RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 SURF6O75683 361 aaKnown RBP16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 OS9Q13438 667 aaPredicted RBP16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 CENPQQ7L2Z9 268 aaPredicted RBP16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 MINPP1Q9UNW1 487 aa16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 ZNF646O15015 1829 aaPredicted RBP16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 G3V3G9 751 aa16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 ATP2B4P23634 1241 aa16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 RSBN1LQ6PCB5 846 aaPredicted RBP16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 GMLQ99445 158 aa16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 GGA3Q9NZ52 723 aa16.53■□□□□ 0.24
ZKSCAN1-204ENST00000482979 HUNKP57058 714 aa16.52■□□□□ 0.23
ZKSCAN1-204ENST00000482979 ZNF280AP59817 542 aaPredicted RBP16.52■□□□□ 0.23
ZKSCAN1-204ENST00000482979 AGBL3Q8NEM8 1001 aa16.52■□□□□ 0.23
ZKSCAN1-204ENST00000482979 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.23
ZKSCAN1-204ENST00000482979 BEGAINQ9BUH8 593 aa16.52■□□□□ 0.23
ZKSCAN1-204ENST00000482979 BCL11AQ9H165 835 aa16.52■□□□□ 0.23
ZKSCAN1-204ENST00000482979 BSDC1Q9NW68 430 aaPredicted RBP16.52■□□□□ 0.23
ZKSCAN1-204ENST00000482979 G3BP1Q13283 466 aaKnown RBP eCLIP16.51■□□□□ 0.23
ZKSCAN1-204ENST00000482979 GCC1Q96CN9 775 aa16.51■□□□□ 0.23
ZKSCAN1-204ENST00000482979 DCTPP1Q9H773 170 aa16.51■□□□□ 0.23
ZKSCAN1-204ENST00000482979 GBA2Q9HCG7 927 aaPredicted RBP16.51■□□□□ 0.23
ZKSCAN1-204ENST00000482979 COPRSQ9NQ92 184 aa16.51■□□□□ 0.23
ZKSCAN1-204ENST00000482979 A0A1B0GUL6 1792 aa16.5■□□□□ 0.23
ZKSCAN1-204ENST00000482979 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
ZKSCAN1-204ENST00000482979 FAM155AB1AL88 458 aaPredicted RBP16.5■□□□□ 0.23
ZKSCAN1-204ENST00000482979 IGHMBP2P38935 993 aaKnown RBP16.5■□□□□ 0.23
ZKSCAN1-204ENST00000482979 PODNQ7Z5L7 613 aa16.5■□□□□ 0.23
ZKSCAN1-204ENST00000482979 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
ZKSCAN1-204ENST00000482979 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
ZKSCAN1-204ENST00000482979 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
ZKSCAN1-204ENST00000482979 USP17L3A6NCW0 530 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 USP17L4A6NCW7 530 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 SCARF1Q14162 830 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 LRRC24Q50LG9 513 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 ANGEL2Q5VTE6 544 aaKnown RBP16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 USP17L1Q7RTZ2 530 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 TXNRD3Q86VQ6 643 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 MXD3Q9BW11 206 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 CNNM1Q9NRU3 951 aa16.49■□□□□ 0.23
ZKSCAN1-204ENST00000482979 EYA2O00167 538 aa16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 KLRK1P26718 216 aa16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 RGMBQ6NW40 437 aa16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 LDHAL6AQ6ZMR3 332 aa16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 CDCA5Q96FF9 252 aa16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 MPHOSPH8Q99549 860 aa16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 MYOZ2Q9NPC6 264 aa16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 NOP58Q9Y2X3 529 aaKnown RBP16.48■□□□□ 0.23
ZKSCAN1-204ENST00000482979 SMARCA5O60264 1052 aaPredicted RBP16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 RAB11FIP3O75154 756 aa16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 USP17L8P0C7I0 530 aa16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 NOGQ13253 232 aa16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 DACT2Q5SW24 774 aa16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 C2orf69Q8N8R5 385 aa16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 SCAF8Q9UPN6 1271 aaKnown RBP16.47■□□□□ 0.23
ZKSCAN1-204ENST00000482979 CIAO1O76071 339 aa16.46■□□□□ 0.23
ZKSCAN1-204ENST00000482979 IL15P40933 162 aaPredicted RBP16.46■□□□□ 0.23
ZKSCAN1-204ENST00000482979 ATG9AQ7Z3C6 839 aa16.46■□□□□ 0.23
ZKSCAN1-204ENST00000482979 CASP8AP2Q9UKL3 1982 aa16.46■□□□□ 0.22
ZKSCAN1-204ENST00000482979 CA12O43570 354 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 RHPN1Q8TCX5 695 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 KIF1BPQ96EK5 621 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 LRRCC1Q9C099 1032 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 LEMD3Q9Y2U8 911 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 TFCP2Q12800 502 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 NBPF9Q3BBW0 867 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 LNPKQ9C0E8 428 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 COA1Q9GZY4 146 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
ZKSCAN1-204ENST00000482979 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 SNAP23O00161 211 aa16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 SASH1O94885 1247 aa16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 KIF23Q02241 960 aaPredicted RBP16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 NUCB1Q02818 461 aa16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 STRIP1Q5VSL9 837 aa16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 FBXW7Q969H0 707 aa16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 RIPOR2Q9Y4F9 1068 aa16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 PITPNM2Q9BZ72 1349 aa16.44■□□□□ 0.22
ZKSCAN1-204ENST00000482979 SLC10A3P09131 477 aa16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 CHRNDQ07001 517 aa16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 PRAMEF18Q5VWM3 479 aa16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 CHD1LQ86WJ1 897 aa16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 HELBQ8NG08 1087 aaPredicted RBP16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 CCDC102AQ96A19 550 aa16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 IRS2Q9Y4H2 1338 aa16.43■□□□□ 0.22
ZKSCAN1-204ENST00000482979 PAPPA2Q9BXP8 1791 aa16.42■□□□□ 0.22
ZKSCAN1-204ENST00000482979 MROH5Q6ZUA9 1318 aa16.42■□□□□ 0.22
ZKSCAN1-204ENST00000482979 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms