RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.24
SNRNP200-204ENST00000480615 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.23
SNRNP200-204ENST00000480615 DACT2Q5SW24 774 aa16.52■□□□□ 0.23
SNRNP200-204ENST00000480615 PI16Q6UXB8 463 aa16.52■□□□□ 0.23
SNRNP200-204ENST00000480615 C16orf71Q8IYS4 520 aaPredicted RBP16.52■□□□□ 0.23
SNRNP200-204ENST00000480615 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.23
SNRNP200-204ENST00000480615 GTF3C3Q9Y5Q9 886 aa16.52■□□□□ 0.23
SNRNP200-204ENST00000480615 COL1A1P02452 1464 aaPredicted RBP16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 SHTN1A0MZ66 631 aa16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 F8W031 263 aaPredicted RBP16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 VIL1P09327 827 aaKnown RBP16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 SCARF1Q14162 830 aa16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 STRIP1Q5VSL9 837 aa16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 RSBN1LQ6PCB5 846 aaPredicted RBP16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 RRAGCQ9HB90 399 aa16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 GPBP1L1Q9HC44 474 aaPredicted RBP16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
SNRNP200-204ENST00000480615 MFSD14BQ5SR56 506 aa16.5■□□□□ 0.23
SNRNP200-204ENST00000480615 TSHZ3Q63HK5 1081 aa16.5■□□□□ 0.23
SNRNP200-204ENST00000480615 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
SNRNP200-204ENST00000480615 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
SNRNP200-204ENST00000480615 PPP4R2Q9NY27 417 aa16.5■□□□□ 0.23
SNRNP200-204ENST00000480615 SCNN1DP51172 638 aa16.49■□□□□ 0.23
SNRNP200-204ENST00000480615 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
SNRNP200-204ENST00000480615 CERS5Q8N5B7 392 aa16.49■□□□□ 0.23
SNRNP200-204ENST00000480615 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
SNRNP200-204ENST00000480615 NDUFB9Q9Y6M9 179 aa16.49■□□□□ 0.23
SNRNP200-204ENST00000480615 LMOD1P29536 600 aaPredicted RBP16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 EPS15P42566 896 aa16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 MCAMP43121 646 aa16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 DENND2AQ9ULE3 1009 aa16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 WDR90Q96KV7 1748 aa16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 UQCRFS1P1P0C7P4 283 aa16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 ARID4AP29374 1257 aaPredicted RBP16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 MICALL2Q8IY33 904 aa16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 SPATA5Q8NB90 893 aa16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 HMG20BQ9P0W2 317 aa16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 CNOT7Q9UIV1 285 aaKnown RBP16.48■□□□□ 0.23
SNRNP200-204ENST00000480615 FAM205AQ6ZU69 1335 aa16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 POTECB2RU33 542 aa16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 GRIK5Q16478 980 aa16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 RBM26Q5T8P6 1007 aaKnown RBP16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 TBC1D9Q6ZT07 1266 aa16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 L3MBTL3Q96JM7 780 aaPredicted RBP16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 GPRC5DQ9NZD1 345 aa16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 ABCF2Q9UG63 623 aa16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 AKAP11Q9UKA4 1901 aa16.47■□□□□ 0.23
SNRNP200-204ENST00000480615 NUCB1Q02818 461 aa16.46■□□□□ 0.23
SNRNP200-204ENST00000480615 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
SNRNP200-204ENST00000480615 AGBL3Q8NEM8 1001 aa16.46■□□□□ 0.23
SNRNP200-204ENST00000480615 HACL1Q9UJ83 578 aa16.46■□□□□ 0.23
SNRNP200-204ENST00000480615 SCN4AP35499 1836 aa16.46■□□□□ 0.22
SNRNP200-204ENST00000480615 SEMA3EO15041 775 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 USP17L8P0C7I0 530 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 VEGFAP15692 232 aaPredicted RBP16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 RPS12P25398 132 aaKnown RBP16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 ZAP70P43403 619 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 EAPPQ56P03 285 aaPredicted RBP16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 SAMD7Q7Z3H4 446 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 WDR66Q8TBY9 1149 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 GMLQ99445 158 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 BOLA2Q9H3K6 86 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 ADAMTSL1Q8N6G6 1762 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 MYO5AQ9Y4I1 1855 aaKnown RBP16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 IQCA1LA6NCM1 817 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 H7C1D1 291 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 EGFRP00533 1210 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 EPHX2P34913 555 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 TBC1D10BQ4KMP7 808 aaPredicted RBP16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 OGFOD1Q8N543 542 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 TBC1D22AQ8WUA7 517 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 DPF2Q92785 391 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 GPATCH3Q96I76 525 aa16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 TTF2Q9UNY4 1162 aaKnown RBP16.45■□□□□ 0.22
SNRNP200-204ENST00000480615 MYO3BQ8WXR4 1341 aa16.44■□□□□ 0.22
SNRNP200-204ENST00000480615 MX1P20591 662 aa16.44■□□□□ 0.22
SNRNP200-204ENST00000480615 PRDX5P30044 214 aa16.44■□□□□ 0.22
SNRNP200-204ENST00000480615 CENPQQ7L2Z9 268 aaPredicted RBP16.44■□□□□ 0.22
SNRNP200-204ENST00000480615 ECHDC1Q9NTX5 307 aa16.44■□□□□ 0.22
SNRNP200-204ENST00000480615 RBM5P52756 815 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNRNP200-204ENST00000480615 TRPM4Q8TD43 1214 aa16.43■□□□□ 0.22
SNRNP200-204ENST00000480615 EDC3Q96F86 508 aaKnown RBP16.43■□□□□ 0.22
SNRNP200-204ENST00000480615 TAF1DQ9H5J8 278 aaPredicted RBP16.43■□□□□ 0.22
SNRNP200-204ENST00000480615 MAP4K4O95819 1239 aaPredicted RBP16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 CYP2E1P05181 493 aaPredicted RBP16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 POTEIP0CG38 1075 aa16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 POTEJP0CG39 1038 aa16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 ZNF512BQ96KM6 892 aaPredicted RBP16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 ANTXR1Q9H6X2 564 aa16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 LRP2BPQ9P2M1 347 aa16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 PCDHAC2Q9Y5I4 1007 aa16.42■□□□□ 0.22
SNRNP200-204ENST00000480615 GOLIM4O00461 696 aa16.41■□□□□ 0.22
SNRNP200-204ENST00000480615 ATP5JP18859 108 aa16.41■□□□□ 0.22
SNRNP200-204ENST00000480615 FKBP1AP62942 108 aaKnown RBP16.41■□□□□ 0.22
SNRNP200-204ENST00000480615 SKAP1Q86WV1 359 aa16.41■□□□□ 0.22
SNRNP200-204ENST00000480615 MYOZ2Q9NPC6 264 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms