RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 NBPF10Q6P3W6 841 aaKnown RBP7.96□□□□□ -1.14
NCK1-208ENST00000482071 KSR2Q6VAB6 950 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 SH3BP5LQ7L8J4 393 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 SIRT2Q8IXJ6 389 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 TTC5Q8N0Z6 440 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 NBPF15Q8N660 670 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 TMOD3Q9NYL9 352 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 ASAP1Q9ULH1 1129 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 MAP4K5Q9Y4K4 846 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 AFF2P51816 1311 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 BRWD3Q6RI45 1802 aa7.96□□□□□ -1.14
NCK1-208ENST00000482071 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
NCK1-208ENST00000482071 F6X3S4 739 aa7.95□□□□□ -1.14
NCK1-208ENST00000482071 EIF2S2P20042 333 aaKnown RBP7.95□□□□□ -1.14
NCK1-208ENST00000482071 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
NCK1-208ENST00000482071 ITPRIPQ8IWB1 547 aa7.95□□□□□ -1.14
NCK1-208ENST00000482071 RPAP2Q8IXW5 612 aaPredicted RBP7.95□□□□□ -1.14
NCK1-208ENST00000482071 TRMT44Q8IYL2 757 aaKnown RBP7.95□□□□□ -1.14
NCK1-208ENST00000482071 ANKRD44Q8N8A2 993 aa7.95□□□□□ -1.14
NCK1-208ENST00000482071 ZSCAN1Q8NBB4 408 aa7.95□□□□□ -1.14
NCK1-208ENST00000482071 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
NCK1-208ENST00000482071 TSC1Q92574 1164 aa7.95□□□□□ -1.14
NCK1-208ENST00000482071 USP44Q9H0E7 712 aa7.95□□□□□ -1.14
NCK1-208ENST00000482071 TRPC5Q9UL62 973 aaPredicted RBP7.95□□□□□ -1.14
NCK1-208ENST00000482071 MYH14Q7Z406 1995 aaKnown RBP7.95□□□□□ -1.14
NCK1-208ENST00000482071 COL15A1P39059 1388 aa7.95□□□□□ -1.14
NCK1-208ENST00000482071 BTAF1O14981 1849 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 PI4KAP2A4QPH2 592 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 ALDH1L1O75891 902 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 CLK2P49760 499 aaKnown RBP7.94□□□□□ -1.14
NCK1-208ENST00000482071 FKBP5Q13451 457 aaPredicted RBP7.94□□□□□ -1.14
NCK1-208ENST00000482071 MEIOBQ8N635 442 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 PI4KAP1Q8N8J0 262 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 DNAAF4Q8WXU2 420 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 RWDD1Q9H446 243 aaPredicted RBP7.94□□□□□ -1.14
NCK1-208ENST00000482071 SLC24A3Q9HC58 644 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 ANKRD36CQ5JPF3 1778 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 TAF1LQ8IZX4 1826 aa7.94□□□□□ -1.14
NCK1-208ENST00000482071 ANXA1P04083 346 aa7.93□□□□□ -1.14
NCK1-208ENST00000482071 GNAI3P08754 354 aa7.93□□□□□ -1.14
NCK1-208ENST00000482071 CYP19A1P11511 503 aaPredicted RBP7.93□□□□□ -1.14
NCK1-208ENST00000482071 MTX1Q13505 466 aa7.93□□□□□ -1.14
NCK1-208ENST00000482071 LINS1Q8NG48 757 aa7.93□□□□□ -1.14
NCK1-208ENST00000482071 MEIS3Q99687 375 aa7.93□□□□□ -1.14
NCK1-208ENST00000482071 DCTPP1Q9H773 170 aa7.93□□□□□ -1.14
NCK1-208ENST00000482071 NUP98P52948 1817 aa7.93□□□□□ -1.14
NCK1-208ENST00000482071 AFDNP55196 1824 aaKnown RBP7.93□□□□□ -1.14
NCK1-208ENST00000482071 KAT6BQ8WYB5 2073 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 FAM181BA6NEQ2 426 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 DDX58O95786 925 aaKnown RBP7.92□□□□□ -1.14
NCK1-208ENST00000482071 A1BGP04217 495 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 IGKV5-2P06315 115 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 FSHRP23945 695 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 TRIM28Q13263 835 aaKnown RBP7.92□□□□□ -1.14
NCK1-208ENST00000482071 CEP85Q6P2H3 762 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 COPS6Q7L5N1 327 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 PLBD2Q8NHP8 589 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 GCC1Q96CN9 775 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 METTL22Q9BUU2 404 aaPredicted RBP7.92□□□□□ -1.14
NCK1-208ENST00000482071 SRCIN1Q9C0H9 1055 aa7.92□□□□□ -1.14
NCK1-208ENST00000482071 PTCD1O75127 700 aaKnown RBP7.91□□□□□ -1.14
NCK1-208ENST00000482071 CASP7P55210 303 aa7.91□□□□□ -1.14
NCK1-208ENST00000482071 ATP8B2P98198 1209 aa7.91□□□□□ -1.14
NCK1-208ENST00000482071 NUCB1Q02818 461 aa7.91□□□□□ -1.14
NCK1-208ENST00000482071 C6orf118Q5T5N4 469 aa7.91□□□□□ -1.14
NCK1-208ENST00000482071 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
NCK1-208ENST00000482071 XAGE3Q8WTP9 111 aa7.91□□□□□ -1.14
NCK1-208ENST00000482071 GPKOWQ92917 476 aaPredicted RBP eCLIP7.91□□□□□ -1.14
NCK1-208ENST00000482071 SMARCC1Q92922 1105 aaPredicted RBP7.91□□□□□ -1.14
NCK1-208ENST00000482071 KAZALD1Q96I82 304 aa7.91□□□□□ -1.14
NCK1-208ENST00000482071 QTRT2Q9H974 415 aaKnown RBP7.91□□□□□ -1.14
NCK1-208ENST00000482071 MAP3K2Q9Y2U5 619 aa7.91□□□□□ -1.14
NCK1-208ENST00000482071 NEURL1BA8MQ27 555 aa7.9□□□□□ -1.14
NCK1-208ENST00000482071 KCNQ2O43526 872 aa7.9□□□□□ -1.14
NCK1-208ENST00000482071 MAN1A2O60476 641 aa7.9□□□□□ -1.14
NCK1-208ENST00000482071 STARD3NLO95772 234 aa7.9□□□□□ -1.14
NCK1-208ENST00000482071 GNAI2P04899 355 aa7.9□□□□□ -1.14
NCK1-208ENST00000482071 IL6STP40189 918 aaPredicted RBP7.9□□□□□ -1.14
NCK1-208ENST00000482071 EIF5P55010 431 aaKnown RBP7.9□□□□□ -1.14
NCK1-208ENST00000482071 INTS5Q6P9B9 1019 aaKnown RBP7.9□□□□□ -1.14
NCK1-208ENST00000482071 SSH3Q8TE77 659 aa7.9□□□□□ -1.14
NCK1-208ENST00000482071 FBXO41Q8TF61 875 aa7.9□□□□□ -1.14
NCK1-208ENST00000482071 ISCA1Q9BUE6 129 aa7.9□□□□□ -1.14
NCK1-208ENST00000482071 CCDC9Q9Y3X0 531 aaKnown RBP7.9□□□□□ -1.14
NCK1-208ENST00000482071 BCORQ6W2J9 1755 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 PALLDQ8WX93 1383 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 ERVV-1B6SEH8 477 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 NBPF7P0C2Y1 421 aaPredicted RBP7.89□□□□□ -1.15
NCK1-208ENST00000482071 SIK1P57059 783 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 ITPK1Q13572 414 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 GCKRQ14397 625 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 MEX3CQ5U5Q3 659 aaKnown RBP7.89□□□□□ -1.15
NCK1-208ENST00000482071 ZNF772Q68DY9 489 aaPredicted RBP7.89□□□□□ -1.15
NCK1-208ENST00000482071 SLC4A10Q6U841 1118 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 TTLL7Q6ZT98 887 aa7.89□□□□□ -1.15
NCK1-208ENST00000482071 VASH1Q7L8A9 365 aaPredicted RBP7.89□□□□□ -1.15
NCK1-208ENST00000482071 SEPT12Q8IYM1 358 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms