RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 USP17L1Q7RTZ2 530 aa18.74■□□□□ 0.59
COL16A1-211ENST00000479100 FBXO33Q7Z6M2 555 aa18.74■□□□□ 0.59
COL16A1-211ENST00000479100 IQSEC3Q9UPP2 1182 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-211ENST00000479100 RAB11FIP3O75154 756 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 LMOD1P29536 600 aaPredicted RBP18.73■□□□□ 0.59
COL16A1-211ENST00000479100 GTF2IP78347 998 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 TNNI3KQ59H18 835 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 USP50Q70EL3 339 aaPredicted RBP18.73■□□□□ 0.59
COL16A1-211ENST00000479100 RHPN1Q8TCX5 695 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 XAGE2Q96GT9 111 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 GPRC5DQ9NZD1 345 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 JAG2Q9Y219 1238 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 FPGT-TNNI3KV9GXZ4 949 aa18.73■□□□□ 0.59
COL16A1-211ENST00000479100 IL1R1P14778 569 aa18.72■□□□□ 0.59
COL16A1-211ENST00000479100 TTLL5Q6EMB2 1281 aa18.72■□□□□ 0.59
COL16A1-211ENST00000479100 KIF1BPQ96EK5 621 aa18.72■□□□□ 0.59
COL16A1-211ENST00000479100 GPR108Q9NPR9 543 aa18.72■□□□□ 0.59
COL16A1-211ENST00000479100 ZBTB12Q9Y330 459 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-211ENST00000479100 NEFLP07196 543 aa18.71■□□□□ 0.59
COL16A1-211ENST00000479100 GMPSP49915 693 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-211ENST00000479100 CHAF1AQ13111 956 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-211ENST00000479100 TDRD7Q8NHU6 1098 aaKnown RBP18.71■□□□□ 0.59
COL16A1-211ENST00000479100 CCDC8Q9H0W5 538 aaPredicted RBP18.71■□□□□ 0.59
COL16A1-211ENST00000479100 DCTPP1Q9H773 170 aa18.71■□□□□ 0.59
COL16A1-211ENST00000479100 GNL3LQ9NVN8 582 aaKnown RBP18.71■□□□□ 0.59
COL16A1-211ENST00000479100 ZNF609O15014 1411 aa18.71■□□□□ 0.59
COL16A1-211ENST00000479100 RASSF10A6NK89 507 aa18.7■□□□□ 0.58
COL16A1-211ENST00000479100 VIL1P09327 827 aaKnown RBP18.7■□□□□ 0.58
COL16A1-211ENST00000479100 PHKA1P46020 1223 aa18.7■□□□□ 0.58
COL16A1-211ENST00000479100 STRIP1Q5VSL9 837 aa18.7■□□□□ 0.58
COL16A1-211ENST00000479100 AACSQ86V21 672 aa18.7■□□□□ 0.58
COL16A1-211ENST00000479100 MXD3Q9BW11 206 aa18.7■□□□□ 0.58
COL16A1-211ENST00000479100 RWDD1Q9H446 243 aaPredicted RBP18.7■□□□□ 0.58
COL16A1-211ENST00000479100 ADARB2Q9NS39 739 aaKnown RBP18.7■□□□□ 0.58
COL16A1-211ENST00000479100 VEGFBP49765 207 aa18.69■□□□□ 0.58
COL16A1-211ENST00000479100 FMR1Q06787 632 aaKnown RBP eCLIP18.69■□□□□ 0.58
COL16A1-211ENST00000479100 CCDC102BQ68D86 513 aa18.69■□□□□ 0.58
COL16A1-211ENST00000479100 RSBN1LQ6PCB5 846 aaPredicted RBP18.69■□□□□ 0.58
COL16A1-211ENST00000479100 CLASRPQ8N2M8 674 aaKnown RBP18.69■□□□□ 0.58
COL16A1-211ENST00000479100 EAF2Q96CJ1 260 aaPredicted RBP18.69■□□□□ 0.58
COL16A1-211ENST00000479100 DBNDD2Q9BQY9 259 aa18.69■□□□□ 0.58
COL16A1-211ENST00000479100 LRRCC1Q9C099 1032 aa18.69■□□□□ 0.58
COL16A1-211ENST00000479100 SCN9AQ15858 1988 aa18.68■□□□□ 0.58
COL16A1-211ENST00000479100 SMARCA5O60264 1052 aaPredicted RBP18.68■□□□□ 0.58
COL16A1-211ENST00000479100 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
COL16A1-211ENST00000479100 DACT2Q5SW24 774 aa18.68■□□□□ 0.58
COL16A1-211ENST00000479100 PGAP2Q9UHJ9 254 aa18.68■□□□□ 0.58
COL16A1-211ENST00000479100 IFIT2P09913 472 aaKnown RBP18.67■□□□□ 0.58
COL16A1-211ENST00000479100 HIRAP54198 1017 aaPredicted RBP18.67■□□□□ 0.58
COL16A1-211ENST00000479100 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
COL16A1-211ENST00000479100 CNOT7Q9UIV1 285 aaKnown RBP18.67■□□□□ 0.58
COL16A1-211ENST00000479100 RPS12P25398 132 aaKnown RBP18.66■□□□□ 0.58
COL16A1-211ENST00000479100 CCDC158Q5M9N0 1113 aa18.66■□□□□ 0.58
COL16A1-211ENST00000479100 TTC39AQ5SRH9 613 aa18.66■□□□□ 0.58
COL16A1-211ENST00000479100 CST9Q5W186 159 aa18.66■□□□□ 0.58
COL16A1-211ENST00000479100 ZBTB47Q9UFB7 747 aaPredicted RBP18.66■□□□□ 0.58
COL16A1-211ENST00000479100 DBNLQ9UJU6 430 aaKnown RBP18.66■□□□□ 0.58
COL16A1-211ENST00000479100 FAM205AQ6ZU69 1335 aa18.66■□□□□ 0.58
COL16A1-211ENST00000479100 SHTN1A0MZ66 631 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 H7C1D1 291 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 TRAF5O00463 557 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 IGHDP01880 384 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 DEFB115Q30KQ5 88 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 MICALL2Q8IY33 904 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 AGBL3Q8NEM8 1001 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 DPF2Q92785 391 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 DENND2AQ9ULE3 1009 aa18.65■□□□□ 0.58
COL16A1-211ENST00000479100 F8W031 263 aaPredicted RBP18.64■□□□□ 0.57
COL16A1-211ENST00000479100 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
COL16A1-211ENST00000479100 MFSD14BQ5SR56 506 aa18.64■□□□□ 0.57
COL16A1-211ENST00000479100 ANKRD45Q5TZF3 282 aa18.64■□□□□ 0.57
COL16A1-211ENST00000479100 KIAA0825Q8IV33 1275 aa18.64■□□□□ 0.57
COL16A1-211ENST00000479100 ZC3H15Q8WU90 426 aaKnown RBP18.64■□□□□ 0.57
COL16A1-211ENST00000479100 GCC1Q96CN9 775 aa18.64■□□□□ 0.57
COL16A1-211ENST00000479100 MYO3BQ8WXR4 1341 aa18.64■□□□□ 0.57
COL16A1-211ENST00000479100 ARAP2Q8WZ64 1704 aa18.63■□□□□ 0.57
COL16A1-211ENST00000479100 SEMA3EO15041 775 aa18.63■□□□□ 0.57
COL16A1-211ENST00000479100 USP17L8P0C7I0 530 aa18.63■□□□□ 0.57
COL16A1-211ENST00000479100 RASGRF1Q13972 1273 aa18.63■□□□□ 0.57
COL16A1-211ENST00000479100 RBM26Q5T8P6 1007 aaKnown RBP18.63■□□□□ 0.57
COL16A1-211ENST00000479100 CERS5Q8N5B7 392 aa18.63■□□□□ 0.57
COL16A1-211ENST00000479100 TRPM4Q8TD43 1214 aa18.63■□□□□ 0.57
COL16A1-211ENST00000479100 GMLQ99445 158 aa18.63■□□□□ 0.57
COL16A1-211ENST00000479100 WBP1LQ9NX94 342 aa18.63■□□□□ 0.57
COL16A1-211ENST00000479100 FOXN1O15353 648 aa18.62■□□□□ 0.57
COL16A1-211ENST00000479100 TBC1D10BQ4KMP7 808 aaPredicted RBP18.62■□□□□ 0.57
COL16A1-211ENST00000479100 B4GALNT3Q6L9W6 998 aa18.62■□□□□ 0.57
COL16A1-211ENST00000479100 OGFOD1Q8N543 542 aa18.62■□□□□ 0.57
COL16A1-211ENST00000479100 WDR66Q8TBY9 1149 aa18.62■□□□□ 0.57
COL16A1-211ENST00000479100 TBC1D22AQ8WUA7 517 aa18.62■□□□□ 0.57
COL16A1-211ENST00000479100 WDR33Q9C0J8 1336 aaKnown RBP18.61■□□□□ 0.57
COL16A1-211ENST00000479100 ARID4AP29374 1257 aaPredicted RBP18.61■□□□□ 0.57
COL16A1-211ENST00000479100 FKBP1AP62942 108 aaKnown RBP18.61■□□□□ 0.57
COL16A1-211ENST00000479100 SCARF1Q14162 830 aa18.61■□□□□ 0.57
COL16A1-211ENST00000479100 SAMD7Q7Z3H4 446 aa18.61■□□□□ 0.57
COL16A1-211ENST00000479100 TNS4Q8IZW8 715 aa18.61■□□□□ 0.57
COL16A1-211ENST00000479100 SPATA5Q8NB90 893 aa18.61■□□□□ 0.57
COL16A1-211ENST00000479100 GLIS2Q9BZE0 524 aaPredicted RBP18.61■□□□□ 0.57
COL16A1-211ENST00000479100 SNRKQ9NRH2 765 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms