RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 USP50Q70EL3 339 aaPredicted RBP20.62■□□□□ 0.89
SF1-215ENST00000482693 MICALL2Q8IY33 904 aa20.62■□□□□ 0.89
SF1-215ENST00000482693 DCTPP1Q9H773 170 aa20.62■□□□□ 0.89
SF1-215ENST00000482693 ADARB2Q9NS39 739 aaKnown RBP20.62■□□□□ 0.89
SF1-215ENST00000482693 SCN9AQ15858 1988 aa20.62■□□□□ 0.89
SF1-215ENST00000482693 SCN4AP35499 1836 aa20.62■□□□□ 0.89
SF1-215ENST00000482693 USP17L8P0C7I0 530 aa20.61■□□□□ 0.89
SF1-215ENST00000482693 MXD3Q9BW11 206 aa20.61■□□□□ 0.89
SF1-215ENST00000482693 IQSEC3Q9UPP2 1182 aaPredicted RBP20.61■□□□□ 0.89
SF1-215ENST00000482693 PHKA1P46020 1223 aa20.6■□□□□ 0.89
SF1-215ENST00000482693 ZNF280AP59817 542 aaPredicted RBP20.6■□□□□ 0.89
SF1-215ENST00000482693 OGFOD1Q8N543 542 aa20.6■□□□□ 0.89
SF1-215ENST00000482693 RBM46Q8TBY0 533 aaKnown RBP20.6■□□□□ 0.89
SF1-215ENST00000482693 TBC1D22AQ8WUA7 517 aa20.6■□□□□ 0.89
SF1-215ENST00000482693 APBB1O00213 710 aa20.59■□□□□ 0.89
SF1-215ENST00000482693 HDAC1Q13547 482 aaPredicted RBP20.59■□□□□ 0.89
SF1-215ENST00000482693 CLASRPQ8N2M8 674 aaKnown RBP20.59■□□□□ 0.89
SF1-215ENST00000482693 EAF2Q96CJ1 260 aaPredicted RBP20.59■□□□□ 0.89
SF1-215ENST00000482693 DENND2AQ9ULE3 1009 aa20.59■□□□□ 0.89
SF1-215ENST00000482693 CENPBP07199 599 aaPredicted RBP20.58■□□□□ 0.89
SF1-215ENST00000482693 CHAF1AQ13111 956 aaPredicted RBP20.58■□□□□ 0.89
SF1-215ENST00000482693 EAPPQ56P03 285 aaPredicted RBP20.58■□□□□ 0.89
SF1-215ENST00000482693 CCDC158Q5M9N0 1113 aa20.58■□□□□ 0.89
SF1-215ENST00000482693 MFSD14BQ5SR56 506 aa20.58■□□□□ 0.89
SF1-215ENST00000482693 LDHDQ86WU2 507 aa20.58■□□□□ 0.89
SF1-215ENST00000482693 CERS5Q8N5B7 392 aa20.58■□□□□ 0.89
SF1-215ENST00000482693 WDR66Q8TBY9 1149 aa20.58■□□□□ 0.89
SF1-215ENST00000482693 LRRCC1Q9C099 1032 aa20.58■□□□□ 0.89
SF1-215ENST00000482693 HDAC9Q9UKV0 1011 aa20.58■□□□□ 0.89
SF1-215ENST00000482693 JAG2Q9Y219 1238 aa20.58■□□□□ 0.89
SF1-215ENST00000482693 PSME4Q14997 1843 aa20.57■□□□□ 0.88
SF1-215ENST00000482693 SHTN1A0MZ66 631 aa20.57■□□□□ 0.88
SF1-215ENST00000482693 UQCRFS1P1P0C7P4 283 aa20.57■□□□□ 0.88
SF1-215ENST00000482693 IRX6P78412 446 aaPredicted RBP20.57■□□□□ 0.88
SF1-215ENST00000482693 AACSQ86V21 672 aa20.57■□□□□ 0.88
SF1-215ENST00000482693 DBNDD2Q9BQY9 259 aa20.57■□□□□ 0.88
SF1-215ENST00000482693 IL1RAPL2Q9NP60 686 aa20.57■□□□□ 0.88
SF1-215ENST00000482693 PDS5AQ29RF7 1337 aaKnown RBP20.56■□□□□ 0.88
SF1-215ENST00000482693 KIAA0825Q8IV33 1275 aa20.56■□□□□ 0.88
SF1-215ENST00000482693 SMC1BQ8NDV3 1235 aa20.56■□□□□ 0.88
SF1-215ENST00000482693 ZNF512BQ96KM6 892 aaPredicted RBP20.56■□□□□ 0.88
SF1-215ENST00000482693 CCDC8Q9H0W5 538 aaPredicted RBP20.56■□□□□ 0.88
SF1-215ENST00000482693 RWDD1Q9H446 243 aaPredicted RBP20.56■□□□□ 0.88
SF1-215ENST00000482693 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
SF1-215ENST00000482693 SUGT1Q9Y2Z0 365 aa20.56■□□□□ 0.88
SF1-215ENST00000482693 ARID4AP29374 1257 aaPredicted RBP20.55■□□□□ 0.88
SF1-215ENST00000482693 FSTL1Q12841 308 aa20.55■□□□□ 0.88
SF1-215ENST00000482693 RASGRF1Q13972 1273 aa20.55■□□□□ 0.88
SF1-215ENST00000482693 TBC1D10BQ4KMP7 808 aaPredicted RBP20.55■□□□□ 0.88
SF1-215ENST00000482693 TTC39AQ5SRH9 613 aa20.55■□□□□ 0.88
SF1-215ENST00000482693 CHADLQ6NUI6 762 aa20.55■□□□□ 0.88
SF1-215ENST00000482693 SAMD7Q7Z3H4 446 aa20.55■□□□□ 0.88
SF1-215ENST00000482693 ZC3H15Q8WU90 426 aaKnown RBP20.55■□□□□ 0.88
SF1-215ENST00000482693 MYOZ2Q9NPC6 264 aa20.55■□□□□ 0.88
SF1-215ENST00000482693 CLEC11AQ9Y240 323 aa20.55■□□□□ 0.88
SF1-215ENST00000482693 ARAP2Q8WZ64 1704 aa20.55■□□□□ 0.88
SF1-215ENST00000482693 IFIT2P09913 472 aaKnown RBP20.54■□□□□ 0.88
SF1-215ENST00000482693 POTEIP0CG38 1075 aa20.54■□□□□ 0.88
SF1-215ENST00000482693 POTEJP0CG39 1038 aa20.54■□□□□ 0.88
SF1-215ENST00000482693 HIRAP54198 1017 aaPredicted RBP20.54■□□□□ 0.88
SF1-215ENST00000482693 KIF4BQ2VIQ3 1234 aa20.54■□□□□ 0.88
SF1-215ENST00000482693 RBM26Q5T8P6 1007 aaKnown RBP20.54■□□□□ 0.88
SF1-215ENST00000482693 TRPM4Q8TD43 1214 aa20.54■□□□□ 0.88
SF1-215ENST00000482693 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
SF1-215ENST00000482693 ZGPATQ8N5A5 531 aaKnown RBP20.53■□□□□ 0.88
SF1-215ENST00000482693 SPATA5Q8NB90 893 aa20.53■□□□□ 0.88
SF1-215ENST00000482693 GCC1Q96CN9 775 aa20.53■□□□□ 0.88
SF1-215ENST00000482693 TLR7Q9NYK1 1049 aaKnown RBP20.53■□□□□ 0.88
SF1-215ENST00000482693 PGAP2Q9UHJ9 254 aa20.53■□□□□ 0.88
SF1-215ENST00000482693 F8W031 263 aaPredicted RBP20.52■□□□□ 0.88
SF1-215ENST00000482693 EGFRP00533 1210 aa20.52■□□□□ 0.88
SF1-215ENST00000482693 HMG20BQ9P0W2 317 aa20.52■□□□□ 0.88
SF1-215ENST00000482693 TTF2Q9UNY4 1162 aaKnown RBP20.52■□□□□ 0.88
SF1-215ENST00000482693 ZNF646O15015 1829 aaPredicted RBP20.52■□□□□ 0.88
SF1-215ENST00000482693 COL1A1P02452 1464 aaPredicted RBP20.51■□□□□ 0.87
SF1-215ENST00000482693 C1QTNF8P60827 252 aa20.51■□□□□ 0.87
SF1-215ENST00000482693 HDLBPQ00341 1268 aaKnown RBP20.51■□□□□ 0.87
SF1-215ENST00000482693 MTMR14Q8NCE2 650 aa20.51■□□□□ 0.87
SF1-215ENST00000482693 MRIQ9BWK5 157 aa20.51■□□□□ 0.87
SF1-215ENST00000482693 SERPINA10Q9UK55 444 aa20.51■□□□□ 0.87
SF1-215ENST00000482693 MAST3O60307 1309 aa20.51■□□□□ 0.87
SF1-215ENST00000482693 SMARCA5O60264 1052 aaPredicted RBP20.5■□□□□ 0.87
SF1-215ENST00000482693 MCAMP43121 646 aa20.5■□□□□ 0.87
SF1-215ENST00000482693 SCARF1Q14162 830 aa20.5■□□□□ 0.87
SF1-215ENST00000482693 DLGAP5Q15398 846 aa20.5■□□□□ 0.87
SF1-215ENST00000482693 SPTY2D1Q68D10 685 aaPredicted RBP20.5■□□□□ 0.87
SF1-215ENST00000482693 LDHBP07195 334 aaKnown RBP20.49■□□□□ 0.87
SF1-215ENST00000482693 GRIK5Q16478 980 aa20.49■□□□□ 0.87
SF1-215ENST00000482693 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
SF1-215ENST00000482693 ZBED3Q96IU2 234 aaPredicted RBP20.49■□□□□ 0.87
SF1-215ENST00000482693 BCL11AQ9H165 835 aa20.49■□□□□ 0.87
SF1-215ENST00000482693 ZBTB47Q9UFB7 747 aaPredicted RBP20.49■□□□□ 0.87
SF1-215ENST00000482693 MAP1SQ66K74 1059 aaPredicted RBP20.48■□□□□ 0.87
SF1-215ENST00000482693 ADAMTSL1Q8N6G6 1762 aa20.48■□□□□ 0.87
SF1-215ENST00000482693 WNT10BO00744 389 aa20.47■□□□□ 0.87
SF1-215ENST00000482693 IGHDP01880 384 aa20.47■□□□□ 0.87
SF1-215ENST00000482693 RBM5P52756 815 aaKnown RBP eCLIP20.47■□□□□ 0.87
SF1-215ENST00000482693 NBPF9Q3BBW0 867 aa20.47■□□□□ 0.87
SF1-215ENST00000482693 CFAP100Q494V2 611 aa20.47■□□□□ 0.87
SF1-215ENST00000482693 PI16Q6UXB8 463 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms