RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 Q6ZUG5 572 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 TADA2BQ86TJ2 420 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 RPAINQ86UA6 219 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 CEP112Q8N8E3 955 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 KCNG4Q8TDN1 519 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 DHX58Q96C10 678 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 ACBD3Q9H3P7 528 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 ANKZF1Q9H8Y5 726 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 FAN1Q9Y2M0 1017 aa12.27□□□□□ -0.45
SIK3-210ENST00000480468 SALL1Q9NSC2 1324 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 CUTAO60888 179 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 TAF5LO75529 589 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 YEATS4O95619 227 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 LMOD1P29536 600 aaPredicted RBP12.26□□□□□ -0.45
SIK3-210ENST00000480468 TBX2Q13207 712 aaPredicted RBP12.26□□□□□ -0.45
SIK3-210ENST00000480468 MLECQ14165 292 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 ERCC4Q92889 916 aaPredicted RBP12.26□□□□□ -0.45
SIK3-210ENST00000480468 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.456e-7■□□□□ 9.2
SIK3-210ENST00000480468 TOMM22Q9NS69 142 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 CCDC172P0C7W6 258 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 HSP90B1P14625 803 aaKnown RBP12.26□□□□□ -0.45
SIK3-210ENST00000480468 MYL5Q02045 173 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 MCM6Q14566 821 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 HSP90B2PQ58FF3 399 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 DNAJC21Q5F1R6 531 aaKnown RBP12.26□□□□□ -0.45
SIK3-210ENST00000480468 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 ILDR1Q86SU0 546 aaPredicted RBP12.26□□□□□ -0.45
SIK3-210ENST00000480468 FBXW7Q969H0 707 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
SIK3-210ENST00000480468 BAG1Q99933 345 aaPredicted RBP12.26□□□□□ -0.45
SIK3-210ENST00000480468 RFX7Q2KHR2 1363 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 A0A1B0GVL5 298 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
SIK3-210ENST00000480468 ATP1A3P13637 1013 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 AACSQ86V21 672 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 LINC00301Q8NCQ3 95 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 TUBE1Q9UJT0 475 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 CEP83Q9Y592 693 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 PTPDC1A2A3K4 754 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 KIF1CO43896 1103 aaKnown RBP12.25□□□□□ -0.45
SIK3-210ENST00000480468 SERPINC1P01008 464 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 CFAP100Q494V2 611 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 DNAAF4Q8WXU2 420 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 FSD1Q9BTV5 496 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 POLR3EQ9NVU0 708 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 CDC23Q9UJX2 597 aa12.25□□□□□ -0.45
SIK3-210ENST00000480468 U3KPZ7 1027 aaPredicted RBP12.25□□□□□ -0.45
SIK3-210ENST00000480468 FMN2Q9NZ56 1722 aa12.24□□□□□ -0.45
SIK3-210ENST00000480468 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
SIK3-210ENST00000480468 CTDNEP1O95476 244 aa12.24□□□□□ -0.45
SIK3-210ENST00000480468 CNNM3Q8NE01 707 aa12.24□□□□□ -0.45
SIK3-210ENST00000480468 NECTIN2Q92692 538 aa12.24□□□□□ -0.45
SIK3-210ENST00000480468 DPF2Q92785 391 aa12.24□□□□□ -0.45
SIK3-210ENST00000480468 CXorf56Q9H5V9 222 aa12.24□□□□□ -0.45
SIK3-210ENST00000480468 VIPAS39Q9H9C1 493 aa12.24□□□□□ -0.45
SIK3-210ENST00000480468 DONSONQ9NYP3 566 aa12.24□□□□□ -0.45
SIK3-210ENST00000480468 RIMS1Q86UR5 1692 aaKnown RBP12.24□□□□□ -0.45
SIK3-210ENST00000480468 ZNF202O95125 648 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 AARSP49588 968 aaKnown RBP eCLIP12.23□□□□□ -0.45
SIK3-210ENST00000480468 CASP8Q14790 479 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
SIK3-210ENST00000480468 FAM177A1Q8N128 213 aaPredicted RBP12.23□□□□□ -0.45
SIK3-210ENST00000480468 CCDC12Q8WUD4 166 aaPredicted RBP12.23□□□□□ -0.45
SIK3-210ENST00000480468 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 PHAXQ9H814 394 aaKnown RBP12.23□□□□□ -0.45
SIK3-210ENST00000480468 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 CCDC196A0A1B0GTZ2 297 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 N4BP1O75113 896 aaKnown RBP12.23□□□□□ -0.45
SIK3-210ENST00000480468 HOXB7P09629 217 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 CMA1P23946 247 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 USP8P40818 1118 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 STK38Q15208 465 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 PNKPQ96T60 521 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 ABCB6Q9NP58 842 aa12.23□□□□□ -0.45
SIK3-210ENST00000480468 SART3Q15020 963 aaKnown RBP12.22□□□□□ -0.45
SIK3-210ENST00000480468 SF3A1Q15459 793 aaKnown RBP12.22□□□□□ -0.45
SIK3-210ENST00000480468 TAF7Q15545 349 aaPredicted RBP12.22□□□□□ -0.45
SIK3-210ENST00000480468 CT47A1Q5JQC4 288 aaPredicted RBP12.22□□□□□ -0.45
SIK3-210ENST00000480468 TOGARAM2Q6ZUX3 1019 aa12.22□□□□□ -0.45
SIK3-210ENST00000480468 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
SIK3-210ENST00000480468 DIP2CQ9Y2E4 1556 aa12.22□□□□□ -0.45
SIK3-210ENST00000480468 BIN1O00499 593 aa12.22□□□□□ -0.45
SIK3-210ENST00000480468 SPTLC2O15270 562 aa12.22□□□□□ -0.45
SIK3-210ENST00000480468 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
SIK3-210ENST00000480468 GPATCH11Q8N954 259 aa12.22□□□□□ -0.45
SIK3-210ENST00000480468 TC2NQ8N9U0 490 aa12.22□□□□□ -0.45
SIK3-210ENST00000480468 TACO1Q9BSH4 297 aaKnown RBP12.22□□□□□ -0.45
SIK3-210ENST00000480468 SENP3Q9H4L4 574 aaPredicted RBP12.22□□□□□ -0.45
SIK3-210ENST00000480468 AGLP35573 1532 aa12.22□□□□□ -0.45
SIK3-210ENST00000480468 TSPOAP1O95153 1857 aa12.21□□□□□ -0.45
SIK3-210ENST00000480468 APPP05067 770 aa12.21□□□□□ -0.45
SIK3-210ENST00000480468 CCDC175P0C221 793 aa12.21□□□□□ -0.45
SIK3-210ENST00000480468 ATP6V1AP38606 617 aa12.21□□□□□ -0.45
SIK3-210ENST00000480468 DHX32Q7L7V1 743 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms