RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 H7C1D1 291 aa30.76■■■□□ 2.51
PERM1-203ENST00000479361 FKBP1AP62942 108 aaKnown RBP30.76■■■□□ 2.51
PERM1-203ENST00000479361 SEMA3EO15041 775 aa30.75■■■□□ 2.51
PERM1-203ENST00000479361 EPS15P42566 896 aa30.75■■■□□ 2.51
PERM1-203ENST00000479361 PHKA1P46020 1223 aa30.75■■■□□ 2.51
PERM1-203ENST00000479361 HDAC1Q13547 482 aaPredicted RBP30.75■■■□□ 2.51
PERM1-203ENST00000479361 PNMA8AQ86V59 439 aaPredicted RBP30.75■■■□□ 2.51
PERM1-203ENST00000479361 MICALL2Q8IY33 904 aa30.75■■■□□ 2.51
PERM1-203ENST00000479361 CLASRPQ8N2M8 674 aaKnown RBP30.75■■■□□ 2.51
PERM1-203ENST00000479361 GMLQ99445 158 aa30.75■■■□□ 2.51
PERM1-203ENST00000479361 ZBTB22O15209 634 aa30.74■■■□□ 2.51
PERM1-203ENST00000479361 ADARB2Q9NS39 739 aaKnown RBP30.74■■■□□ 2.51
PERM1-203ENST00000479361 CHAF1AQ13111 956 aaPredicted RBP30.73■■■□□ 2.51
PERM1-203ENST00000479361 TBC1D22AQ8WUA7 517 aa30.73■■■□□ 2.51
PERM1-203ENST00000479361 EAF2Q96CJ1 260 aaPredicted RBP30.73■■■□□ 2.51
PERM1-203ENST00000479361 MXD3Q9BW11 206 aa30.73■■■□□ 2.51
PERM1-203ENST00000479361 LRRCC1Q9C099 1032 aa30.73■■■□□ 2.51
PERM1-203ENST00000479361 IL1RAPL2Q9NP60 686 aa30.73■■■□□ 2.51
PERM1-203ENST00000479361 USP17L8P0C7I0 530 aa30.72■■■□□ 2.51
PERM1-203ENST00000479361 MMP14P50281 582 aa30.72■■■□□ 2.51
PERM1-203ENST00000479361 MFSD14BQ5SR56 506 aa30.72■■■□□ 2.51
PERM1-203ENST00000479361 AACSQ86V21 672 aa30.72■■■□□ 2.51
PERM1-203ENST00000479361 OGFOD1Q8N543 542 aa30.72■■■□□ 2.51
PERM1-203ENST00000479361 DENND2AQ9ULE3 1009 aa30.72■■■□□ 2.51
PERM1-203ENST00000479361 JAG2Q9Y219 1238 aa30.72■■■□□ 2.51
PERM1-203ENST00000479361 CCDC158Q5M9N0 1113 aa30.71■■■□□ 2.51
PERM1-203ENST00000479361 USP50Q70EL3 339 aaPredicted RBP30.71■■■□□ 2.51
PERM1-203ENST00000479361 DBNDD2Q9BQY9 259 aa30.71■■■□□ 2.51
PERM1-203ENST00000479361 UQCRFS1P1P0C7P4 283 aa30.7■■■□□ 2.51
PERM1-203ENST00000479361 WDR66Q8TBY9 1149 aa30.7■■■□□ 2.51
PERM1-203ENST00000479361 CCDC8Q9H0W5 538 aaPredicted RBP30.7■■■□□ 2.51
PERM1-203ENST00000479361 RWDD1Q9H446 243 aaPredicted RBP30.7■■■□□ 2.51
PERM1-203ENST00000479361 ZNF646O15015 1829 aaPredicted RBP30.69■■■□□ 2.5
PERM1-203ENST00000479361 TOMM70O94826 608 aa30.69■■■□□ 2.5
PERM1-203ENST00000479361 ZNF280AP59817 542 aaPredicted RBP30.69■■■□□ 2.5
PERM1-203ENST00000479361 EAPPQ56P03 285 aaPredicted RBP30.69■■■□□ 2.5
PERM1-203ENST00000479361 CERS5Q8N5B7 392 aa30.69■■■□□ 2.5
PERM1-203ENST00000479361 DBNLQ9UJU6 430 aaKnown RBP30.69■■■□□ 2.5
PERM1-203ENST00000479361 HDAC9Q9UKV0 1011 aa30.69■■■□□ 2.5
PERM1-203ENST00000479361 IFIT2P09913 472 aaKnown RBP30.68■■■□□ 2.5
PERM1-203ENST00000479361 TTC39AQ5SRH9 613 aa30.68■■■□□ 2.5
PERM1-203ENST00000479361 KIAA0825Q8IV33 1275 aa30.68■■■□□ 2.5
PERM1-203ENST00000479361 PDS5AQ29RF7 1337 aaKnown RBP30.68■■■□□ 2.5
PERM1-203ENST00000479361 SHTN1A0MZ66 631 aa30.67■■■□□ 2.5
PERM1-203ENST00000479361 ARID4AP29374 1257 aaPredicted RBP30.67■■■□□ 2.5
PERM1-203ENST00000479361 RASGRF1Q13972 1273 aa30.67■■■□□ 2.5
PERM1-203ENST00000479361 GCC1Q96CN9 775 aa30.67■■■□□ 2.5
PERM1-203ENST00000479361 LDHDQ86WU2 507 aa30.66■■■□□ 2.5
PERM1-203ENST00000479361 RBM46Q8TBY0 533 aaKnown RBP30.66■■■□□ 2.5
PERM1-203ENST00000479361 TLR7Q9NYK1 1049 aaKnown RBP30.66■■■□□ 2.5
PERM1-203ENST00000479361 ZNF512BQ96KM6 892 aaPredicted RBP30.65■■■□□ 2.5
PERM1-203ENST00000479361 BCL11AQ9H165 835 aa30.65■■■□□ 2.5
PERM1-203ENST00000479361 SUGT1Q9Y2Z0 365 aa30.65■■■□□ 2.5
PERM1-203ENST00000479361 COL1A1P02452 1464 aaPredicted RBP30.64■■■□□ 2.5
PERM1-203ENST00000479361 TBC1D10BQ4KMP7 808 aaPredicted RBP30.64■■■□□ 2.5
PERM1-203ENST00000479361 SAMD7Q7Z3H4 446 aa30.64■■■□□ 2.5
PERM1-203ENST00000479361 ZGPATQ8N5A5 531 aaKnown RBP30.64■■■□□ 2.5
PERM1-203ENST00000479361 MYOZ2Q9NPC6 264 aa30.64■■■□□ 2.5
PERM1-203ENST00000479361 ZBTB47Q9UFB7 747 aaPredicted RBP30.64■■■□□ 2.5
PERM1-203ENST00000479361 CLEC11AQ9Y240 323 aa30.64■■■□□ 2.5
PERM1-203ENST00000479361 MYH13Q9UKX3 1938 aa30.63■■■□□ 2.49
PERM1-203ENST00000479361 KIF4BQ2VIQ3 1234 aa30.63■■■□□ 2.49
PERM1-203ENST00000479361 SPATA5Q8NB90 893 aa30.63■■■□□ 2.49
PERM1-203ENST00000479361 TRPM4Q8TD43 1214 aa30.63■■■□□ 2.49
PERM1-203ENST00000479361 SALL1Q9NSC2 1324 aa30.63■■■□□ 2.49
PERM1-203ENST00000479361 F8W031 263 aaPredicted RBP30.62■■■□□ 2.49
PERM1-203ENST00000479361 RBM26Q5T8P6 1007 aaKnown RBP30.62■■■□□ 2.49
PERM1-203ENST00000479361 SMC1BQ8NDV3 1235 aa30.62■■■□□ 2.49
PERM1-203ENST00000479361 HMG20BQ9P0W2 317 aa30.62■■■□□ 2.49
PERM1-203ENST00000479361 SMARCA5O60264 1052 aaPredicted RBP30.61■■■□□ 2.49
PERM1-203ENST00000479361 ZC3H15Q8WU90 426 aaKnown RBP30.61■■■□□ 2.49
PERM1-203ENST00000479361 TTF2Q9UNY4 1162 aaKnown RBP30.61■■■□□ 2.49
PERM1-203ENST00000479361 MAST3O60307 1309 aa30.6■■■□□ 2.49
PERM1-203ENST00000479361 NEFLP07196 543 aa30.6■■■□□ 2.49
PERM1-203ENST00000479361 POTEIP0CG38 1075 aa30.6■■■□□ 2.49
PERM1-203ENST00000479361 POTEJP0CG39 1038 aa30.6■■■□□ 2.49
PERM1-203ENST00000479361 MCAMP43121 646 aa30.6■■■□□ 2.49
PERM1-203ENST00000479361 CHADLQ6NUI6 762 aa30.6■■■□□ 2.49
PERM1-203ENST00000479361 HIRAP54198 1017 aaPredicted RBP30.59■■■□□ 2.49
PERM1-203ENST00000479361 FSTL1Q12841 308 aa30.59■■■□□ 2.49
PERM1-203ENST00000479361 EGFRP00533 1210 aa30.58■■■□□ 2.49
PERM1-203ENST00000479361 SCARF1Q14162 830 aa30.58■■■□□ 2.49
PERM1-203ENST00000479361 SPTY2D1Q68D10 685 aaPredicted RBP30.58■■■□□ 2.49
PERM1-203ENST00000479361 IGHDP01880 384 aa30.57■■■□□ 2.48
PERM1-203ENST00000479361 LDHBP07195 334 aaKnown RBP30.57■■■□□ 2.48
PERM1-203ENST00000479361 ANKRD45Q5TZF3 282 aa30.57■■■□□ 2.48
PERM1-203ENST00000479361 SMC5Q8IY18 1101 aa30.57■■■□□ 2.48
PERM1-203ENST00000479361 SERPINA10Q9UK55 444 aa30.57■■■□□ 2.48
PERM1-203ENST00000479361 ADAMTSL1Q8N6G6 1762 aa30.56■■■□□ 2.48
PERM1-203ENST00000479361 HDLBPQ00341 1268 aaKnown RBP30.56■■■□□ 2.48
PERM1-203ENST00000479361 DLGAP5Q15398 846 aa30.56■■■□□ 2.48
PERM1-203ENST00000479361 GRIK5Q16478 980 aa30.56■■■□□ 2.48
PERM1-203ENST00000479361 PI16Q6UXB8 463 aa30.56■■■□□ 2.48
PERM1-203ENST00000479361 MTMR14Q8NCE2 650 aa30.56■■■□□ 2.48
PERM1-203ENST00000479361 ABCF2Q9UG63 623 aa30.56■■■□□ 2.48
PERM1-203ENST00000479361 GPATCH3Q96I76 525 aa30.55■■■□□ 2.48
PERM1-203ENST00000479361 MRIQ9BWK5 157 aa30.55■■■□□ 2.48
PERM1-203ENST00000479361 PGAP2Q9UHJ9 254 aa30.55■■■□□ 2.48
PERM1-203ENST00000479361 PRDX5P30044 214 aa30.54■■■□□ 2.48
PERM1-203ENST00000479361 RBM5P52756 815 aaKnown RBP eCLIP30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms