RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TRPM7Q96QT4 1865 aa14.82□□□□□ -0.04
HMGN1-213ENST00000482192 WNT10BO00744 389 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 IFIT1P09914 478 aaKnown RBP14.81□□□□□ -0.04
HMGN1-213ENST00000482192 ECE1P42892 770 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 MTX1Q13505 466 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 NBPF9Q3BBW0 867 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 PAXIP1Q6ZW49 1069 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-213ENST00000482192 ATG9AQ7Z3C6 839 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 FBXO33Q7Z6M2 555 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 FTSJ3Q8IY81 847 aaKnown RBP14.81□□□□□ -0.04
HMGN1-213ENST00000482192 TMEM57Q8N5G2 664 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 HHIPL1Q96JK4 782 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 SIL1Q9H173 461 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 JAG2Q9Y219 1238 aa14.81□□□□□ -0.04
HMGN1-213ENST00000482192 SRGAP3O43295 1099 aa14.8□□□□□ -0.04
HMGN1-213ENST00000482192 GNAI2P04899 355 aa14.8□□□□□ -0.04
HMGN1-213ENST00000482192 FGFR2P21802 821 aa14.8□□□□□ -0.04
HMGN1-213ENST00000482192 IL15P40933 162 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-213ENST00000482192 DLK2Q6UY11 383 aa14.8□□□□□ -0.04
HMGN1-213ENST00000482192 LPIN2Q92539 896 aa14.8□□□□□ -0.04
HMGN1-213ENST00000482192 CDCA5Q96FF9 252 aa14.8□□□□□ -0.04
HMGN1-213ENST00000482192 COPRSQ9NQ92 184 aa14.8□□□□□ -0.04
HMGN1-213ENST00000482192 WDR33Q9C0J8 1336 aaKnown RBP14.8□□□□□ -0.04
HMGN1-213ENST00000482192 F8W031 263 aaPredicted RBP14.79□□□□□ -0.04
HMGN1-213ENST00000482192 HSPA1AP0DMV8 641 aaKnown RBP14.79□□□□□ -0.04
HMGN1-213ENST00000482192 HSPA1BP0DMV9 641 aaKnown RBP14.79□□□□□ -0.04
HMGN1-213ENST00000482192 SLC5A1P13866 664 aa14.79□□□□□ -0.04
HMGN1-213ENST00000482192 DLGAP5Q15398 846 aa14.79□□□□□ -0.04
HMGN1-213ENST00000482192 MFSD14BQ5SR56 506 aa14.79□□□□□ -0.04
HMGN1-213ENST00000482192 CAPNS2Q96L46 248 aa14.79□□□□□ -0.04
HMGN1-213ENST00000482192 CEP126Q9P2H0 1117 aa14.79□□□□□ -0.04
HMGN1-213ENST00000482192 FRAT2O75474 233 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-213ENST00000482192 BCAMP50895 628 aa14.78□□□□□ -0.04
HMGN1-213ENST00000482192 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
HMGN1-213ENST00000482192 C2orf69Q8N8R5 385 aa14.78□□□□□ -0.04
HMGN1-213ENST00000482192 MTMR14Q8NCE2 650 aa14.78□□□□□ -0.04
HMGN1-213ENST00000482192 ZBED3Q96IU2 234 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-213ENST00000482192 GBA2Q9HCG7 927 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-213ENST00000482192 PA2G4Q9UQ80 394 aaKnown RBP14.78□□□□□ -0.04
HMGN1-213ENST00000482192 THSD7BQ9C0I4 1608 aa14.77□□□□□ -0.04
HMGN1-213ENST00000482192 HUNKP57058 714 aa14.77□□□□□ -0.05
HMGN1-213ENST00000482192 GRM1Q13255 1194 aa14.77□□□□□ -0.05
HMGN1-213ENST00000482192 ATP2B3Q16720 1220 aa14.77□□□□□ -0.05
HMGN1-213ENST00000482192 CYP4F22Q6NT55 531 aa14.77□□□□□ -0.05
HMGN1-213ENST00000482192 APOBEC3FQ8IUX4 373 aaKnown RBP14.77□□□□□ -0.05
HMGN1-213ENST00000482192 ITPRIPQ8IWB1 547 aa14.77□□□□□ -0.05
HMGN1-213ENST00000482192 TBC1D22AQ8WUA7 517 aa14.77□□□□□ -0.05
HMGN1-213ENST00000482192 IQSEC3Q9UPP2 1182 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-213ENST00000482192 ARAP2Q8WZ64 1704 aa14.76□□□□□ -0.05
HMGN1-213ENST00000482192 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
HMGN1-213ENST00000482192 MYO1BO43795 1136 aa14.76□□□□□ -0.05
HMGN1-213ENST00000482192 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
HMGN1-213ENST00000482192 FKBP1BP68106 108 aa14.76□□□□□ -0.05
HMGN1-213ENST00000482192 CHAF1AQ13111 956 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-213ENST00000482192 CFAP100Q494V2 611 aa14.76□□□□□ -0.05
HMGN1-213ENST00000482192 TTF2Q9UNY4 1162 aaKnown RBP14.76□□□□□ -0.05
HMGN1-213ENST00000482192 RLBP1P12271 317 aa14.75□□□□□ -0.05
HMGN1-213ENST00000482192 MAP2K2P36507 400 aa14.75□□□□□ -0.05
HMGN1-213ENST00000482192 RBM5P52756 815 aaKnown RBP eCLIP14.75□□□□□ -0.05
HMGN1-213ENST00000482192 MAP2K1Q02750 393 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-213ENST00000482192 AIDAQ96BJ3 306 aa14.75□□□□□ -0.05
HMGN1-213ENST00000482192 SERPINA10Q9UK55 444 aa14.75□□□□□ -0.05
HMGN1-213ENST00000482192 SCAF8Q9UPN6 1271 aaKnown RBP14.75□□□□□ -0.05
HMGN1-213ENST00000482192 COL1A1P02452 1464 aaPredicted RBP14.75□□□□□ -0.05
HMGN1-213ENST00000482192 MS4A1P11836 297 aa14.74□□□□□ -0.05
HMGN1-213ENST00000482192 NF2P35240 595 aa14.74□□□□□ -0.05
HMGN1-213ENST00000482192 RGMBQ6NW40 437 aa14.74□□□□□ -0.05
HMGN1-213ENST00000482192 PRMT6Q96LA8 375 aaPredicted RBP14.74□□□□□ -0.05
HMGN1-213ENST00000482192 GNL3LQ9NVN8 582 aaKnown RBP14.74□□□□□ -0.05
HMGN1-213ENST00000482192 WBP1LQ9NX94 342 aa14.74□□□□□ -0.05
HMGN1-213ENST00000482192 PAPPA2Q9BXP8 1791 aa14.73□□□□□ -0.05
HMGN1-213ENST00000482192 PNMA6EA0A0J9YXQ4 647 aa14.73□□□□□ -0.05
HMGN1-213ENST00000482192 ZBTB7BO15156 539 aaPredicted RBP14.73□□□□□ -0.05
HMGN1-213ENST00000482192 NOGQ13253 232 aa14.73□□□□□ -0.05
HMGN1-213ENST00000482192 AKAP2Q9Y2D5 859 aa14.73□□□□□ -0.05
HMGN1-213ENST00000482192 SUGT1Q9Y2Z0 365 aa14.73□□□□□ -0.05
HMGN1-213ENST00000482192 PCDHAC2Q9Y5I4 1007 aa14.73□□□□□ -0.05
HMGN1-213ENST00000482192 PPP2R3BQ9Y5P8 575 aa14.73□□□□□ -0.05
HMGN1-213ENST00000482192 MAST3O60307 1309 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 CLRN2A0PK11 232 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 SEMA3EO15041 775 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 HDLBPQ00341 1268 aaKnown RBP14.72□□□□□ -0.05
HMGN1-213ENST00000482192 TFCP2Q12800 502 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 PRAMEF18Q5VWM3 479 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 WDR66Q8TBY9 1149 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 CCDC102AQ96A19 550 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 DEFB129Q9H1M3 183 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 RCAN3Q9UKA8 241 aa14.72□□□□□ -0.05
HMGN1-213ENST00000482192 POLR2AP24928 1970 aaKnown RBP14.71□□□□□ -0.05
HMGN1-213ENST00000482192 A0A1B0GUL7 405 aa14.71□□□□□ -0.05
HMGN1-213ENST00000482192 FOXN1O15353 648 aa14.71□□□□□ -0.05
HMGN1-213ENST00000482192 AOC2O75106 756 aa14.71□□□□□ -0.05
HMGN1-213ENST00000482192 CRKP46108 304 aa14.71□□□□□ -0.05
HMGN1-213ENST00000482192 ZNF157P51786 506 aaPredicted RBP14.71□□□□□ -0.05
HMGN1-213ENST00000482192 G3BP1Q13283 466 aaKnown RBP eCLIP14.71□□□□□ -0.05
HMGN1-213ENST00000482192 POLA2Q14181 598 aa14.71□□□□□ -0.05
HMGN1-213ENST00000482192 GRIK5Q16478 980 aa14.71□□□□□ -0.05
HMGN1-213ENST00000482192 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
HMGN1-213ENST00000482192 PANK1Q8TE04 598 aa14.71□□□□□ -0.05
HMGN1-213ENST00000482192 TEKT1Q969V4 418 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms