RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
TSPAN1-207ENST00000482143 VEZTQ9HBM0 779 aa16.54■□□□□ 0.24
TSPAN1-207ENST00000482143 LEMD3Q9Y2U8 911 aa16.54■□□□□ 0.24
TSPAN1-207ENST00000482143 SSC5DA1L4H1 1573 aa16.54■□□□□ 0.24
TSPAN1-207ENST00000482143 CEP290O15078 2479 aa16.54■□□□□ 0.24
TSPAN1-207ENST00000482143 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 IGKV5-2P06315 115 aa16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 CHRDL2Q6WN34 429 aa16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 ANKRD13AQ8IZ07 590 aa16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 GREM2Q9H772 168 aa16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 PTCH2Q9Y6C5 1203 aa16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 TRIOBPQ9H2D6 2365 aa16.53■□□□□ 0.24
TSPAN1-207ENST00000482143 ZNF804BA4D1E1 1349 aa16.52■□□□□ 0.24
TSPAN1-207ENST00000482143 F8W031 263 aaPredicted RBP16.52■□□□□ 0.24
TSPAN1-207ENST00000482143 DLL1O00548 723 aa16.52■□□□□ 0.24
TSPAN1-207ENST00000482143 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
TSPAN1-207ENST00000482143 CCDC30Q5VVM6 783 aa16.52■□□□□ 0.24
TSPAN1-207ENST00000482143 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
TSPAN1-207ENST00000482143 RBM5P52756 815 aaKnown RBP eCLIP16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 TAF1CQ15572 869 aaPredicted RBP16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 SLC17A8Q8NDX2 589 aa16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 OPTNQ96CV9 577 aa16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 ZBED3Q96IU2 234 aaPredicted RBP16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 ANKRD2Q9GZV1 360 aa16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 ELP3Q9H9T3 547 aa16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 ZFYVE28Q9HCC9 887 aa16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 MAP3K2Q9Y2U5 619 aa16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 SZT2Q5T011 3432 aa16.51■□□□□ 0.23
TSPAN1-207ENST00000482143 ZSWIM8A7E2V4 1837 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 KIF22Q14807 665 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 NBPF12Q5TAG4 269 aaPredicted RBP16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 DPF3Q92784 378 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 MPHOSPH8Q99549 860 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
TSPAN1-207ENST00000482143 KLRK1P26718 216 aa16.49■□□□□ 0.23
TSPAN1-207ENST00000482143 GJA5P36382 358 aa16.49■□□□□ 0.23
TSPAN1-207ENST00000482143 NEXNQ0ZGT2 675 aa16.49■□□□□ 0.23
TSPAN1-207ENST00000482143 CFAP100Q494V2 611 aa16.49■□□□□ 0.23
TSPAN1-207ENST00000482143 SH3TC2Q8TF17 1288 aa16.49■□□□□ 0.23
TSPAN1-207ENST00000482143 PTPN18Q99952 460 aa16.49■□□□□ 0.23
TSPAN1-207ENST00000482143 CCL15-CCL14A0A0B4J2E2 113 aa16.48■□□□□ 0.23
TSPAN1-207ENST00000482143 USP2O75604 605 aaPredicted RBP16.48■□□□□ 0.23
TSPAN1-207ENST00000482143 CCL15Q16663 113 aa16.48■□□□□ 0.23
TSPAN1-207ENST00000482143 CCDC184Q52MB2 194 aa16.48■□□□□ 0.23
TSPAN1-207ENST00000482143 MTMR14Q8NCE2 650 aa16.48■□□□□ 0.23
TSPAN1-207ENST00000482143 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
TSPAN1-207ENST00000482143 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
TSPAN1-207ENST00000482143 TESPA1A2RU30 521 aaPredicted RBP16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 CAP1Q01518 475 aa16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 TNFAIP1Q13829 316 aa16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 RASA3Q14644 834 aa16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 CWF19L2Q2TBE0 894 aaKnown RBP16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 CD209Q9NNX6 404 aa16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 PCDHAC2Q9Y5I4 1007 aa16.47■□□□□ 0.23
TSPAN1-207ENST00000482143 H7C1W4 665 aa16.46■□□□□ 0.23
TSPAN1-207ENST00000482143 GTF2A2P52657 109 aa16.46■□□□□ 0.23
TSPAN1-207ENST00000482143 CASP7P55210 303 aa16.46■□□□□ 0.23
TSPAN1-207ENST00000482143 G2E3Q7L622 706 aa16.46■□□□□ 0.23
TSPAN1-207ENST00000482143 WWC1Q8IX03 1113 aa16.46■□□□□ 0.23
TSPAN1-207ENST00000482143 PLA2G12BQ9BX93 195 aa16.46■□□□□ 0.23
TSPAN1-207ENST00000482143 ARAP2Q8WZ64 1704 aa16.45■□□□□ 0.22
TSPAN1-207ENST00000482143 ITGA6P23229 1130 aa16.45■□□□□ 0.22
TSPAN1-207ENST00000482143 UBE3BQ7Z3V4 1068 aa16.45■□□□□ 0.22
TSPAN1-207ENST00000482143 ZNF804AQ7Z570 1209 aa16.45■□□□□ 0.22
TSPAN1-207ENST00000482143 CERS5Q8N5B7 392 aa16.45■□□□□ 0.22
TSPAN1-207ENST00000482143 PRMT6Q96LA8 375 aaPredicted RBP16.45■□□□□ 0.22
TSPAN1-207ENST00000482143 CSADQ9Y600 493 aa16.45■□□□□ 0.22
TSPAN1-207ENST00000482143 IL16Q14005 1332 aa16.45■□□□□ 0.22
TSPAN1-207ENST00000482143 ECM2O94769 699 aaPredicted RBP16.44■□□□□ 0.22
TSPAN1-207ENST00000482143 TWISTNBQ3B726 338 aaPredicted RBP16.44■□□□□ 0.22
TSPAN1-207ENST00000482143 BRI3BPQ8WY22 251 aa16.44■□□□□ 0.22
TSPAN1-207ENST00000482143 HTATIP2Q9BUP3 242 aa16.44■□□□□ 0.22
TSPAN1-207ENST00000482143 JAG2Q9Y219 1238 aa16.44■□□□□ 0.22
TSPAN1-207ENST00000482143 CHRNDQ07001 517 aa16.43■□□□□ 0.22
TSPAN1-207ENST00000482143 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
TSPAN1-207ENST00000482143 MS4A4AQ96JQ5 239 aa16.43■□□□□ 0.22
TSPAN1-207ENST00000482143 A0A0C4DFX4 3053 aa16.43■□□□□ 0.22
TSPAN1-207ENST00000482143 IRS2Q9Y4H2 1338 aa16.43■□□□□ 0.22
TSPAN1-207ENST00000482143 GNRH1P01148 92 aa16.42■□□□□ 0.22
TSPAN1-207ENST00000482143 CSF1RP07333 972 aa16.42■□□□□ 0.22
TSPAN1-207ENST00000482143 GCKRQ14397 625 aa16.42■□□□□ 0.22
TSPAN1-207ENST00000482143 NKX2-3Q8TAU0 364 aa16.42■□□□□ 0.22
TSPAN1-207ENST00000482143 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
TSPAN1-207ENST00000482143 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
TSPAN1-207ENST00000482143 TAF5LO75529 589 aa16.41■□□□□ 0.22
TSPAN1-207ENST00000482143 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
TSPAN1-207ENST00000482143 TNNI2P48788 182 aa16.41■□□□□ 0.22
TSPAN1-207ENST00000482143 PRMT2P55345 433 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms