RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
UBR4-213ENST00000483922 CLRN2A0PK11 232 aa16.55■□□□□ 0.24
UBR4-213ENST00000483922 MANSC4A6NHS7 340 aaPredicted RBP16.55■□□□□ 0.24
UBR4-213ENST00000483922 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
UBR4-213ENST00000483922 DLGAP5Q15398 846 aa16.55■□□□□ 0.24
UBR4-213ENST00000483922 CCDC184Q52MB2 194 aa16.55■□□□□ 0.24
UBR4-213ENST00000483922 F8W031 263 aaPredicted RBP16.54■□□□□ 0.24
UBR4-213ENST00000483922 ALDH1A1P00352 501 aa16.54■□□□□ 0.24
UBR4-213ENST00000483922 INHBEP58166 350 aa16.54■□□□□ 0.24
UBR4-213ENST00000483922 FOXO4P98177 505 aa16.54■□□□□ 0.24
UBR4-213ENST00000483922 NEXNQ0ZGT2 675 aa16.54■□□□□ 0.24
UBR4-213ENST00000483922 C15orf52Q6ZUT6 534 aaKnown RBP16.54■□□□□ 0.24
UBR4-213ENST00000483922 JAG2Q9Y219 1238 aa16.54■□□□□ 0.24
UBR4-213ENST00000483922 PTPN22Q9Y2R2 807 aa16.54■□□□□ 0.24
UBR4-213ENST00000483922 TESPA1A2RU30 521 aaPredicted RBP16.53■□□□□ 0.24
UBR4-213ENST00000483922 SPDYE2BA6NHP3 402 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 SPDYE6P0CI01 402 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 ZBTB48P10074 688 aaPredicted RBP16.53■□□□□ 0.24
UBR4-213ENST00000483922 IL1R1P14778 569 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 CRHR2Q13324 411 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 HABP4Q5JVS0 413 aaKnown RBP16.53■□□□□ 0.24
UBR4-213ENST00000483922 CDAN1Q8IWY9 1227 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 CD99L2Q8TCZ2 262 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 MPHOSPH8Q99549 860 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 LAMB1P07942 1786 aa16.53■□□□□ 0.24
UBR4-213ENST00000483922 EN2P19622 333 aaPredicted RBP16.52■□□□□ 0.24
UBR4-213ENST00000483922 TWISTNBQ3B726 338 aaPredicted RBP16.52■□□□□ 0.24
UBR4-213ENST00000483922 EPHA10Q5JZY3 1008 aa16.52■□□□□ 0.24
UBR4-213ENST00000483922 COL1A1P02452 1464 aaPredicted RBP16.52■□□□□ 0.23
UBR4-213ENST00000483922 FLIIQ13045 1269 aa16.51■□□□□ 0.23
UBR4-213ENST00000483922 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
UBR4-213ENST00000483922 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
UBR4-213ENST00000483922 MS4A4AQ96JQ5 239 aa16.51■□□□□ 0.23
UBR4-213ENST00000483922 SZT2Q5T011 3432 aa16.5■□□□□ 0.23
UBR4-213ENST00000483922 PPP1R12BO60237 982 aaPredicted RBP16.5■□□□□ 0.23
UBR4-213ENST00000483922 RASA3Q14644 834 aa16.5■□□□□ 0.23
UBR4-213ENST00000483922 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
UBR4-213ENST00000483922 STK31Q9BXU1 1019 aa16.5■□□□□ 0.23
UBR4-213ENST00000483922 PPP2R3BQ9Y5P8 575 aa16.5■□□□□ 0.23
UBR4-213ENST00000483922 A0A1B0GUL6 1792 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 ANKRD18BA2A2Z9 1011 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 KCNJ4P48050 445 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 FKBP1AP62942 108 aaKnown RBP16.49■□□□□ 0.23
UBR4-213ENST00000483922 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
UBR4-213ENST00000483922 LINS1Q8NG48 757 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 DNAAF4Q8WXU2 420 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 ARMC5Q96C12 935 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 CHMP4AQ9BY43 222 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 VEZTQ9HBM0 779 aa16.49■□□□□ 0.23
UBR4-213ENST00000483922 UNCXA6NJT0 531 aa16.48■□□□□ 0.23
UBR4-213ENST00000483922 SUPT20HL1Q3ZLR7 823 aa16.48■□□□□ 0.23
UBR4-213ENST00000483922 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.48■□□□□ 0.23
UBR4-213ENST00000483922 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 F6X3S4 739 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 VAMP4O75379 141 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 SP3Q02447 781 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 GRIK5Q16478 980 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 ANKRD13AQ8IZ07 590 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 ERO1AQ96HE7 468 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 ELP3Q9H9T3 547 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
UBR4-213ENST00000483922 ZNF70Q9UC06 446 aaPredicted RBP16.47■□□□□ 0.23
UBR4-213ENST00000483922 PLIN1O60240 522 aa16.46■□□□□ 0.23
UBR4-213ENST00000483922 FKBP5Q13451 457 aaPredicted RBP16.46■□□□□ 0.23
UBR4-213ENST00000483922 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
UBR4-213ENST00000483922 BEND3Q5T5X7 828 aa16.46■□□□□ 0.23
UBR4-213ENST00000483922 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
UBR4-213ENST00000483922 TDRD7Q8NHU6 1098 aaKnown RBP16.46■□□□□ 0.23
UBR4-213ENST00000483922 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
UBR4-213ENST00000483922 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
UBR4-213ENST00000483922 OPTNQ96CV9 577 aa16.46■□□□□ 0.23
UBR4-213ENST00000483922 TDRD3Q9H7E2 651 aaKnown RBP16.46■□□□□ 0.23
UBR4-213ENST00000483922 RBBP6Q7Z6E9 1792 aaKnown RBP16.46■□□□□ 0.22
UBR4-213ENST00000483922 OTOFQ9HC10 1997 aa16.46■□□□□ 0.22
UBR4-213ENST00000483922 FAM205AQ6ZU69 1335 aa16.45■□□□□ 0.22
UBR4-213ENST00000483922 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
UBR4-213ENST00000483922 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.223e-6■■■□□ 17.4
UBR4-213ENST00000483922 IFIT5Q13325 482 aaKnown RBP16.45■□□□□ 0.22
UBR4-213ENST00000483922 ZNF804AQ7Z570 1209 aa16.45■□□□□ 0.22
UBR4-213ENST00000483922 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
UBR4-213ENST00000483922 ZNF333Q96JL9 665 aa16.45■□□□□ 0.22
UBR4-213ENST00000483922 FAM84BQ96KN1 310 aaPredicted RBP16.45■□□□□ 0.22
UBR4-213ENST00000483922 MYH16Q9H6N6 1097 aa16.45■□□□□ 0.22
UBR4-213ENST00000483922 KIAA0100Q14667 2235 aaKnown RBP16.45■□□□□ 0.22
UBR4-213ENST00000483922 GYG1P46976 350 aa16.44■□□□□ 0.22
UBR4-213ENST00000483922 RBM5P52756 815 aaKnown RBP eCLIP16.44■□□□□ 0.221e-7■■■□□ 15.1
UBR4-213ENST00000483922 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
UBR4-213ENST00000483922 MYO1BO43795 1136 aa16.43■□□□□ 0.22
UBR4-213ENST00000483922 VGLL4Q14135 290 aa16.43■□□□□ 0.22
UBR4-213ENST00000483922 LDHAL6AQ6ZMR3 332 aa16.43■□□□□ 0.22
UBR4-213ENST00000483922 KAZALD1Q96I82 304 aa16.43■□□□□ 0.22
UBR4-213ENST00000483922 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
UBR4-213ENST00000483922 PTCH2Q9Y6C5 1203 aa16.43■□□□□ 0.22
UBR4-213ENST00000483922 FANCIQ9NVI1 1328 aa16.43■□□□□ 0.22
UBR4-213ENST00000483922 TCP10L2B9ZVM9 353 aa16.42■□□□□ 0.22
UBR4-213ENST00000483922 OTUD7BQ6GQQ9 843 aa16.42■□□□□ 0.22
UBR4-213ENST00000483922 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms