RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 CCDC24Q8N4L8 307 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 GJB4Q9NTQ9 266 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 A0A087WWV3 80 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 LEO1Q8WVC0 666 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 ISCA1Q9BUE6 129 aa14.06□□□□□ -0.16
RAPGEF3-210ENST00000482843 PHKA1P46020 1223 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 LUZP1Q86V48 1076 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 TTLL11Q8NHH1 800 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 PSEN1P49768 467 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 SETQ01105 290 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 CCDC73Q6ZRK6 1079 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 SDF4Q9BRK5 362 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 SEC31BQ9NQW1 1179 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 NIP7Q9Y221 180 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 LMO7Q8WWI1 1683 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 ATP2B1P20020 1258 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 CTSWP56202 376 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 VPS37DQ86XT2 251 aa14.05□□□□□ -0.16
RAPGEF3-210ENST00000482843 TRIM5Q9C035 493 aa14.04□□□□□ -0.16
RAPGEF3-210ENST00000482843 CFAP45Q9UL16 551 aa14.04□□□□□ -0.16
RAPGEF3-210ENST00000482843 NR1I2O75469 434 aa14.04□□□□□ -0.16
RAPGEF3-210ENST00000482843 MIGA1Q8NAN2 632 aa14.04□□□□□ -0.16
RAPGEF3-210ENST00000482843 INCENPQ9NQS7 918 aa14.04□□□□□ -0.16
RAPGEF3-210ENST00000482843 LRP2BPQ9P2M1 347 aa14.04□□□□□ -0.16
RAPGEF3-210ENST00000482843 ORC3Q9UBD5 711 aaPredicted RBP14.04□□□□□ -0.16
RAPGEF3-210ENST00000482843 IRF6O14896 467 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 MYL10Q9BUA6 226 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 DSCC1Q9BVC3 393 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 MCAMP43121 646 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 ANO6Q4KMQ2 910 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 KCNB2Q92953 911 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 C8orf76Q96K31 380 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 COL5A2P05997 1499 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 BECN2A8MW95 431 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 MCM5P33992 734 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 MMP14P50281 582 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 STK38Q15208 465 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 NKX1-1Q15270 411 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 SYNE3Q6ZMZ3 975 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 APPBP2Q92624 585 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 SLC4A9Q96Q91 983 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 DENND2AQ9ULE3 1009 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 ZKSCAN5Q9Y2L8 839 aa14.03□□□□□ -0.16
RAPGEF3-210ENST00000482843 GOLGA6L19H0YKK7 550 aa14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 RAD21O60216 631 aa14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 KINO60870 393 aaKnown RBP14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 CYP19A1P11511 503 aaPredicted RBP14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 TYRO3Q06418 890 aa14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 USPL1Q5W0Q7 1092 aa14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 MAGEB6Q8N7X4 407 aa14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 NCOA7Q8NI08 942 aa14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 ZKSCAN3Q9BRR0 538 aa14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 DNAJC25Q9H1X3 360 aa14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.02□□□□□ -0.16
RAPGEF3-210ENST00000482843 B4E1Z4 1266 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 CIAO1O76071 339 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 PDIA3P30101 505 aaKnown RBP14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 TDO2P48775 406 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 CCDC102BQ68D86 513 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 CCAR1Q8IX12 1150 aaKnown RBP14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 NSUN7Q8NE18 718 aaKnown RBP14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 ZNF532Q9HCE3 1301 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 MINDY4BA8MYZ0 360 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 HMGN5P82970 282 aaKnown RBP14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 SLC4A8Q2Y0W8 1093 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 FAM182BQ5T319 152 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 NAPBQ9H115 298 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 GPR108Q9NPR9 543 aa14.02□□□□□ -0.17
RAPGEF3-210ENST00000482843 DCCP43146 1447 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 KDM4FA0A1W2PPD8 638 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 PDE8AO60658 829 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 ZFYP08048 801 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 IGHMBP2P38935 993 aaKnown RBP14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 ISM2Q6H9L7 571 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 FAM13BQ9NYF5 915 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 ZSCAN25Q6NSZ9 544 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 IL17RAQ96F46 866 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 RAI14Q9P0K7 980 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 WWC3Q9ULE0 1092 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 NOL7Q9UMY1 257 aaKnown RBP14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 JAG2Q9Y219 1238 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 TCHHQ07283 1943 aa14.01□□□□□ -0.17
RAPGEF3-210ENST00000482843 PDE8BO95263 885 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 SMAP1Q8IYB5 467 aaPredicted RBP14□□□□□ -0.17
RAPGEF3-210ENST00000482843 FSIP1Q8NA03 581 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 USP28Q96RU2 1077 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 ARMT1Q9H993 441 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 PIH1D3Q9NQM4 214 aaKnown RBP14□□□□□ -0.17
RAPGEF3-210ENST00000482843 ZNF142P52746 1687 aaPredicted RBP14□□□□□ -0.17
RAPGEF3-210ENST00000482843 PFKFB2O60825 505 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
RAPGEF3-210ENST00000482843 TMEM87AQ8NBN3 555 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 ZNF396Q96N95 335 aaPredicted RBP14□□□□□ -0.17
RAPGEF3-210ENST00000482843 BIN1O00499 593 aa14□□□□□ -0.17
RAPGEF3-210ENST00000482843 DHX16O60231 1041 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms