RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 CCDC152Q4G0S7 254 aa15.37■□□□□ 0.05
SEC13-216ENST00000479868 PTF1AQ7RTS3 328 aa15.37■□□□□ 0.05
SEC13-216ENST00000479868 TTC6Q86TZ1 520 aa15.37■□□□□ 0.05
SEC13-216ENST00000479868 NSUN7Q8NE18 718 aaKnown RBP15.37■□□□□ 0.05
SEC13-216ENST00000479868 NGLY1Q96IV0 654 aa15.37■□□□□ 0.05
SEC13-216ENST00000479868 WWC3Q9ULE0 1092 aa15.37■□□□□ 0.05
SEC13-216ENST00000479868 COL4A1P02462 1669 aa15.37■□□□□ 0.05
SEC13-216ENST00000479868 ATRNO75882 1429 aa15.37■□□□□ 0.05
SEC13-216ENST00000479868 KRT85P78386 507 aa15.36■□□□□ 0.05
SEC13-216ENST00000479868 CCDC183Q5T5S1 534 aa15.36■□□□□ 0.05
SEC13-216ENST00000479868 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
SEC13-216ENST00000479868 ANP32BQ92688 251 aaKnown RBP15.36■□□□□ 0.05
SEC13-216ENST00000479868 NCOA5Q9HCD5 579 aaKnown RBP15.36■□□□□ 0.05
SEC13-216ENST00000479868 GPHNQ9NQX3 736 aaPredicted RBP15.36■□□□□ 0.05
SEC13-216ENST00000479868 PHF14O94880 888 aa15.36■□□□□ 0.05
SEC13-216ENST00000479868 SLC5A1P13866 664 aa15.36■□□□□ 0.05
SEC13-216ENST00000479868 LLPHQ9BRT6 129 aaKnown RBP15.36■□□□□ 0.05
SEC13-216ENST00000479868 TSPY26PQ9H489 355 aa15.36■□□□□ 0.05
SEC13-216ENST00000479868 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
SEC13-216ENST00000479868 ZNF831Q5JPB2 1677 aa15.36■□□□□ 0.05
SEC13-216ENST00000479868 PDE6AP16499 860 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 PDIA3P30101 505 aaKnown RBP15.35■□□□□ 0.05
SEC13-216ENST00000479868 RASGRF1Q13972 1273 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 UBE3CQ15386 1083 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 VPS72Q15906 364 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 HOMEZQ8IX15 550 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 SPATA5Q8NB90 893 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 NAP1L2Q9ULW6 460 aaPredicted RBP15.35■□□□□ 0.05
SEC13-216ENST00000479868 TCRBV5S4A2TA0A5A2 114 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
SEC13-216ENST00000479868 FBXL16Q8N461 479 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 TRIM44Q96DX7 344 aaPredicted RBP15.35■□□□□ 0.05
SEC13-216ENST00000479868 ZNF274Q96GC6 653 aaPredicted RBP15.35■□□□□ 0.05
SEC13-216ENST00000479868 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 RTL9Q8NET4 1388 aa15.35■□□□□ 0.05
SEC13-216ENST00000479868 PTPDC1A2A3K4 754 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 PPFIA3O75145 1194 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 IGHMBP2P38935 993 aaKnown RBP15.34■□□□□ 0.05
SEC13-216ENST00000479868 FAM184AQ8NB25 1140 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 NBPF3Q9H094 633 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
SEC13-216ENST00000479868 DOCK2Q92608 1830 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 UBAP1LF5GYI3 381 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 ZNF213O14771 459 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 RESTQ13127 1097 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 CLEC4GQ6UXB4 293 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 SALL1Q9NSC2 1324 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 TAF1P21675 1872 aa15.34■□□□□ 0.05
SEC13-216ENST00000479868 H3BQV1 296 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 ELP1O95163 1332 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 EVCP57679 992 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 ANTXR2P58335 489 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 IFFO2Q5TF58 517 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 CASZ1Q86V15 1759 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 PRC1O43663 620 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 MCM5P33992 734 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 BCAMP50895 628 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 CHRNDQ07001 517 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 ERFEQ4G0M1 354 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 C3orf67Q6ZVT6 689 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 NCOA7Q8NI08 942 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 DENND2AQ9ULE3 1009 aa15.33■□□□□ 0.04
SEC13-216ENST00000479868 FOSBP53539 338 aa15.32■□□□□ 0.04
SEC13-216ENST00000479868 HMGN5P82970 282 aaKnown RBP15.32■□□□□ 0.04
SEC13-216ENST00000479868 TAOK2Q9UL54 1235 aa15.32■□□□□ 0.04
SEC13-216ENST00000479868 APPP05067 770 aa15.32■□□□□ 0.04
SEC13-216ENST00000479868 TBC1D10CQ8IV04 446 aa15.32■□□□□ 0.04
SEC13-216ENST00000479868 NKX2-3Q8TAU0 364 aa15.32■□□□□ 0.04
SEC13-216ENST00000479868 PDLIM2Q96JY6 352 aa15.32■□□□□ 0.04
SEC13-216ENST00000479868 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
SEC13-216ENST00000479868 SCAND2PQ9GZW5 306 aaPredicted RBP15.32■□□□□ 0.04
SEC13-216ENST00000479868 ESPNB1AK53 854 aa15.31■□□□□ 0.04
SEC13-216ENST00000479868 BICDL1Q6ZP65 573 aa15.31■□□□□ 0.04
SEC13-216ENST00000479868 RALYLQ86SE5 291 aaKnown RBP15.31■□□□□ 0.04
SEC13-216ENST00000479868 MAGEB6Q8N7X4 407 aa15.31■□□□□ 0.04
SEC13-216ENST00000479868 LEO1Q8WVC0 666 aaPredicted RBP15.31■□□□□ 0.04
SEC13-216ENST00000479868 AIDAQ96BJ3 306 aa15.31■□□□□ 0.04
SEC13-216ENST00000479868 STRBPQ96SI9 672 aaKnown RBP15.31■□□□□ 0.04
SEC13-216ENST00000479868 MYH15Q9Y2K3 1946 aa15.31■□□□□ 0.04
SEC13-216ENST00000479868 CNTNAP4Q9C0A0 1308 aa15.31■□□□□ 0.04
SEC13-216ENST00000479868 LETM1O95202 739 aaPredicted RBP15.31■□□□□ 0.04
SEC13-216ENST00000479868 FNBP4Q8N3X1 1017 aaPredicted RBP15.31■□□□□ 0.04
SEC13-216ENST00000479868 ANO8Q9HCE9 1232 aaPredicted RBP15.31■□□□□ 0.04
SEC13-216ENST00000479868 BTAF1O14981 1849 aa15.3■□□□□ 0.04
SEC13-216ENST00000479868 MAP3K12Q12852 859 aa15.3■□□□□ 0.04
SEC13-216ENST00000479868 FAM182BQ5T319 152 aa15.3■□□□□ 0.04
SEC13-216ENST00000479868 GIMAP6Q6P9H5 292 aa15.3■□□□□ 0.04
SEC13-216ENST00000479868 ZSCAN16Q9H4T2 348 aaPredicted RBP15.3■□□□□ 0.04
SEC13-216ENST00000479868 BCL2L12Q9HB09 334 aa15.3■□□□□ 0.04
SEC13-216ENST00000479868 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
SEC13-216ENST00000479868 KLF18A0A0U1RQI7 1052 aa15.29■□□□□ 0.04
SEC13-216ENST00000479868 FDPSP14324 419 aaKnown RBP15.29■□□□□ 0.04
SEC13-216ENST00000479868 LIG1P18858 919 aa15.29■□□□□ 0.04
SEC13-216ENST00000479868 TBC1D9BQ66K14 1250 aa15.29■□□□□ 0.04
SEC13-216ENST00000479868 NAA16Q6N069 864 aaPredicted RBP15.29■□□□□ 0.04
SEC13-216ENST00000479868 CDC5LQ99459 802 aaKnown RBP15.29■□□□□ 0.04
SEC13-216ENST00000479868 HPS5Q9UPZ3 1129 aa15.29■□□□□ 0.04
SEC13-216ENST00000479868 A0A1B0GUL6 1792 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms