RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ARID5AQ03989 594 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 TKFCQ3LXA3 575 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 CCDC181Q5TID7 509 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 PODNQ7Z5L7 613 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 BPHLQ86WA6 291 aaPredicted RBP4.52□□□□□ -1.69
SMC6-208ENST00000481708 CCDC146Q8IYE0 955 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 SBF1O95248 1867 aa4.52□□□□□ -1.69
SMC6-208ENST00000481708 PSME4Q14997 1843 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 PRKD2Q9BZL6 878 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 LAS1LQ9Y4W2 734 aaKnown RBP4.51□□□□□ -1.69
SMC6-208ENST00000481708 DOT1LQ8TEK3 1739 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 LRRC37AA6NMS7 1700 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 SF3B2Q13435 895 aaKnown RBP4.51□□□□□ -1.69
SMC6-208ENST00000481708 EML3Q32P44 896 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 MEI1Q5TIA1 1274 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 PI16Q6UXB8 463 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 JDP2Q8WYK2 163 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 SCN7AQ01118 1682 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 RNF223E7ERA6 249 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 SKOR1P84550 965 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 AGERQ15109 404 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 MAP7D1Q3KQU3 841 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 LILRB2Q8N423 598 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 MORC4Q8TE76 937 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 LRFN2Q9ULH4 789 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 CCNB3Q8WWL7 1395 aa4.51□□□□□ -1.69
SMC6-208ENST00000481708 LAMB2P55268 1798 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 CFAP65Q6ZU64 1925 aaKnown RBP4.5□□□□□ -1.69
SMC6-208ENST00000481708 ETFBP38117 255 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 SPTY2D1Q68D10 685 aaPredicted RBP4.5□□□□□ -1.69
SMC6-208ENST00000481708 C11orf96Q7Z7L8 435 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 JAMLQ86YT9 394 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 AFAP1Q8N556 730 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 MAF1Q9H063 256 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 DOLKQ9UPQ8 538 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 EIF1AXP47813 144 aaKnown RBP4.5□□□□□ -1.69
SMC6-208ENST00000481708 ENOX2Q16206 610 aaKnown RBP4.5□□□□□ -1.69
SMC6-208ENST00000481708 PLEKHG4Q58EX7 1191 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 OXLD1Q5BKU9 147 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 POLR3AO14802 1390 aaPredicted RBP4.5□□□□□ -1.69
SMC6-208ENST00000481708 LTBP1Q14766 1721 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 XPCQ01831 940 aaPredicted RBP4.5□□□□□ -1.69
SMC6-208ENST00000481708 FOXD4Q12950 439 aaPredicted RBP4.5□□□□□ -1.69
SMC6-208ENST00000481708 DALRD3Q5D0E6 543 aaKnown RBP4.5□□□□□ -1.69
SMC6-208ENST00000481708 USP48Q86UV5 1035 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 TMTC2Q8N394 836 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 SNTG2Q9NY99 539 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 TERF2IPQ9NYB0 399 aa4.5□□□□□ -1.69
SMC6-208ENST00000481708 SCTRP47872 440 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 ANAPC15P60006 121 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 TRIM32Q13049 653 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 PAK2Q13177 524 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 LRRC41Q15345 812 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 C4orf46Q504U0 113 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 TRMT44Q8IYL2 757 aaKnown RBP4.49□□□□□ -1.69
SMC6-208ENST00000481708 PNMA2Q9UL42 364 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 TIAM2Q8IVF5 1701 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 RGPD2P0DJD1 1756 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 KLF4O43474 513 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 ITGBL1O95965 494 aaPredicted RBP4.49□□□□□ -1.69
SMC6-208ENST00000481708 PTPN12Q05209 780 aaKnown RBP4.49□□□□□ -1.69
SMC6-208ENST00000481708 PSMD2Q13200 908 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 EMID1Q96A84 441 aaPredicted RBP4.49□□□□□ -1.69
SMC6-208ENST00000481708 SLC10A4Q96EP9 437 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 SSC5DA1L4H1 1573 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 ADCY9O60503 1353 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 OPLAHO14841 1288 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 ORC1Q13415 861 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 RALBP1Q15311 655 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMC6-208ENST00000481708 ALKBH8Q96BT7 664 aaKnown RBP4.49□□□□□ -1.69
SMC6-208ENST00000481708 MRS2Q9HD23 443 aa4.49□□□□□ -1.69
SMC6-208ENST00000481708 PNMA6FA0A0J9YX94 578 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 TSHZ1Q6ZSZ6 1077 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 CNTN3Q9P232 1028 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 V9GY48 417 aaPredicted RBP4.48□□□□□ -1.69
SMC6-208ENST00000481708 SCN11AQ9UI33 1791 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 SPAG9O60271 1321 aaKnown RBP4.48□□□□□ -1.69
SMC6-208ENST00000481708 EPHA4P54764 986 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMC6-208ENST00000481708 OSBPL7Q9BZF2 842 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 NOD1Q9Y239 953 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 CPDO75976 1380 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 ABCC11Q96J66 1382 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 A0A1B0GUL6 1792 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 F6X3S4 739 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 LTKP29376 864 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 SH3TC2Q8TF17 1288 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 CRELD1Q96HD1 420 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 HINFPQ9BQA5 517 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 NIF3L1Q9GZT8 377 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 PXDNLA1KZ92 1463 aa4.48□□□□□ -1.69
SMC6-208ENST00000481708 TMEM229AB2RXF0 380 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 BLMP54132 1417 aaPredicted RBP4.47□□□□□ -1.69
SMC6-208ENST00000481708 SQSTM1Q13501 440 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 NBPF20Q3BBV1 942 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 COX20Q5RI15 118 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 ODR4Q5SWX8 454 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 RPS6KC1Q96S38 1066 aa4.47□□□□□ -1.69
SMC6-208ENST00000481708 CYLDQ9NQC7 956 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms