■□□□ 1.41
SNED1-210ENST00000483962 NEFLP07196 543 aa23.85■■□□□ 1.41
SNED1-210ENST00000483962 POTEIP0CG38 1075 aa23.85■■□□□ 1.41
SNED1-210ENST00000483962 POTEJP0CG39 1038 aa23.85■■□□□ 1.41
SNED1-210ENST00000483962 TBC1D10BQ4KMP7 808 aaPredicted RBP23.85■■□□□ 1.41
SNED1-210ENST00000483962 C16orf71Q8IYS4 520 aaPredicted RBP23.85■■□□□ 1.41
SNED1-210ENST00000483962 SPATA5Q8NB90 893 aa23.85■■□□□ 1.41
SNED1-210ENST00000483962 ADAMTSL1Q8N6G6 1762 aa23.85■■□□□ 1.41
SNED1-210ENST00000483962 HIRAP54198 1017 aaPredicted RBP23.84■■□□□ 1.41
SNED1-210ENST00000483962 EAPPQ56P03 285 aaPredicted RBP23.84■■□□□ 1.41
SNED1-210ENST00000483962 SNRKQ9NRH2 765 aa23.84■■□□□ 1.41
SNED1-210ENST00000483962 SALL1Q9NSC2 1324 aa23.84■■□□□ 1.41
SNED1-210ENST00000483962 RBM26Q5T8P6 1007 aaKnown RBP23.83■■□□□ 1.41
SNED1-210ENST00000483962 USP50Q70EL3 339 aaPredicted RBP23.83■■□□□ 1.41
SNED1-210ENST00000483962 OGFOD1Q8N543 542 aa23.83■■□□□ 1.41
SNED1-210ENST00000483962 MYOZ2Q9NPC6 264 aa23.83■■□□□ 1.41
SNED1-210ENST00000483962 B4GALNT3Q6L9W6 998 aa23.82■■□□□ 1.4
SNED1-210ENST00000483962 PNMA8AQ86V59 439 aaPredicted RBP23.82■■□□□ 1.4
SNED1-210ENST00000483962 TTF2Q9UNY4 1162 aaKnown RBP23.82■■□□□ 1.4
SNED1-210ENST00000483962 MYO5AQ9Y4I1 1855 aaKnown RBP23.81■■□□□ 1.4
SNED1-210ENST00000483962 PRDX5P30044 214 aa23.81■■□□□ 1.4
SNED1-210ENST00000483962 ZAP70P43403 619 aa23.81■■□□□ 1.4
SNED1-210ENST00000483962 KIF4BQ2VIQ3 1234 aa23.81■■□□□ 1.4
SNED1-210ENST00000483962 TBC1D9Q6ZT07 1266 aa23.81■■□□□ 1.4
SNED1-210ENST00000483962 OTUD7AQ8TE49 926 aaPredicted RBP23.81■■□□□ 1.4
SNED1-210ENST00000483962 HDAC9Q9UKV0 1011 aa23.81■■□□□ 1.4
SNED1-210ENST00000483962 SUGT1Q9Y2Z0 365 aa23.81■■□□□ 1.4
SNED1-210ENST00000483962 MMP14P50281 582 aa23.8■■□□□ 1.4
SNED1-210ENST00000483962 PCDHAC2Q9Y5I4 1007 aa23.8■■□□□ 1.4
SNED1-210ENST00000483962 NDUFB9Q9Y6M9 179 aa23.8■■□□□ 1.4
SNED1-210ENST00000483962 TOMM70O94826 608 aa23.79■■□□□ 1.4
SNED1-210ENST00000483962 CYP2E1P05181 493 aaPredicted RBP23.79■■□□□ 1.4
SNED1-210ENST00000483962 NUCB1Q02818 461 aa23.79■■□□□ 1.4
SNED1-210ENST00000483962 LDHDQ86WU2 507 aa23.79■■□□□ 1.4
SNED1-210ENST00000483962 ABCF2Q9UG63 623 aa23.79■■□□□ 1.4
SNED1-210ENST00000483962 LDHBP07195 334 aaKnown RBP23.78■■□□□ 1.4
SNED1-210ENST00000483962 ATP5JP18859 108 aa23.78■■□□□ 1.4
SNED1-210ENST00000483962 ZGPATQ8N5A5 531 aaKnown RBP23.78■■□□□ 1.4
SNED1-210ENST00000483962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.78■■□□□ 1.4
SNED1-210ENST00000483962 ZBED3Q96IU2 234 aaPredicted RBP23.78■■□□□ 1.4
SNED1-210ENST00000483962 LNPKQ9C0E8 428 aa23.78■■□□□ 1.4
SNED1-210ENST00000483962 ZBTB47Q9UFB7 747 aaPredicted RBP23.78■■□□□ 1.4
SNED1-210ENST00000483962 CLEC11AQ9Y240 323 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms