RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 GLTPD2A6NH11 291 aa15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 FRAT2O75474 233 aaPredicted RBP15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 GTF2IP78347 998 aa15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 DACT2Q5SW24 774 aa15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 GPC2Q8N158 579 aa15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 DENND2AQ9ULE3 1009 aa15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 IQSEC3Q9UPP2 1182 aaPredicted RBP15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
SHROOM3-205ENST00000481002 DDNO94850 711 aaPredicted RBP15.15■□□□□ 0.02
SHROOM3-205ENST00000481002 FKBP1AP62942 108 aaKnown RBP15.15■□□□□ 0.02
SHROOM3-205ENST00000481002 RASGRF1Q13972 1273 aa15.15■□□□□ 0.02
SHROOM3-205ENST00000481002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.15■□□□□ 0.02
SHROOM3-205ENST00000481002 LNPKQ9C0E8 428 aa15.15■□□□□ 0.02
SHROOM3-205ENST00000481002 BCL11AQ9H165 835 aa15.15■□□□□ 0.02
SHROOM3-205ENST00000481002 SALL3Q9BXA9 1300 aa15.15■□□□□ 0.02
SHROOM3-205ENST00000481002 ATP5JP18859 108 aa15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 MCAMP43121 646 aa15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 SCARF1Q14162 830 aa15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 RSBN1LQ6PCB5 846 aaPredicted RBP15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 WDR66Q8TBY9 1149 aa15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 GMLQ99445 158 aa15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 HMG20BQ9P0W2 317 aa15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 GJA3Q9Y6H8 435 aa15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 MYO5AQ9Y4I1 1855 aaKnown RBP15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 COL1A1P02452 1464 aaPredicted RBP15.14■□□□□ 0.01
SHROOM3-205ENST00000481002 SCN4AP35499 1836 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 RPS12P25398 132 aaKnown RBP15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 SPATA5Q8NB90 893 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 AGBL3Q8NEM8 1001 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 OTUD7AQ8TE49 926 aaPredicted RBP15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 DPF2Q92785 391 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 L3MBTL3Q96JM7 780 aaPredicted RBP15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 WDR90Q96KV7 1748 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 ECHDC1Q9NTX5 307 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 STAP2Q9UGK3 403 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 TTC41PQ6P2S7 1318 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 MYO3BQ8WXR4 1341 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 SALL1Q9NSC2 1324 aa15.13■□□□□ 0.01
SHROOM3-205ENST00000481002 MX1P20591 662 aa15.12■□□□□ 0.01
SHROOM3-205ENST00000481002 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
SHROOM3-205ENST00000481002 CERS5Q8N5B7 392 aa15.12■□□□□ 0.01
SHROOM3-205ENST00000481002 FBXW7Q969H0 707 aa15.12■□□□□ 0.01
SHROOM3-205ENST00000481002 GPATCH3Q96I76 525 aa15.12■□□□□ 0.01
SHROOM3-205ENST00000481002 MXD3Q9BW11 206 aa15.12■□□□□ 0.01
SHROOM3-205ENST00000481002 JAG2Q9Y219 1238 aa15.12■□□□□ 0.01
SHROOM3-205ENST00000481002 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
SHROOM3-205ENST00000481002 GMPSP49915 693 aaPredicted RBP15.11■□□□□ 0.01
SHROOM3-205ENST00000481002 PDE1AP54750 535 aa15.11■□□□□ 0.01
SHROOM3-205ENST00000481002 MFSD14BQ5SR56 506 aa15.11■□□□□ 0.01
SHROOM3-205ENST00000481002 PI16Q6UXB8 463 aa15.11■□□□□ 0.01
SHROOM3-205ENST00000481002 SNRKQ9NRH2 765 aa15.11■□□□□ 0.01
SHROOM3-205ENST00000481002 SUGT1Q9Y2Z0 365 aa15.11■□□□□ 0.01
SHROOM3-205ENST00000481002 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 PDE4AP27815 886 aa15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 ZAP70P43403 619 aa15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 MMP14P50281 582 aa15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 SCNN1DP51172 638 aa15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 PLEKHM2Q8IWE5 1019 aa15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 HAUS7Q99871 368 aa15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 OSBPL3Q9H4L5 887 aa15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 DOCK2Q92608 1830 aa15.1■□□□□ 0.01
SHROOM3-205ENST00000481002 POTECB2RU33 542 aa15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 ERC2O15083 957 aa15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 YY1P25490 414 aa15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 GRIK5Q16478 980 aa15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 PI4K2BQ8TCG2 481 aa15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 BOLA2Q9H3K6 86 aa15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 GPRC5DQ9NZD1 345 aa15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 CNOT7Q9UIV1 285 aaKnown RBP15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 AOX1Q06278 1338 aa15.09■□□□□ 0.01
SHROOM3-205ENST00000481002 MYH2Q9UKX2 1941 aa15.08■□□□□ 0
SHROOM3-205ENST00000481002 IGSF3O75054 1194 aa15.08■□□□□ 0
SHROOM3-205ENST00000481002 GLRX3O76003 335 aaKnown RBP15.08■□□□□ 0
SHROOM3-205ENST00000481002 ZNF280AP59817 542 aaPredicted RBP15.08■□□□□ 0
SHROOM3-205ENST00000481002 TSHZ3Q63HK5 1081 aa15.08■□□□□ 0
SHROOM3-205ENST00000481002 SPTY2D1Q68D10 685 aaPredicted RBP15.08■□□□□ 0
SHROOM3-205ENST00000481002 MRIQ9BWK5 157 aa15.08■□□□□ 0
SHROOM3-205ENST00000481002 MYH7P12883 1935 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 LDHBP07195 334 aaKnown RBP15.07■□□□□ 0
SHROOM3-205ENST00000481002 USP17L8P0C7I0 530 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
SHROOM3-205ENST00000481002 PRDX5P30044 214 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 EPS15P42566 896 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 TBC1D9Q6ZT07 1266 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 KIAA0825Q8IV33 1275 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 RRAGCQ9HB90 399 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 ABCF2Q9UG63 623 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 HACL1Q9UJ83 578 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 NDUFB9Q9Y6M9 179 aa15.07■□□□□ 0
SHROOM3-205ENST00000481002 SHTN1A0MZ66 631 aa15.06■□□□□ 0
SHROOM3-205ENST00000481002 IQCA1LA6NCM1 817 aa15.06■□□□□ 0
SHROOM3-205ENST00000481002 H7C1D1 291 aa15.06■□□□□ 0
SHROOM3-205ENST00000481002 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
SHROOM3-205ENST00000481002 HDLBPQ00341 1268 aaKnown RBP15.06■□□□□ 0
SHROOM3-205ENST00000481002 TTF1Q15361 905 aaPredicted RBP15.06■□□□□ 0
SHROOM3-205ENST00000481002 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
SHROOM3-205ENST00000481002 MICALL2Q8IY33 904 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms