RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CARD10Q9BWT7 1032 aa6.51□□□□□ -1.37
PTCD3-214ENST00000483925 COL17A1Q9UMD9 1497 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-214ENST00000483925 RECKO95980 971 aa6.5□□□□□ -1.37
PTCD3-214ENST00000483925 TGFB1P01137 390 aa6.5□□□□□ -1.37
PTCD3-214ENST00000483925 CYP2E1P05181 493 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-214ENST00000483925 EPHA1P21709 976 aa6.5□□□□□ -1.37
PTCD3-214ENST00000483925 ERCC5P28715 1186 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-214ENST00000483925 PDE12Q6L8Q7 609 aaKnown RBP6.5□□□□□ -1.37
PTCD3-214ENST00000483925 KIAA1211Q6ZU35 1233 aa6.5□□□□□ -1.37
PTCD3-214ENST00000483925 FAM46AQ96IP4 442 aaKnown RBP6.5□□□□□ -1.37
PTCD3-214ENST00000483925 ADAM19Q9H013 955 aa6.5□□□□□ -1.37
PTCD3-214ENST00000483925 ELP3Q9H9T3 547 aa6.5□□□□□ -1.37
PTCD3-214ENST00000483925 SH2B1Q9NRF2 756 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-214ENST00000483925 SLAIN2Q9P270 581 aa6.5□□□□□ -1.37
PTCD3-214ENST00000483925 ANKRD62A6NC57 917 aa6.49□□□□□ -1.37
PTCD3-214ENST00000483925 MED26O95402 600 aa6.49□□□□□ -1.37
PTCD3-214ENST00000483925 NFIAQ12857 509 aa6.49□□□□□ -1.37
PTCD3-214ENST00000483925 TSNAXIP1Q2TAA8 658 aa6.49□□□□□ -1.37
PTCD3-214ENST00000483925 ADAMTSL4Q6UY14 1074 aa6.49□□□□□ -1.37
PTCD3-214ENST00000483925 ASB16Q96NS5 453 aa6.49□□□□□ -1.37
PTCD3-214ENST00000483925 POP1Q99575 1024 aaKnown RBP6.49□□□□□ -1.37
PTCD3-214ENST00000483925 SEC31BQ9NQW1 1179 aa6.49□□□□□ -1.37
PTCD3-214ENST00000483925 KIAA1324LA8MWY0 1029 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-214ENST00000483925 DDX3YO15523 660 aaKnown RBP6.48□□□□□ -1.37
PTCD3-214ENST00000483925 PAX4O43316 350 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 RPLP1P05386 114 aaKnown RBP6.48□□□□□ -1.37
PTCD3-214ENST00000483925 MAPK1P28482 360 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 IRAK1P51617 712 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 CABP4P57796 275 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 RNF43Q68DV7 783 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 INTS5Q6P9B9 1019 aaKnown RBP6.48□□□□□ -1.37
PTCD3-214ENST00000483925 ZNF438Q7Z4V0 828 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 ZDHHC13Q8IUH4 622 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 GLYCTKQ8IVS8 523 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 TRIM42Q8IWZ5 723 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 WNT8BQ93098 351 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 NUDT16Q96DE0 195 aaKnown RBP6.48□□□□□ -1.37
PTCD3-214ENST00000483925 KLHDC7BQ96G42 594 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 MYRFLQ96LU7 910 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 C7orf69Q9H7B7 122 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 GOLGA2P5Q9HBQ8 144 aa6.48□□□□□ -1.37
PTCD3-214ENST00000483925 HMX2A2RU54 273 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 H3BRJ5 948 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 SCAMP3O14828 347 aaKnown RBP6.47□□□□□ -1.37
PTCD3-214ENST00000483925 ADAM11O75078 769 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 ABL1P00519 1130 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 ITGAEP38570 1179 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 GRIK1P39086 918 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 PIP4K2BP78356 416 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 CLEC10AQ8IUN9 316 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 UBASH3BQ8TF42 649 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 DBNDD2Q9BQY9 259 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 OSGEPQ9NPF4 335 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 TMEM63CQ9P1W3 806 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 DCTN4Q9UJW0 460 aa6.47□□□□□ -1.37
PTCD3-214ENST00000483925 SART1O43290 800 aaKnown RBP6.46□□□□□ -1.38
PTCD3-214ENST00000483925 ICMTO60725 284 aa6.46□□□□□ -1.38
PTCD3-214ENST00000483925 EAPPQ56P03 285 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-214ENST00000483925 FAM20CQ8IXL6 584 aa6.46□□□□□ -1.38
PTCD3-214ENST00000483925 HIRIP3Q9BW71 556 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-214ENST00000483925 CNTN3Q9P232 1028 aa6.46□□□□□ -1.38
PTCD3-214ENST00000483925 KANSL3Q9P2N6 904 aa6.46□□□□□ -1.38
PTCD3-214ENST00000483925 SALL4Q9UJQ4 1053 aa6.46□□□□□ -1.38
PTCD3-214ENST00000483925 H3BRB1 525 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 PCSK2P16519 638 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 CES1P23141 567 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 GP2P55259 537 aaKnown RBP6.45□□□□□ -1.38
PTCD3-214ENST00000483925 ANKRD34AQ69YU3 496 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 XKR5Q6UX68 686 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 NOP9Q86U38 636 aaKnown RBP6.45□□□□□ -1.38
PTCD3-214ENST00000483925 ATCAYQ86WG3 371 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 FAM83CQ9BQN1 747 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 RNF208Q9H0X6 261 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 TUT1Q9H6E5 874 aaKnown RBP6.45□□□□□ -1.38
PTCD3-214ENST00000483925 SEPT3Q9UH03 358 aa6.45□□□□□ -1.38
PTCD3-214ENST00000483925 OAS3Q9Y6K5 1087 aaKnown RBP6.45□□□□□ -1.38
PTCD3-214ENST00000483925 NFKBIEO00221 500 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 BMP3P12645 472 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 TXKP42681 527 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 TAGLNQ01995 201 aaKnown RBP6.44□□□□□ -1.38
PTCD3-214ENST00000483925 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-214ENST00000483925 BEND4Q6ZU67 534 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 DPH6Q7L8W6 267 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 C1orf127Q8N9H9 656 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 TTC16Q8NEE8 873 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 PMEPA1Q969W9 287 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 BACH2Q9BYV9 841 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 KCNF1Q9H3M0 494 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 CWC22Q9HCG8 908 aaKnown RBP6.44□□□□□ -1.38
PTCD3-214ENST00000483925 DZANK1Q9NVP4 752 aa6.44□□□□□ -1.38
PTCD3-214ENST00000483925 PRR19A6NJB7 356 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 PDE2AO00408 941 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-214ENST00000483925 SPINK2P20155 84 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 ARL4DP49703 201 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 NLRP12P59046 1061 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 FGD1P98174 961 aa6.43□□□□□ -1.38
PTCD3-214ENST00000483925 DNM1Q05193 864 aaKnown RBP6.43□□□□□ -1.38
PTCD3-214ENST00000483925 SF3B2Q13435 895 aaKnown RBP6.43□□□□□ -1.38
PTCD3-214ENST00000483925 SLC7A3Q8WY07 619 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms