RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 TBC1D22AQ8WUA7 517 aa17.17■□□□□ 0.34
PCIF1-202ENST00000479348 GMLQ99445 158 aa17.17■□□□□ 0.34
PCIF1-202ENST00000479348 RRAGCQ9HB90 399 aa17.17■□□□□ 0.34
PCIF1-202ENST00000479348 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
PCIF1-202ENST00000479348 NMRK2Q9NPI5 230 aa17.17■□□□□ 0.34
PCIF1-202ENST00000479348 GPRC5DQ9NZD1 345 aa17.17■□□□□ 0.34
PCIF1-202ENST00000479348 DENND2AQ9ULE3 1009 aa17.17■□□□□ 0.34
PCIF1-202ENST00000479348 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
PCIF1-202ENST00000479348 POTECB2RU33 542 aa17.16■□□□□ 0.34
PCIF1-202ENST00000479348 UQCRFS1P1P0C7P4 283 aa17.16■□□□□ 0.34
PCIF1-202ENST00000479348 AACSQ86V21 672 aa17.16■□□□□ 0.34
PCIF1-202ENST00000479348 WDR66Q8TBY9 1149 aa17.16■□□□□ 0.34
PCIF1-202ENST00000479348 FBXW7Q969H0 707 aa17.16■□□□□ 0.34
PCIF1-202ENST00000479348 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
PCIF1-202ENST00000479348 ZBTB12Q9Y330 459 aaPredicted RBP17.16■□□□□ 0.34
PCIF1-202ENST00000479348 SCN4AP35499 1836 aa17.15■□□□□ 0.34
PCIF1-202ENST00000479348 H7C1D1 291 aa17.15■□□□□ 0.34
PCIF1-202ENST00000479348 IFIT2P09913 472 aaKnown RBP17.15■□□□□ 0.34
PCIF1-202ENST00000479348 ARID4AP29374 1257 aaPredicted RBP17.15■□□□□ 0.34
PCIF1-202ENST00000479348 DBNDD2Q9BQY9 259 aa17.15■□□□□ 0.34
PCIF1-202ENST00000479348 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
PCIF1-202ENST00000479348 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
PCIF1-202ENST00000479348 IQSEC3Q9UPP2 1182 aaPredicted RBP17.15■□□□□ 0.34
PCIF1-202ENST00000479348 EPHX2P34913 555 aa17.14■□□□□ 0.33
PCIF1-202ENST00000479348 MFSD14BQ5SR56 506 aa17.14■□□□□ 0.33
PCIF1-202ENST00000479348 PNMA8AQ86V59 439 aaPredicted RBP17.14■□□□□ 0.33
PCIF1-202ENST00000479348 OGFOD1Q8N543 542 aa17.14■□□□□ 0.33
PCIF1-202ENST00000479348 CCDC8Q9H0W5 538 aaPredicted RBP17.14■□□□□ 0.33
PCIF1-202ENST00000479348 TAF1DQ9H5J8 278 aaPredicted RBP17.14■□□□□ 0.33
PCIF1-202ENST00000479348 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
PCIF1-202ENST00000479348 SUGT1Q9Y2Z0 365 aa17.14■□□□□ 0.33
PCIF1-202ENST00000479348 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
PCIF1-202ENST00000479348 EPS15P42566 896 aa17.13■□□□□ 0.33
PCIF1-202ENST00000479348 CHAF1AQ13111 956 aaPredicted RBP17.13■□□□□ 0.33
PCIF1-202ENST00000479348 TTC39AQ5SRH9 613 aa17.13■□□□□ 0.33
PCIF1-202ENST00000479348 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
PCIF1-202ENST00000479348 MICALL2Q8IY33 904 aa17.13■□□□□ 0.33
PCIF1-202ENST00000479348 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
PCIF1-202ENST00000479348 HDAC9Q9UKV0 1011 aa17.13■□□□□ 0.33
PCIF1-202ENST00000479348 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
PCIF1-202ENST00000479348 KIF3CO14782 793 aa17.12■□□□□ 0.33
PCIF1-202ENST00000479348 IGHDP01880 384 aa17.12■□□□□ 0.33
PCIF1-202ENST00000479348 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
PCIF1-202ENST00000479348 RASGRF1Q13972 1273 aa17.12■□□□□ 0.33
PCIF1-202ENST00000479348 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
PCIF1-202ENST00000479348 C16orf71Q8IYS4 520 aaPredicted RBP17.12■□□□□ 0.33
PCIF1-202ENST00000479348 CERS5Q8N5B7 392 aa17.12■□□□□ 0.33
PCIF1-202ENST00000479348 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
PCIF1-202ENST00000479348 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
PCIF1-202ENST00000479348 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
PCIF1-202ENST00000479348 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
PCIF1-202ENST00000479348 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
PCIF1-202ENST00000479348 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
PCIF1-202ENST00000479348 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
PCIF1-202ENST00000479348 HMG20BQ9P0W2 317 aa17.1■□□□□ 0.33
PCIF1-202ENST00000479348 JAG2Q9Y219 1238 aa17.1■□□□□ 0.33
PCIF1-202ENST00000479348 MAST3O60307 1309 aa17.09■□□□□ 0.33
PCIF1-202ENST00000479348 IGSF3O75054 1194 aa17.09■□□□□ 0.33
PCIF1-202ENST00000479348 MCAMP43121 646 aa17.09■□□□□ 0.33
PCIF1-202ENST00000479348 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
PCIF1-202ENST00000479348 ERICH6BQ5W0A0 696 aa17.09■□□□□ 0.33
PCIF1-202ENST00000479348 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
PCIF1-202ENST00000479348 KIAA0825Q8IV33 1275 aa17.09■□□□□ 0.33
PCIF1-202ENST00000479348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.09■□□□□ 0.33
PCIF1-202ENST00000479348 GPATCH3Q96I76 525 aa17.09■□□□□ 0.33
PCIF1-202ENST00000479348 MRIQ9BWK5 157 aa17.09■□□□□ 0.33
PCIF1-202ENST00000479348 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.33
PCIF1-202ENST00000479348 MYH13Q9UKX3 1938 aa17.08■□□□□ 0.32
PCIF1-202ENST00000479348 TOMM70O94826 608 aa17.08■□□□□ 0.32
PCIF1-202ENST00000479348 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
PCIF1-202ENST00000479348 MYOZ2Q9NPC6 264 aa17.08■□□□□ 0.32
PCIF1-202ENST00000479348 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
PCIF1-202ENST00000479348 ATP5JP18859 108 aa17.07■□□□□ 0.32
PCIF1-202ENST00000479348 SCARF1Q14162 830 aa17.07■□□□□ 0.32
PCIF1-202ENST00000479348 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
PCIF1-202ENST00000479348 EAPPQ56P03 285 aaPredicted RBP17.07■□□□□ 0.32
PCIF1-202ENST00000479348 LDHDQ86WU2 507 aa17.07■□□□□ 0.32
PCIF1-202ENST00000479348 MTMR14Q8NCE2 650 aa17.07■□□□□ 0.32
PCIF1-202ENST00000479348 RBM46Q8TBY0 533 aaKnown RBP17.07■□□□□ 0.32
PCIF1-202ENST00000479348 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
PCIF1-202ENST00000479348 SERPINA10Q9UK55 444 aa17.07■□□□□ 0.32
PCIF1-202ENST00000479348 TTF2Q9UNY4 1162 aaKnown RBP17.07■□□□□ 0.32
PCIF1-202ENST00000479348 SHTN1A0MZ66 631 aa17.06■□□□□ 0.32
PCIF1-202ENST00000479348 NUCB1Q02818 461 aa17.06■□□□□ 0.32
PCIF1-202ENST00000479348 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
PCIF1-202ENST00000479348 ECHDC1Q9NTX5 307 aa17.06■□□□□ 0.32
PCIF1-202ENST00000479348 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
PCIF1-202ENST00000479348 DLGAP5Q15398 846 aa17.05■□□□□ 0.32
PCIF1-202ENST00000479348 TBC1D10BQ4KMP7 808 aaPredicted RBP17.05■□□□□ 0.32
PCIF1-202ENST00000479348 PI16Q6UXB8 463 aa17.05■□□□□ 0.32
PCIF1-202ENST00000479348 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
PCIF1-202ENST00000479348 ABCF2Q9UG63 623 aa17.05■□□□□ 0.32
PCIF1-202ENST00000479348 PGAP2Q9UHJ9 254 aa17.05■□□□□ 0.32
PCIF1-202ENST00000479348 TTC41PQ6P2S7 1318 aa17.05■□□□□ 0.32
PCIF1-202ENST00000479348 PRDX5P30044 214 aa17.04■□□□□ 0.32
PCIF1-202ENST00000479348 ZAP70P43403 619 aa17.04■□□□□ 0.32
PCIF1-202ENST00000479348 HIRAP54198 1017 aaPredicted RBP17.04■□□□□ 0.32
PCIF1-202ENST00000479348 TTF1Q15361 905 aaPredicted RBP17.04■□□□□ 0.32
PCIF1-202ENST00000479348 RBM26Q5T8P6 1007 aaKnown RBP17.04■□□□□ 0.32
PCIF1-202ENST00000479348 HHIPL2Q6UWX4 724 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms