RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ECE2O60344 883 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 IGSF3O75054 1194 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 LMNB1P20700 586 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 RGS3P49796 1198 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 PRELPP51888 382 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 SCARF1Q14162 830 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 GPR162Q16538 588 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 ARHGAP27Q6ZUM4 889 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 LARGE2Q8N3Y3 721 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 SPATA5Q8NB90 893 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 BCL11AQ9H165 835 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 HMG20BQ9P0W2 317 aa15.29■□□□□ 0.04
TRAPPC12-218ENST00000479897 GSPT1P15170 499 aaKnown RBP15.28■□□□□ 0.04
TRAPPC12-218ENST00000479897 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
TRAPPC12-218ENST00000479897 NIM1KQ8IY84 436 aa15.28■□□□□ 0.04
TRAPPC12-218ENST00000479897 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
TRAPPC12-218ENST00000479897 DBNDD1Q9H9R9 158 aa15.28■□□□□ 0.04
TRAPPC12-218ENST00000479897 FKBP1AP62942 108 aaKnown RBP15.27■□□□□ 0.04
TRAPPC12-218ENST00000479897 DOK7Q18PE1 504 aa15.27■□□□□ 0.04
TRAPPC12-218ENST00000479897 TICAM2Q86XR7 235 aa15.27■□□□□ 0.04
TRAPPC12-218ENST00000479897 JDP2Q8WYK2 163 aa15.27■□□□□ 0.04
TRAPPC12-218ENST00000479897 BOLA2Q9H3K6 86 aa15.27■□□□□ 0.04
TRAPPC12-218ENST00000479897 ZC3H4Q9UPT8 1303 aaKnown RBP15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 YDJCA8MPS7 323 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 G3V3G9 751 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 ZAP70P43403 619 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 TTF1Q15361 905 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 STRIP1Q5VSL9 837 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 PI16Q6UXB8 463 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 WDR66Q8TBY9 1149 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 TBC1D22AQ8WUA7 517 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 PAG1Q9NWQ8 432 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 ZNRF3Q9ULT6 936 aa15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 IQSEC3Q9UPP2 1182 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC12-218ENST00000479897 FZD9O00144 591 aa15.25■□□□□ 0.03
TRAPPC12-218ENST00000479897 FRAT2O75474 233 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC12-218ENST00000479897 CYP2E1P05181 493 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC12-218ENST00000479897 TMED8Q6PL24 325 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC12-218ENST00000479897 ZGPATQ8N5A5 531 aaKnown RBP15.25■□□□□ 0.03
TRAPPC12-218ENST00000479897 EVI5LQ96CN4 794 aa15.25■□□□□ 0.03
TRAPPC12-218ENST00000479897 DNAJC2Q99543 621 aaKnown RBP15.25■□□□□ 0.03
TRAPPC12-218ENST00000479897 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
TRAPPC12-218ENST00000479897 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
TRAPPC12-218ENST00000479897 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
TRAPPC12-218ENST00000479897 CNTROBQ8N137 903 aa15.24■□□□□ 0.03
TRAPPC12-218ENST00000479897 KBTBD3Q8NAB2 608 aa15.24■□□□□ 0.03
TRAPPC12-218ENST00000479897 SUGT1Q9Y2Z0 365 aa15.24■□□□□ 0.03
TRAPPC12-218ENST00000479897 MYO3BQ8WXR4 1341 aa15.23■□□□□ 0.03
TRAPPC12-218ENST00000479897 GOLIM4O00461 696 aa15.23■□□□□ 0.03
TRAPPC12-218ENST00000479897 GTF2IP78347 998 aa15.23■□□□□ 0.03
TRAPPC12-218ENST00000479897 DACT2Q5SW24 774 aa15.23■□□□□ 0.03
TRAPPC12-218ENST00000479897 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
TRAPPC12-218ENST00000479897 NDUFB9Q9Y6M9 179 aa15.23■□□□□ 0.03
TRAPPC12-218ENST00000479897 VIL1P09327 827 aaKnown RBP15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 SDSP20132 328 aa15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 CHAF1AQ13111 956 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 MFSD14BQ5SR56 506 aa15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 TTLL5Q6EMB2 1281 aa15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 EDC3Q96F86 508 aaKnown RBP15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 ANTXR1Q9H6X2 564 aa15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 PIH1D3Q9NQM4 214 aaKnown RBP15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 RNF181Q9P0P0 153 aa15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 UTRNP46939 3433 aa15.22■□□□□ 0.03
TRAPPC12-218ENST00000479897 MYH2Q9UKX2 1941 aa15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 EIF6P56537 245 aaKnown RBP15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 CXCL9Q07325 125 aa15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 SPTY2D1Q68D10 685 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 CIAPIN1Q6FI81 312 aa15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 CERS5Q8N5B7 392 aa15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 KCNQ5Q9NR82 932 aa15.21■□□□□ 0.03
TRAPPC12-218ENST00000479897 MAST3O60307 1309 aa15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 PSMD14O00487 310 aa15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 MAP4K4O95819 1239 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 PRDX5P30044 214 aa15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 TNIP1Q15025 636 aa15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 LRRFIP1Q32MZ4 808 aaKnown RBP15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 RSBN1LQ6PCB5 846 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 GMLQ99445 158 aa15.2■□□□□ 0.02
TRAPPC12-218ENST00000479897 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.2■□□□□ 0.027e-8■■□□□ 12.3
TRAPPC12-218ENST00000479897 ZNF541Q9H0D2 1346 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 RAD17O75943 681 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 MMP14P50281 582 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 MAP3K12Q12852 859 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 ZSCAN25Q6NSZ9 544 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 TBC1D9Q6ZT07 1266 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 ERICH6Q7L0X2 663 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 AGBL3Q8NEM8 1001 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 FSD1Q9BTV5 496 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 ABCF2Q9UG63 623 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 JAG2Q9Y219 1238 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 ECM29Q5VYK3 1845 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 ADAMTSL1Q8N6G6 1762 aa15.19■□□□□ 0.02
TRAPPC12-218ENST00000479897 HIP1O00291 1037 aa15.18■□□□□ 0.02
TRAPPC12-218ENST00000479897 LDHBP07195 334 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms