RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CASP8AP2Q9UKL3 1982 aa11.14□□□□□ -0.63
DDX56-211ENST00000479602 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
DDX56-211ENST00000479602 ITGA6P23229 1130 aa11.13□□□□□ -0.63
DDX56-211ENST00000479602 KLRK1P26718 216 aa11.13□□□□□ -0.63
DDX56-211ENST00000479602 TM4SF4P48230 202 aa11.13□□□□□ -0.63
DDX56-211ENST00000479602 SLC4A10Q6U841 1118 aa11.13□□□□□ -0.63
DDX56-211ENST00000479602 RASAL3Q86YV0 1011 aa11.13□□□□□ -0.63
DDX56-211ENST00000479602 ANKRD2Q9GZV1 360 aa11.13□□□□□ -0.63
DDX56-211ENST00000479602 ZNF804BA4D1E1 1349 aa11.12□□□□□ -0.63
DDX56-211ENST00000479602 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
DDX56-211ENST00000479602 LDLRAD1Q5T700 205 aa11.12□□□□□ -0.63
DDX56-211ENST00000479602 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
DDX56-211ENST00000479602 ANKRD44Q8N8A2 993 aa11.12□□□□□ -0.63
DDX56-211ENST00000479602 MTMR14Q8NCE2 650 aa11.12□□□□□ -0.63
DDX56-211ENST00000479602 MEIS3Q99687 375 aa11.12□□□□□ -0.63
DDX56-211ENST00000479602 A0A1B0GUL6 1792 aa11.12□□□□□ -0.63
DDX56-211ENST00000479602 TNRC18O15417 2968 aaPredicted RBP11.12□□□□□ -0.63
DDX56-211ENST00000479602 CCDC85CA6NKD9 419 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 G3V3G9 751 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 TRPA1O75762 1119 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 GNAI2P04899 355 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 IL1R1P14778 569 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 CHRNDQ07001 517 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 FAM161AQ3B820 660 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 NOM1Q5C9Z4 860 aaKnown RBP11.11□□□□□ -0.63
DDX56-211ENST00000479602 EPHA10Q5JZY3 1008 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 PRAMEF18Q5VWM3 479 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 TTLL5Q6EMB2 1281 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 RPAP2Q8IXW5 612 aaPredicted RBP11.11□□□□□ -0.63
DDX56-211ENST00000479602 CERS5Q8N5B7 392 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 CFHR5Q9BXR6 569 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 CD209Q9NNX6 404 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 SCAF8Q9UPN6 1271 aaKnown RBP11.11□□□□□ -0.63
DDX56-211ENST00000479602 PSME4Q14997 1843 aa11.11□□□□□ -0.63
DDX56-211ENST00000479602 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 SNAP23O00161 211 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 IGHMBP2P38935 993 aaKnown RBP11.1□□□□□ -0.63
DDX56-211ENST00000479602 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
DDX56-211ENST00000479602 DGKZQ13574 1117 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 MAP3K11Q16584 847 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 ERICH6BQ5W0A0 696 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 ITPRIPQ8IWB1 547 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 SSH3Q8TE77 659 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 SUCLG2Q96I99 432 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 COPRSQ9NQ92 184 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 TNNQ9UQP3 1299 aa11.1□□□□□ -0.63
DDX56-211ENST00000479602 ZNF646O15015 1829 aaPredicted RBP11.09□□□□□ -0.63
DDX56-211ENST00000479602 CIAO1O76071 339 aa11.09□□□□□ -0.63
DDX56-211ENST00000479602 FKBP1AP62942 108 aaKnown RBP11.09□□□□□ -0.63
DDX56-211ENST00000479602 POLA2Q14181 598 aa11.09□□□□□ -0.63
DDX56-211ENST00000479602 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
DDX56-211ENST00000479602 PANK1Q8TE04 598 aa11.09□□□□□ -0.63
DDX56-211ENST00000479602 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
DDX56-211ENST00000479602 BICC1Q9H694 974 aaKnown RBP11.09□□□□□ -0.63
DDX56-211ENST00000479602 RFX5P48382 616 aaPredicted RBP11.08□□□□□ -0.64
DDX56-211ENST00000479602 GTF2IP78347 998 aa11.08□□□□□ -0.64
DDX56-211ENST00000479602 PTPN12Q05209 780 aaKnown RBP11.08□□□□□ -0.64
DDX56-211ENST00000479602 MPHOSPH8Q99549 860 aa11.08□□□□□ -0.64
DDX56-211ENST00000479602 NOP58Q9Y2X3 529 aaKnown RBP11.08□□□□□ -0.64
DDX56-211ENST00000479602 HTTP42858 3142 aa11.08□□□□□ -0.64
DDX56-211ENST00000479602 ARAP2Q8WZ64 1704 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 UNCXA6NJT0 531 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 TAF5LO75529 589 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 SASH1O94885 1247 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
DDX56-211ENST00000479602 C20orf194Q5TEA3 1177 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 CEP85Q6P2H3 762 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 LMBR1LQ6UX01 489 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 KIAA0825Q8IV33 1275 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 LRRFIP2Q9Y608 721 aaKnown RBP11.07□□□□□ -0.64
DDX56-211ENST00000479602 FAM205AQ6ZU69 1335 aa11.07□□□□□ -0.64
DDX56-211ENST00000479602 PAPPA2Q9BXP8 1791 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 PLIN1O60240 522 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 SLC34A2O95436 690 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 ATP8B2P98198 1209 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 CCDC57Q2TAC2 916 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 CTU1Q7Z7A3 348 aaKnown RBP11.06□□□□□ -0.64
DDX56-211ENST00000479602 HELBQ8NG08 1087 aaPredicted RBP11.06□□□□□ -0.64
DDX56-211ENST00000479602 TDRD7Q8NHU6 1098 aaKnown RBP11.06□□□□□ -0.64
DDX56-211ENST00000479602 PRMT6Q96LA8 375 aaPredicted RBP11.06□□□□□ -0.64
DDX56-211ENST00000479602 DEFB129Q9H1M3 183 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 R3HDMLQ9H3Y0 253 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 COG6Q9Y2V7 657 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 PCDHAC2Q9Y5I4 1007 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 AOX1Q06278 1338 aa11.06□□□□□ -0.64
DDX56-211ENST00000479602 SPDYE2BA6NHP3 402 aa11.05□□□□□ -0.64
DDX56-211ENST00000479602 HMMRO75330 724 aa11.05□□□□□ -0.64
DDX56-211ENST00000479602 TBC1D8O95759 1140 aa11.05□□□□□ -0.64
DDX56-211ENST00000479602 SPDYE6P0CI01 402 aa11.05□□□□□ -0.64
DDX56-211ENST00000479602 SPRYD7Q5W111 196 aa11.05□□□□□ -0.64
DDX56-211ENST00000479602 APOBEC3FQ8IUX4 373 aaKnown RBP11.05□□□□□ -0.64
DDX56-211ENST00000479602 ZNF296Q8WUU4 475 aaPredicted RBP11.05□□□□□ -0.64
DDX56-211ENST00000479602 FAM84BQ96KN1 310 aaPredicted RBP11.05□□□□□ -0.64
DDX56-211ENST00000479602 RIPOR2Q9Y4F9 1068 aa11.05□□□□□ -0.64
DDX56-211ENST00000479602 SUPT16HQ9Y5B9 1047 aaKnown RBP11.05□□□□□ -0.64
DDX56-211ENST00000479602 MROH5Q6ZUA9 1318 aa11.05□□□□□ -0.64
DDX56-211ENST00000479602 MKI67P46013 3256 aaKnown RBP11.04□□□□□ -0.64
DDX56-211ENST00000479602 GPR25O00155 361 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms