RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
CTDSP1-208ENST00000482272 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-208ENST00000482272 ALDH1L2Q3SY69 923 aa16.92■□□□□ 0.3
CTDSP1-208ENST00000482272 PRAMEF18Q5VWM3 479 aa16.92■□□□□ 0.3
CTDSP1-208ENST00000482272 APOBEC3FQ8IUX4 373 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-208ENST00000482272 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
CTDSP1-208ENST00000482272 MYO1BO43795 1136 aa16.91■□□□□ 0.3
CTDSP1-208ENST00000482272 SLC34A2O95436 690 aa16.91■□□□□ 0.3
CTDSP1-208ENST00000482272 RABL6Q3YEC7 729 aaPredicted RBP16.91■□□□□ 0.3
CTDSP1-208ENST00000482272 ABHD8Q96I13 439 aa16.91■□□□□ 0.3
CTDSP1-208ENST00000482272 ZBED3Q96IU2 234 aaPredicted RBP16.91■□□□□ 0.3
CTDSP1-208ENST00000482272 SAGE1Q9NXZ1 904 aa16.91■□□□□ 0.3
CTDSP1-208ENST00000482272 AOX1Q06278 1338 aa16.91■□□□□ 0.3
CTDSP1-208ENST00000482272 MROH5Q6ZUA9 1318 aa16.91■□□□□ 0.3
CTDSP1-208ENST00000482272 PAPPA2Q9BXP8 1791 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 CCER2I3L3R5 266 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 HIBADHP31937 336 aaKnown RBP16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 MOB2Q70IA6 237 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 MTMR14Q8NCE2 650 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 CSRNP1Q96S65 589 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 USP44Q9H0E7 712 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 JAG2Q9Y219 1238 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 RIPOR2Q9Y4F9 1068 aa16.9■□□□□ 0.3
CTDSP1-208ENST00000482272 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
CTDSP1-208ENST00000482272 ARMC9Q7Z3E5 817 aa16.89■□□□□ 0.29
CTDSP1-208ENST00000482272 RASAL3Q86YV0 1011 aa16.89■□□□□ 0.29
CTDSP1-208ENST00000482272 TDRD7Q8NHU6 1098 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-208ENST00000482272 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
CTDSP1-208ENST00000482272 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
CTDSP1-208ENST00000482272 TRPA1O75762 1119 aa16.88■□□□□ 0.29
CTDSP1-208ENST00000482272 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-208ENST00000482272 GYG1P46976 350 aa16.88■□□□□ 0.29
CTDSP1-208ENST00000482272 RBM5P52756 815 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■□□□ 13.1
CTDSP1-208ENST00000482272 CFAP100Q494V2 611 aa16.88■□□□□ 0.29
CTDSP1-208ENST00000482272 FAM84BQ96KN1 310 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-208ENST00000482272 SMC4Q9NTJ3 1288 aa16.88■□□□□ 0.29
CTDSP1-208ENST00000482272 CAVIN4Q5BKX8 364 aa16.87■□□□□ 0.29
CTDSP1-208ENST00000482272 METTL24Q5JXM2 366 aa16.87■□□□□ 0.29
CTDSP1-208ENST00000482272 VPS37DQ86XT2 251 aa16.87■□□□□ 0.29
CTDSP1-208ENST00000482272 PRMT6Q96LA8 375 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-208ENST00000482272 DEFB129Q9H1M3 183 aa16.87■□□□□ 0.29
CTDSP1-208ENST00000482272 FAM205AQ6ZU69 1335 aa16.87■□□□□ 0.29
CTDSP1-208ENST00000482272 PDE8BO95263 885 aa16.86■□□□□ 0.29
CTDSP1-208ENST00000482272 PRKG1Q13976 671 aa16.86■□□□□ 0.29
CTDSP1-208ENST00000482272 MFSD14BQ5SR56 506 aa16.86■□□□□ 0.29
CTDSP1-208ENST00000482272 VGLL2Q8N8G2 317 aa16.86■□□□□ 0.29
CTDSP1-208ENST00000482272 PPP2R3BQ9Y5P8 575 aa16.86■□□□□ 0.29
CTDSP1-208ENST00000482272 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
CTDSP1-208ENST00000482272 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 SPDYE2BA6NHP3 402 aa16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 FRAT2O75474 233 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 SPDYE6P0CI01 402 aa16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 RFX5P48382 616 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 DGKZQ13574 1117 aa16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 SUPT20HL1Q3ZLR7 823 aa16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 ANGEL1Q9UNK9 670 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 COL1A1P02452 1464 aaPredicted RBP16.85■□□□□ 0.29
CTDSP1-208ENST00000482272 CASP8AP2Q9UKL3 1982 aa16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 CCDC85CA6NKD9 419 aa16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 PPP1R12BO60237 982 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 PTPN12Q05209 780 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 GRIK5Q16478 980 aa16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 FBXO33Q7Z6M2 555 aa16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 MCOLN1Q9GZU1 580 aa16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 VEZTQ9HBM0 779 aa16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 NOB1Q9ULX3 412 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 FZD1Q9UP38 647 aa16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
CTDSP1-208ENST00000482272 CLRN2A0PK11 232 aa16.83■□□□□ 0.28
CTDSP1-208ENST00000482272 API5Q9BZZ5 524 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-208ENST00000482272 SERPINA10Q9UK55 444 aa16.83■□□□□ 0.28
CTDSP1-208ENST00000482272 TNNQ9UQP3 1299 aa16.83■□□□□ 0.28
CTDSP1-208ENST00000482272 IFIT1P09914 478 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-208ENST00000482272 TM4SF4P48230 202 aa16.82■□□□□ 0.28
CTDSP1-208ENST00000482272 RARSP54136 660 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-208ENST00000482272 TNFAIP1Q13829 316 aa16.82■□□□□ 0.28
CTDSP1-208ENST00000482272 LDLRAD1Q5T700 205 aa16.82■□□□□ 0.28
CTDSP1-208ENST00000482272 TBC1D22AQ8WUA7 517 aa16.82■□□□□ 0.28
CTDSP1-208ENST00000482272 SLC10A4Q96EP9 437 aa16.82■□□□□ 0.28
CTDSP1-208ENST00000482272 UNCXA6NJT0 531 aa16.81■□□□□ 0.28
CTDSP1-208ENST00000482272 EYA2O00167 538 aa16.81■□□□□ 0.28
CTDSP1-208ENST00000482272 UBTFL1P0CB47 393 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-208ENST00000482272 SREBF2Q12772 1141 aa16.81■□□□□ 0.28
CTDSP1-208ENST00000482272 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
CTDSP1-208ENST00000482272 MIER1Q8N108 512 aa16.81■□□□□ 0.28
CTDSP1-208ENST00000482272 IQSEC3Q9UPP2 1182 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-208ENST00000482272 OTOFQ9HC10 1997 aa16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 MYH13Q9UKX3 1938 aa16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 MKRN3Q13064 507 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 CHAF1AQ13111 956 aaPredicted RBP16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 RASA3Q14644 834 aa16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 PUM3Q15397 648 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 DZIP1LQ8IYY4 767 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 ZNF70Q9UC06 446 aaPredicted RBP16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 FBXO3Q9UK99 471 aa16.8■□□□□ 0.28
CTDSP1-208ENST00000482272 LAMB1P07942 1786 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms