RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 RASSF4Q9H2L5 321 aa5.99□□□□□ -1.45
NF1-209ENST00000479536 SH2B1Q9NRF2 756 aaPredicted RBP5.99□□□□□ -1.45
NF1-209ENST00000479536 LEMD3Q9Y2U8 911 aa5.99□□□□□ -1.45
NF1-209ENST00000479536 H3BRB1 525 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 ICMTO60725 284 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 ADAMTSL4Q6UY14 1074 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 FBXL6Q8N531 539 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 GIMAP7Q8NHV1 300 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 GTF3C2Q8WUA4 911 aaPredicted RBP5.98□□□□□ -1.45
NF1-209ENST00000479536 COL26A1Q96A83 441 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 TUT1Q9H6E5 874 aaKnown RBP5.98□□□□□ -1.45
NF1-209ENST00000479536 ANO2Q9NQ90 1003 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 SEC31BQ9NQW1 1179 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 CCDC39Q9UFE4 941 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 SEPT3Q9UH03 358 aa5.98□□□□□ -1.45
NF1-209ENST00000479536 UNCXA6NJT0 531 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 FAM177BA6PVY3 158 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 GAS2O43903 313 aaKnown RBP5.97□□□□□ -1.45
NF1-209ENST00000479536 EPHA1P21709 976 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 FKBP5Q13451 457 aaPredicted RBP5.97□□□□□ -1.45
NF1-209ENST00000479536 COX20Q5RI15 118 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 FDX2Q6P4F2 183 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 GLYCTKQ8IVS8 523 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 TP53INP2Q8IXH6 220 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 MKNK1Q9BUB5 465 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 RNF208Q9H0X6 261 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 HIF3AQ9Y2N7 669 aa5.97□□□□□ -1.45
NF1-209ENST00000479536 UBAP1LF5GYI3 381 aa5.96□□□□□ -1.46
NF1-209ENST00000479536 MAP4P27816 1152 aaKnown RBP5.96□□□□□ -1.46
NF1-209ENST00000479536 RXRBP28702 533 aa5.96□□□□□ -1.46
NF1-209ENST00000479536 MSMPQ1L6U9 139 aa5.96□□□□□ -1.46
NF1-209ENST00000479536 CBLL1Q75N03 491 aa5.96□□□□□ -1.46
NF1-209ENST00000479536 ETFBKMTQ8IXQ9 262 aa5.96□□□□□ -1.46
NF1-209ENST00000479536 OSBPL1AQ9BXW6 950 aa5.96□□□□□ -1.46
NF1-209ENST00000479536 ANKRD33BA6NCL7 494 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 F13BP05160 661 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 FOSL1P15407 271 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 PTPRAP18433 802 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 NLRP12P59046 1061 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 FKBP4Q02790 459 aaKnown RBP eCLIP5.95□□□□□ -1.46
NF1-209ENST00000479536 SF3B2Q13435 895 aaKnown RBP5.95□□□□□ -1.46
NF1-209ENST00000479536 SGO2Q562F6 1265 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 TTC39BQ5VTQ0 682 aaPredicted RBP5.95□□□□□ -1.46
NF1-209ENST00000479536 FBXL18Q96ME1 805 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 RUSC1Q9BVN2 902 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 BCL2L13Q9BXK5 485 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 PBX4Q9BYU1 374 aa5.95□□□□□ -1.46
NF1-209ENST00000479536 ZNF16P17020 682 aaPredicted RBP5.94□□□□□ -1.46
NF1-209ENST00000479536 ECM1Q16610 540 aa5.94□□□□□ -1.46
NF1-209ENST00000479536 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
NF1-209ENST00000479536 VSIG10LQ86VR7 867 aa5.94□□□□□ -1.46
NF1-209ENST00000479536 NPAS4Q8IUM7 802 aa5.94□□□□□ -1.46
NF1-209ENST00000479536 H3BRJ5 948 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 PRNPP04156 253 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 JUNBP17275 347 aaPredicted RBP5.93□□□□□ -1.46
NF1-209ENST00000479536 ITGB5P18084 799 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 MAPK1P28482 360 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 CABP4P57796 275 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 MTMR3Q13615 1198 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 NFXL1Q6ZNB6 911 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 NCAPG2Q86XI2 1143 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 GIPC2Q8TF65 315 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 PIK3R5Q8WYR1 880 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 SAP130Q9H0E3 1048 aa5.93□□□□□ -1.46
NF1-209ENST00000479536 BRD2P25440 801 aaKnown RBP5.92□□□□□ -1.46
NF1-209ENST00000479536 PIP4K2BP78356 416 aa5.92□□□□□ -1.46
NF1-209ENST00000479536 ARHGAP4P98171 946 aa5.92□□□□□ -1.46
NF1-209ENST00000479536 NAA30Q147X3 362 aaPredicted RBP5.92□□□□□ -1.46
NF1-209ENST00000479536 FAM26DQ5JW98 314 aa5.92□□□□□ -1.46
NF1-209ENST00000479536 HELQQ8TDG4 1101 aa5.92□□□□□ -1.46
NF1-209ENST00000479536 SLC7A3Q8WY07 619 aa5.92□□□□□ -1.46
NF1-209ENST00000479536 MRRFQ96E11 262 aaKnown RBP5.92□□□□□ -1.46
NF1-209ENST00000479536 POP1Q99575 1024 aaKnown RBP5.92□□□□□ -1.46
NF1-209ENST00000479536 ADAM19Q9H013 955 aa5.92□□□□□ -1.46
NF1-209ENST00000479536 KIAA1522Q9P206 1035 aaPredicted RBP5.92□□□□□ -1.46
NF1-209ENST00000479536 DCTN4Q9UJW0 460 aa5.92□□□□□ -1.46
NF1-209ENST00000479536 KIF4AO95239 1232 aa5.91□□□□□ -1.46
NF1-209ENST00000479536 CYP2E1P05181 493 aaPredicted RBP5.91□□□□□ -1.46
NF1-209ENST00000479536 COL19A1Q14993 1142 aa5.91□□□□□ -1.46
NF1-209ENST00000479536 ZNF648Q5T619 568 aaPredicted RBP5.91□□□□□ -1.46
NF1-209ENST00000479536 SHISA5Q8N114 240 aa5.91□□□□□ -1.46
NF1-209ENST00000479536 C12orf50Q8NA57 414 aaPredicted RBP5.91□□□□□ -1.46
NF1-209ENST00000479536 FLCNQ8NFG4 579 aa5.91□□□□□ -1.46
NF1-209ENST00000479536 WNT8BQ93098 351 aa5.91□□□□□ -1.46
NF1-209ENST00000479536 ASB16Q96NS5 453 aa5.91□□□□□ -1.46
NF1-209ENST00000479536 OSGEPQ9NPF4 335 aa5.91□□□□□ -1.46
NF1-209ENST00000479536 FAM13BQ9NYF5 915 aa5.91□□□□□ -1.46
NF1-209ENST00000479536 FNDC3AQ9Y2H6 1198 aaKnown RBP5.91□□□□□ -1.46
NF1-209ENST00000479536 CYP26A1O43174 497 aa5.9□□□□□ -1.46
NF1-209ENST00000479536 NFKBIBQ15653 356 aa5.9□□□□□ -1.46
NF1-209ENST00000479536 CPSF6Q16630 551 aaKnown RBP eCLIP5.9□□□□□ -1.46
NF1-209ENST00000479536 ZSCAN29Q8IWY8 852 aaPredicted RBP5.9□□□□□ -1.46
NF1-209ENST00000479536 CEP120Q8N960 986 aa5.9□□□□□ -1.46
NF1-209ENST00000479536 BSDC1Q9NW68 430 aaPredicted RBP5.9□□□□□ -1.46
NF1-209ENST00000479536 ABI2Q9NYB9 513 aaPredicted RBP5.9□□□□□ -1.46
NF1-209ENST00000479536 FAM95CA0A1B0GW59 222 aa5.89□□□□□ -1.47
NF1-209ENST00000479536 FAM13AO94988 1023 aa5.89□□□□□ -1.47
NF1-209ENST00000479536 NPR3P17342 541 aa5.89□□□□□ -1.47
NF1-209ENST00000479536 ZNF124Q15973 351 aa5.89□□□□□ -1.47
NF1-209ENST00000479536 ZNF326Q5BKZ1 582 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms