RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 NLRP10Q86W26 655 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 DZIP3Q86Y13 1208 aaKnown RBP6.58□□□□□ -1.36
COL17A1-206ENST00000483876 NUTM1Q86Y26 1132 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 ARMC5Q96C12 935 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 EAF2Q96CJ1 260 aaPredicted RBP6.58□□□□□ -1.36
COL17A1-206ENST00000483876 EVI5LQ96CN4 794 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 BRIP1Q9BX63 1249 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 GBA2Q9HCG7 927 aaPredicted RBP6.58□□□□□ -1.36
COL17A1-206ENST00000483876 PGAP2Q9UHJ9 254 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
COL17A1-206ENST00000483876 ARFGEF2Q9Y6D5 1785 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 RPTORQ8N122 1335 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 EYA2O00167 538 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 HIP1O00291 1037 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 ATP5JP18859 108 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 ANAPC15P60006 121 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 HLFQ16534 295 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 ERICH6Q7L0X2 663 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 ATG9AQ7Z3C6 839 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 USP48Q86UV5 1035 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 AACSQ86V21 672 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.57□□□□□ -1.36
COL17A1-206ENST00000483876 RUFY2Q8WXA3 655 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 KIF2CQ99661 725 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 ESYT1Q9BSJ8 1104 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 SNRKQ9NRH2 765 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 PA2G4Q9UQ80 394 aaKnown RBP6.57□□□□□ -1.36
COL17A1-206ENST00000483876 AKAP2Q9Y2D5 859 aa6.57□□□□□ -1.36
COL17A1-206ENST00000483876 RBBP6Q7Z6E9 1792 aaKnown RBP6.57□□□□□ -1.36
COL17A1-206ENST00000483876 NRXN2Q9P2S2 1712 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 TRIM6-TRIM34B2RNG4 842 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 PDE8AO60658 829 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 CAMTA2O94983 1202 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 KCNA4P22459 653 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 RABEP1Q15276 862 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 CCDC57Q2TAC2 916 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 SLC4A8Q2Y0W8 1093 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 TNNI3KQ59H18 835 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 DLK2Q6UY11 383 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 OTOP1Q7RTM1 612 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 RTKN2Q8IZC4 609 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 TTLL11Q8NHH1 800 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 ZC3H15Q8WU90 426 aaKnown RBP6.56□□□□□ -1.36
COL17A1-206ENST00000483876 C7orf43Q8WVR3 580 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 GPRC5DQ9NZD1 345 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 ZNF652Q9Y2D9 606 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 PTPN22Q9Y2R2 807 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 NR2E3Q9Y5X4 410 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 FPGT-TNNI3KV9GXZ4 949 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 CEP290O15078 2479 aa6.56□□□□□ -1.36
COL17A1-206ENST00000483876 AKAP11Q9UKA4 1901 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 WTIPA6NIX2 430 aaPredicted RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 IRS4O14654 1257 aaPredicted RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 SRGNP10124 158 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 MCCP23508 829 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 TFCP2Q12800 502 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 IFIT5Q13325 482 aaKnown RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 SLC10A5Q5PT55 438 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 ALYREFQ86V81 257 aaKnown RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 RASAL3Q86YV0 1011 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 JARID2Q92833 1246 aaPredicted RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 RILPL2Q969X0 211 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 FAM89AQ96GI7 184 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 MASTLQ96GX5 879 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 ANP32EQ9BTT0 268 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 UTP14AQ9BVJ6 771 aaKnown RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 TBC1D2Q9BYX2 928 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 CEP126Q9P2H0 1117 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 NARFQ9UHQ1 456 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 TRMT112Q9UI30 125 aaKnown RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 TBC1D2BQ9UPU7 963 aa6.55□□□□□ -1.36
COL17A1-206ENST00000483876 ZNF330Q9Y3S2 320 aaPredicted RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 ARIH1Q9Y4X5 557 aaPredicted RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 AFDNP55196 1824 aaKnown RBP6.55□□□□□ -1.36
COL17A1-206ENST00000483876 SH3TC1Q8TE82 1336 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 LAMA3Q16787 3333 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 COL5A3P25940 1745 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-206ENST00000483876 TJP1Q07157 1748 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 ANKRD18BA2A2Z9 1011 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 SGSM2O43147 1006 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 MCM2P49736 904 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 CACNB1Q02641 598 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-206ENST00000483876 OLFM4Q6UX06 510 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 KLHDC4Q8TBB5 520 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 ZNF333Q96JL9 665 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 ZNF512BQ96KM6 892 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-206ENST00000483876 HAUS7Q99871 368 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 HTATIP2Q9BUP3 242 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 CCDC8Q9H0W5 538 aaPredicted RBP6.54□□□□□ -1.36
COL17A1-206ENST00000483876 SIL1Q9H173 461 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 BCL2L12Q9HB09 334 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 RIPOR2Q9Y4F9 1068 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 RFX7Q2KHR2 1363 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 RTL9Q8NET4 1388 aa6.54□□□□□ -1.36
COL17A1-206ENST00000483876 RAD50Q92878 1312 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 HSPA4P34932 840 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 HIRAP54198 1017 aaPredicted RBP6.53□□□□□ -1.36
COL17A1-206ENST00000483876 CTSWP56202 376 aa6.53□□□□□ -1.36
COL17A1-206ENST00000483876 SF3B3Q15393 1217 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms