RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 PPP4R2Q9NY27 417 aa10.1□□□□□ -0.79
USP54-212ENST00000480210 WDR90Q96KV7 1748 aa10.1□□□□□ -0.79
USP54-212ENST00000480210 TTC41PQ6P2S7 1318 aa10.09□□□□□ -0.79
USP54-212ENST00000480210 IQCA1LA6NCM1 817 aa10.09□□□□□ -0.79
USP54-212ENST00000480210 WTIPA6NIX2 430 aaPredicted RBP10.09□□□□□ -0.79
USP54-212ENST00000480210 ERC2O15083 957 aa10.09□□□□□ -0.79
USP54-212ENST00000480210 SPTY2D1Q68D10 685 aaPredicted RBP10.09□□□□□ -0.79
USP54-212ENST00000480210 RSBN1LQ6PCB5 846 aaPredicted RBP10.09□□□□□ -0.79
USP54-212ENST00000480210 SLC51AQ86UW1 340 aa10.09□□□□□ -0.79
USP54-212ENST00000480210 L3MBTL3Q96JM7 780 aaPredicted RBP10.09□□□□□ -0.79
USP54-212ENST00000480210 CCDC136Q96JN2 1154 aa10.09□□□□□ -0.79
USP54-212ENST00000480210 GPR101Q96P66 508 aaPredicted RBP10.09□□□□□ -0.79
USP54-212ENST00000480210 MRIQ9BWK5 157 aa10.09□□□□□ -0.79
USP54-212ENST00000480210 CCDC8Q9H0W5 538 aaPredicted RBP10.09□□□□□ -0.79
USP54-212ENST00000480210 HDAC9Q9UKV0 1011 aa10.09□□□□□ -0.79
USP54-212ENST00000480210 MAST3O60307 1309 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 SALL1Q9NSC2 1324 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 H7C1D1 291 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 APBB1O00213 710 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 PSMD14O00487 310 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 YY1P25490 414 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 KLRK1P26718 216 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
USP54-212ENST00000480210 PHKA1P46020 1223 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 GTF2IP78347 998 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 NUCB1Q02818 461 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 TTF1Q15361 905 aaPredicted RBP10.08□□□□□ -0.8
USP54-212ENST00000480210 DACT2Q5SW24 774 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 TICAM2Q86XR7 235 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 OGFOD1Q8N543 542 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 DBNDD2Q9BQY9 259 aa10.08□□□□□ -0.8
USP54-212ENST00000480210 DBNLQ9UJU6 430 aaKnown RBP10.08□□□□□ -0.8
USP54-212ENST00000480210 ZNF646O15015 1829 aaPredicted RBP10.07□□□□□ -0.8
USP54-212ENST00000480210 COL4A5P29400 1685 aa10.07□□□□□ -0.8
USP54-212ENST00000480210 RAD17O75943 681 aa10.07□□□□□ -0.8
USP54-212ENST00000480210 DDNO94850 711 aaPredicted RBP10.07□□□□□ -0.8
USP54-212ENST00000480210 VEGFAP15692 232 aaPredicted RBP10.07□□□□□ -0.8
USP54-212ENST00000480210 ATP5JP18859 108 aa10.07□□□□□ -0.8
USP54-212ENST00000480210 ADORA1P30542 326 aa10.07□□□□□ -0.8
USP54-212ENST00000480210 HDLBPQ00341 1268 aaKnown RBP10.07□□□□□ -0.8
USP54-212ENST00000480210 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
USP54-212ENST00000480210 ECHDC1Q9NTX5 307 aa10.07□□□□□ -0.8
USP54-212ENST00000480210 GJA3Q9Y6H8 435 aa10.07□□□□□ -0.8
USP54-212ENST00000480210 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.07□□□□□ -0.8
USP54-212ENST00000480210 AOX1Q06278 1338 aa10.07□□□□□ -0.8
USP54-212ENST00000480210 MYH7P12883 1935 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 MYH2Q9UKX2 1941 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 SMARCA5O60264 1052 aaPredicted RBP10.06□□□□□ -0.8
USP54-212ENST00000480210 GLRX3O76003 335 aaKnown RBP10.06□□□□□ -0.8
USP54-212ENST00000480210 LRRFIP1Q32MZ4 808 aaKnown RBP10.06□□□□□ -0.8
USP54-212ENST00000480210 MFSD14BQ5SR56 506 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 PNMA8AQ86V59 439 aaPredicted RBP10.06□□□□□ -0.8
USP54-212ENST00000480210 SPATA5Q8NB90 893 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 FBXW7Q969H0 707 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 GMLQ99445 158 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 OSBPL3Q9H4L5 887 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 STAP2Q9UGK3 403 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 HACL1Q9UJ83 578 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 GOLGB1Q14789 3259 aaKnown RBP10.06□□□□□ -0.8
USP54-212ENST00000480210 ZNF541Q9H0D2 1346 aa10.06□□□□□ -0.8
USP54-212ENST00000480210 POLR2AP24928 1970 aaKnown RBP10.05□□□□□ -0.8
USP54-212ENST00000480210 LDHCP07864 332 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 USP17L8P0C7I0 530 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 MX1P20591 662 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 CHAF1AQ13111 956 aaPredicted RBP10.05□□□□□ -0.8
USP54-212ENST00000480210 RASGRF1Q13972 1273 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 USP50Q70EL3 339 aaPredicted RBP10.05□□□□□ -0.8
USP54-212ENST00000480210 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
USP54-212ENST00000480210 KCNQ5Q9NR82 932 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 ADARB2Q9NS39 739 aaKnown RBP10.05□□□□□ -0.8
USP54-212ENST00000480210 GPRC5DQ9NZD1 345 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 HMG20BQ9P0W2 317 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 CNOT7Q9UIV1 285 aaKnown RBP10.05□□□□□ -0.8
USP54-212ENST00000480210 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 ECM29Q5VYK3 1845 aa10.05□□□□□ -0.8
USP54-212ENST00000480210 MYO5AQ9Y4I1 1855 aaKnown RBP10.04□□□□□ -0.8
USP54-212ENST00000480210 MAP4K4O95819 1239 aaPredicted RBP10.04□□□□□ -0.8
USP54-212ENST00000480210 LDHBP07195 334 aaKnown RBP10.04□□□□□ -0.8
USP54-212ENST00000480210 MCAMP43121 646 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 GMPSP49915 693 aaPredicted RBP10.04□□□□□ -0.8
USP54-212ENST00000480210 ZNF280AP59817 542 aaPredicted RBP10.04□□□□□ -0.8
USP54-212ENST00000480210 GSTO1P78417 241 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 B4GALNT3Q6L9W6 998 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 HHIPL2Q6UWX4 724 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 CERS3Q8IU89 383 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 MTMR14Q8NCE2 650 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 ZC3H15Q8WU90 426 aaKnown RBP10.04□□□□□ -0.8
USP54-212ENST00000480210 HAUS7Q99871 368 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 LNPKQ9C0E8 428 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
USP54-212ENST00000480210 IQSEC3Q9UPP2 1182 aaPredicted RBP10.04□□□□□ -0.8
USP54-212ENST00000480210 DOCK2Q92608 1830 aa10.03□□□□□ -0.8
USP54-212ENST00000480210 EPHX2P34913 555 aa10.03□□□□□ -0.8
USP54-212ENST00000480210 SCNN1DP51172 638 aa10.03□□□□□ -0.8
USP54-212ENST00000480210 PDE1AP54750 535 aa10.03□□□□□ -0.8
USP54-212ENST00000480210 MAP3K12Q12852 859 aa10.03□□□□□ -0.8
USP54-212ENST00000480210 ZSCAN25Q6NSZ9 544 aa10.03□□□□□ -0.8
USP54-212ENST00000480210 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
USP54-212ENST00000480210 RRAGCQ9HB90 399 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms