RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 KLRK1P26718 216 aa16.92■□□□□ 0.3
ABCF1-206ENST00000479542 CCDC184Q52MB2 194 aa16.92■□□□□ 0.3
ABCF1-206ENST00000479542 FBXO46Q6PJ61 603 aaPredicted RBP16.92■□□□□ 0.3
ABCF1-206ENST00000479542 ZNF804AQ7Z570 1209 aa16.92■□□□□ 0.3
ABCF1-206ENST00000479542 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
ABCF1-206ENST00000479542 MYO1BO43795 1136 aa16.91■□□□□ 0.3
ABCF1-206ENST00000479542 FKTNO75072 461 aa16.91■□□□□ 0.3
ABCF1-206ENST00000479542 SUPT20HL1Q3ZLR7 823 aa16.91■□□□□ 0.3
ABCF1-206ENST00000479542 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
ABCF1-206ENST00000479542 SCAF8Q9UPN6 1271 aaKnown RBP16.91■□□□□ 0.3
ABCF1-206ENST00000479542 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
ABCF1-206ENST00000479542 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
ABCF1-206ENST00000479542 SLC10A4Q96EP9 437 aa16.9■□□□□ 0.3
ABCF1-206ENST00000479542 ANGEL1Q9UNK9 670 aaKnown RBP16.9■□□□□ 0.3
ABCF1-206ENST00000479542 FAM205AQ6ZU69 1335 aa16.9■□□□□ 0.3
ABCF1-206ENST00000479542 SOX10P56693 466 aa16.89■□□□□ 0.29
ABCF1-206ENST00000479542 LDHAL6AQ6ZMR3 332 aa16.89■□□□□ 0.29
ABCF1-206ENST00000479542 LAMB1P07942 1786 aa16.89■□□□□ 0.29
ABCF1-206ENST00000479542 GRM8O00222 908 aa16.88■□□□□ 0.29
ABCF1-206ENST00000479542 TAF5LO75529 589 aa16.88■□□□□ 0.29
ABCF1-206ENST00000479542 ALDH1L1O75891 902 aa16.88■□□□□ 0.29
ABCF1-206ENST00000479542 EXOSC9Q06265 439 aaKnown RBP16.88■□□□□ 0.29
ABCF1-206ENST00000479542 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
ABCF1-206ENST00000479542 CCDC57Q2TAC2 916 aa16.88■□□□□ 0.29
ABCF1-206ENST00000479542 PRPF38BQ5VTL8 546 aaKnown RBP16.88■□□□□ 0.29
ABCF1-206ENST00000479542 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
ABCF1-206ENST00000479542 ECM29Q5VYK3 1845 aa16.87■□□□□ 0.29
ABCF1-206ENST00000479542 TESPA1A2RU30 521 aaPredicted RBP16.87■□□□□ 0.29
ABCF1-206ENST00000479542 CFAP100Q494V2 611 aa16.87■□□□□ 0.29
ABCF1-206ENST00000479542 IFNL1Q8IU54 200 aa16.87■□□□□ 0.29
ABCF1-206ENST00000479542 TDRD7Q8NHU6 1098 aaKnown RBP16.87■□□□□ 0.29
ABCF1-206ENST00000479542 PRMT6Q96LA8 375 aaPredicted RBP16.87■□□□□ 0.29
ABCF1-206ENST00000479542 SNAP23O00161 211 aa16.86■□□□□ 0.29
ABCF1-206ENST00000479542 TNFAIP1Q13829 316 aa16.86■□□□□ 0.29
ABCF1-206ENST00000479542 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
ABCF1-206ENST00000479542 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
ABCF1-206ENST00000479542 HELBQ8NG08 1087 aaPredicted RBP16.86■□□□□ 0.29
ABCF1-206ENST00000479542 WNK4Q96J92 1243 aa16.86■□□□□ 0.29
ABCF1-206ENST00000479542 SERPINA10Q9UK55 444 aa16.86■□□□□ 0.29
ABCF1-206ENST00000479542 F6X3S4 739 aa16.85■□□□□ 0.29
ABCF1-206ENST00000479542 IREB2P48200 963 aaKnown RBP16.85■□□□□ 0.29
ABCF1-206ENST00000479542 ANKRD13AQ8IZ07 590 aa16.85■□□□□ 0.29
ABCF1-206ENST00000479542 MRIQ9BWK5 157 aa16.85■□□□□ 0.29
ABCF1-206ENST00000479542 UTYO14607 1347 aa16.85■□□□□ 0.29
ABCF1-206ENST00000479542 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
ABCF1-206ENST00000479542 USP2O75604 605 aaPredicted RBP16.84■□□□□ 0.29
ABCF1-206ENST00000479542 HDLBPQ00341 1268 aaKnown RBP16.84■□□□□ 0.29
ABCF1-206ENST00000479542 PRKG1Q13976 671 aa16.84■□□□□ 0.29
ABCF1-206ENST00000479542 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
ABCF1-206ENST00000479542 R3HDMLQ9H3Y0 253 aa16.84■□□□□ 0.29
ABCF1-206ENST00000479542 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
ABCF1-206ENST00000479542 CNNM1Q9NRU3 951 aa16.84■□□□□ 0.29
ABCF1-206ENST00000479542 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
ABCF1-206ENST00000479542 A0A1B0GUL6 1792 aa16.83■□□□□ 0.28
ABCF1-206ENST00000479542 ZNF316A6NFI3 1004 aaPredicted RBP16.83■□□□□ 0.28
ABCF1-206ENST00000479542 HIBADHP31937 336 aaKnown RBP16.83■□□□□ 0.28
ABCF1-206ENST00000479542 MKRN3Q13064 507 aaKnown RBP16.83■□□□□ 0.28
ABCF1-206ENST00000479542 RASA3Q14644 834 aa16.83■□□□□ 0.28
ABCF1-206ENST00000479542 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
ABCF1-206ENST00000479542 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
ABCF1-206ENST00000479542 NBPF12Q5TAG4 269 aaPredicted RBP16.83■□□□□ 0.28
ABCF1-206ENST00000479542 FAM84BQ96KN1 310 aaPredicted RBP16.83■□□□□ 0.28
ABCF1-206ENST00000479542 CHMP3Q9Y3E7 222 aa16.83■□□□□ 0.28
ABCF1-206ENST00000479542 RIPOR2Q9Y4F9 1068 aa16.83■□□□□ 0.28
ABCF1-206ENST00000479542 MFSD14BQ5SR56 506 aa16.82■□□□□ 0.28
ABCF1-206ENST00000479542 ERO1AQ96HE7 468 aa16.82■□□□□ 0.28
ABCF1-206ENST00000479542 SRCIN1Q9C0H9 1055 aa16.82■□□□□ 0.28
ABCF1-206ENST00000479542 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
ABCF1-206ENST00000479542 CLRN2A0PK11 232 aa16.81■□□□□ 0.28
ABCF1-206ENST00000479542 IGF2BP3O00425 579 aaKnown RBP eCLIP16.81■□□□□ 0.28
ABCF1-206ENST00000479542 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
ABCF1-206ENST00000479542 FBXO33Q7Z6M2 555 aa16.81■□□□□ 0.28
ABCF1-206ENST00000479542 CLMNQ96JQ2 1002 aa16.81■□□□□ 0.28
ABCF1-206ENST00000479542 ZNF70Q9UC06 446 aaPredicted RBP16.81■□□□□ 0.28
ABCF1-206ENST00000479542 PCDHAC2Q9Y5I4 1007 aa16.81■□□□□ 0.28
ABCF1-206ENST00000479542 ANP32CO43423 234 aa16.8■□□□□ 0.28
ABCF1-206ENST00000479542 OTOP1Q7RTM1 612 aa16.8■□□□□ 0.28
ABCF1-206ENST00000479542 TBC1D22AQ8WUA7 517 aa16.8■□□□□ 0.28
ABCF1-206ENST00000479542 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
ABCF1-206ENST00000479542 ZNF594Q96JF6 807 aaPredicted RBP16.8■□□□□ 0.28
ABCF1-206ENST00000479542 TEPSINQ96N21 525 aa16.8■□□□□ 0.28
ABCF1-206ENST00000479542 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
ABCF1-206ENST00000479542 SUGT1Q9Y2Z0 365 aa16.8■□□□□ 0.28
ABCF1-206ENST00000479542 KIF16BQ96L93 1317 aa16.79■□□□□ 0.28
ABCF1-206ENST00000479542 F8W031 263 aaPredicted RBP16.79■□□□□ 0.28
ABCF1-206ENST00000479542 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
ABCF1-206ENST00000479542 FKBP1CQ5VVH2 108 aa16.79■□□□□ 0.28
ABCF1-206ENST00000479542 DZIP1LQ8IYY4 767 aaKnown RBP16.79■□□□□ 0.28
ABCF1-206ENST00000479542 MS4A4AQ96JQ5 239 aa16.79■□□□□ 0.28
ABCF1-206ENST00000479542 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
ABCF1-206ENST00000479542 TTF2Q9UNY4 1162 aaKnown RBP16.79■□□□□ 0.28
ABCF1-206ENST00000479542 FZD1Q9UP38 647 aa16.79■□□□□ 0.28
ABCF1-206ENST00000479542 PLIN1O60240 522 aa16.78■□□□□ 0.28
ABCF1-206ENST00000479542 GJA5P36382 358 aa16.78■□□□□ 0.28
ABCF1-206ENST00000479542 TNNI2P48788 182 aa16.78■□□□□ 0.28
ABCF1-206ENST00000479542 ARHGEF6Q15052 776 aa16.78■□□□□ 0.28
ABCF1-206ENST00000479542 GCC1Q96CN9 775 aa16.78■□□□□ 0.28
ABCF1-206ENST00000479542 PTPN18Q99952 460 aa16.78■□□□□ 0.28
ABCF1-206ENST00000479542 PTPN22Q9Y2R2 807 aa16.78■□□□□ 0.28
ABCF1-206ENST00000479542 TRIM17Q9Y577 477 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms