RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 SMG9Q9H0W8 520 aaKnown RBP8.34□□□□□ -1.07
UPF3A-207ENST00000481131 ZNF576Q9H609 170 aa8.34□□□□□ -1.07
UPF3A-207ENST00000481131 TRIM33Q9UPN9 1127 aa8.34□□□□□ -1.07
UPF3A-207ENST00000481131 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.34□□□□□ -1.07
UPF3A-207ENST00000481131 ELOA3CA0A087WX78 387 aaPredicted RBP8.33□□□□□ -1.08
UPF3A-207ENST00000481131 ELOA3DA6NLF2 546 aaPredicted RBP8.33□□□□□ -1.08
UPF3A-207ENST00000481131 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
UPF3A-207ENST00000481131 CCDC85BQ15834 202 aaPredicted RBP8.33□□□□□ -1.08
UPF3A-207ENST00000481131 ELOA3BQ3SY89 546 aa8.33□□□□□ -1.08
UPF3A-207ENST00000481131 KANK3Q6NY19 840 aa8.33□□□□□ -1.08
UPF3A-207ENST00000481131 USP48Q86UV5 1035 aa8.33□□□□□ -1.08
UPF3A-207ENST00000481131 GALNT6Q8NCL4 622 aa8.33□□□□□ -1.08
UPF3A-207ENST00000481131 ELOA3Q8NG57 546 aa8.33□□□□□ -1.08
UPF3A-207ENST00000481131 SCARF2Q96GP6 870 aaPredicted RBP8.33□□□□□ -1.08
UPF3A-207ENST00000481131 TINF2Q9BSI4 451 aa8.33□□□□□ -1.08
UPF3A-207ENST00000481131 CCSER2Q9H7U1 834 aa8.33□□□□□ -1.08
UPF3A-207ENST00000481131 NSFL1CQ9UNZ2 370 aaKnown RBP8.33□□□□□ -1.08
UPF3A-207ENST00000481131 STARD13Q9Y3M8 1113 aa8.33□□□□□ -1.08
UPF3A-207ENST00000481131 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
UPF3A-207ENST00000481131 CELA3AP09093 270 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 TNNI2P48788 182 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 PSAPL1Q6NUJ1 521 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 ELMSAN1Q6PJG2 1045 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 SLCO4C1Q6ZQN7 724 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 RBSNQ9H1K0 784 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 SEC31BQ9NQW1 1179 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 KBTBD4Q9NVX7 518 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 SOX13Q9UN79 622 aa8.32□□□□□ -1.08
UPF3A-207ENST00000481131 F6X3S4 739 aa8.31□□□□□ -1.08
UPF3A-207ENST00000481131 VN1R5Q7Z5H4 357 aa8.31□□□□□ -1.08
UPF3A-207ENST00000481131 NEDD1Q8NHV4 660 aa8.31□□□□□ -1.08
UPF3A-207ENST00000481131 EDARADDQ8WWZ3 215 aa8.31□□□□□ -1.08
UPF3A-207ENST00000481131 BSNDQ8WZ55 320 aa8.31□□□□□ -1.08
UPF3A-207ENST00000481131 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
UPF3A-207ENST00000481131 ADAM19Q9H013 955 aa8.31□□□□□ -1.08
UPF3A-207ENST00000481131 ENC1O14682 589 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 EPXP11678 715 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 GRIK5Q16478 980 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 RPS26P11Q5JNZ5 115 aaPredicted RBP8.3□□□□□ -1.08
UPF3A-207ENST00000481131 SV2BQ7L1I2 683 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 ZNF654Q8IZM8 581 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 GOLGA6L1Q8N7Z2 621 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 RSRP1Q9BUV0 290 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 LACRTQ9GZZ8 138 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 LRRC4BQ9NT99 713 aa8.3□□□□□ -1.08
UPF3A-207ENST00000481131 PAGE1O75459 146 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 MAP3K11Q16584 847 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 ZNF423Q2M1K9 1284 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 C20orf204Q6ZNR8 217 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 MICALL1Q8N3F8 863 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 NUDT8Q8WV74 236 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 TTC9Q92623 222 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 ZFYVE1Q9HBF4 777 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 CAPN10Q9HC96 672 aa8.29□□□□□ -1.08
UPF3A-207ENST00000481131 SH2B1Q9NRF2 756 aaPredicted RBP8.29□□□□□ -1.08
UPF3A-207ENST00000481131 GDF2Q9UK05 429 aaPredicted RBP8.29□□□□□ -1.08
UPF3A-207ENST00000481131 ALBP02768 609 aa8.28□□□□□ -1.08
UPF3A-207ENST00000481131 PTPRAP18433 802 aa8.28□□□□□ -1.08
UPF3A-207ENST00000481131 CEP44Q9C0F1 390 aa8.28□□□□□ -1.08
UPF3A-207ENST00000481131 CLEC4MQ9H2X3 399 aaPredicted RBP8.28□□□□□ -1.08
UPF3A-207ENST00000481131 ENAMQ9NRM1 1142 aa8.28□□□□□ -1.08
UPF3A-207ENST00000481131 USP35Q9P2H5 1018 aa8.28□□□□□ -1.08
UPF3A-207ENST00000481131 B3GALT4O96024 378 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 IGHA1P01876 353 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 ITGB2P05107 769 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 EPHA1P21709 976 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 ZNF157P51786 506 aaPredicted RBP8.27□□□□□ -1.09
UPF3A-207ENST00000481131 PCDH1Q08174 1060 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 GDF6Q6KF10 455 aaPredicted RBP8.27□□□□□ -1.09
UPF3A-207ENST00000481131 SREK1Q8WXA9 508 aaKnown RBP8.27□□□□□ -1.09
UPF3A-207ENST00000481131 RHOVQ96L33 236 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 TMEM74Q96NL1 305 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 ADAMTS1Q9UHI8 967 aa8.27□□□□□ -1.09
UPF3A-207ENST00000481131 RGS9O75916 674 aaPredicted RBP8.26□□□□□ -1.09
UPF3A-207ENST00000481131 ALAS2P22557 587 aa8.26□□□□□ -1.09
UPF3A-207ENST00000481131 BAG6P46379 1132 aa8.26□□□□□ -1.09
UPF3A-207ENST00000481131 LIG3P49916 1009 aa8.26□□□□□ -1.09
UPF3A-207ENST00000481131 C8orf86Q6ZUL3 223 aa8.26□□□□□ -1.09
UPF3A-207ENST00000481131 PHC3Q8NDX5 983 aa8.26□□□□□ -1.09
UPF3A-207ENST00000481131 GPN3Q9UHW5 284 aaPredicted RBP8.26□□□□□ -1.09
UPF3A-207ENST00000481131 TLR6Q9Y2C9 796 aa8.26□□□□□ -1.09
UPF3A-207ENST00000481131 ESRRAP11474 423 aaPredicted RBP8.25□□□□□ -1.09
UPF3A-207ENST00000481131 CDC27P30260 824 aa8.25□□□□□ -1.09
UPF3A-207ENST00000481131 GBP2P32456 591 aaPredicted RBP8.25□□□□□ -1.09
UPF3A-207ENST00000481131 HGSNATQ68CP4 663 aa8.25□□□□□ -1.09
UPF3A-207ENST00000481131 GPAT2Q6NUI2 795 aa8.25□□□□□ -1.09
UPF3A-207ENST00000481131 SLC43A3Q8NBI5 491 aa8.25□□□□□ -1.09
UPF3A-207ENST00000481131 BTBD6Q96KE9 485 aa8.25□□□□□ -1.09
UPF3A-207ENST00000481131 JPH1Q9HDC5 661 aaPredicted RBP8.25□□□□□ -1.09
UPF3A-207ENST00000481131 TMEM39AQ9NV64 488 aa8.25□□□□□ -1.09
UPF3A-207ENST00000481131 INPP5FQ9Y2H2 1132 aa8.25□□□□□ -1.09
UPF3A-207ENST00000481131 MINDY4BA8MYZ0 360 aa8.24□□□□□ -1.09
UPF3A-207ENST00000481131 GARTP22102 1010 aa8.24□□□□□ -1.09
UPF3A-207ENST00000481131 AFF1P51825 1210 aaKnown RBP8.24□□□□□ -1.09
UPF3A-207ENST00000481131 PAK2Q13177 524 aa8.24□□□□□ -1.09
UPF3A-207ENST00000481131 PCNX4Q63HM2 1172 aa8.24□□□□□ -1.09
UPF3A-207ENST00000481131 TTBK2Q6IQ55 1244 aa8.24□□□□□ -1.09
UPF3A-207ENST00000481131 LINC00114Q6XXX2 140 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms